RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 CADPS2Q86UW7 1296 aa6.49□□□□□ -1.37
SYCP1-210ENST00000618516 SPATA31E1Q6ZUB1 1445 aa6.49□□□□□ -1.37
SYCP1-210ENST00000618516 NEURL4Q96JN8 1562 aa6.48□□□□□ -1.37
SYCP1-210ENST00000618516 CCDC9Q9Y3X0 531 aaKnown RBP6.48□□□□□ -1.37
SYCP1-210ENST00000618516 HRCP23327 699 aa6.48□□□□□ -1.37
SYCP1-210ENST00000618516 RPGRIP1LQ68CZ1 1315 aa6.48□□□□□ -1.37
SYCP1-210ENST00000618516 FBLN1P23142 703 aa6.47□□□□□ -1.37
SYCP1-210ENST00000618516 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
SYCP1-210ENST00000618516 CDK19Q9BWU1 502 aa6.47□□□□□ -1.37
SYCP1-210ENST00000618516 DISP3Q9P2K9 1392 aa6.47□□□□□ -1.37
SYCP1-210ENST00000618516 IQGAP1P46940 1657 aa6.47□□□□□ -1.37
SYCP1-210ENST00000618516 BRINP3Q76B58 766 aa6.47□□□□□ -1.37
SYCP1-210ENST00000618516 PPM1GO15355 546 aaPredicted RBP6.47□□□□□ -1.37
SYCP1-210ENST00000618516 CABP1Q9NZU7 370 aa6.47□□□□□ -1.37
SYCP1-210ENST00000618516 CENPJQ9HC77 1338 aaPredicted RBP6.47□□□□□ -1.37
SYCP1-210ENST00000618516 YTHDC2Q9H6S0 1430 aaKnown RBP6.47□□□□□ -1.37
SYCP1-210ENST00000618516 KIF1BO60333 1816 aa6.46□□□□□ -1.37
SYCP1-210ENST00000618516 SENP3-EIF4A1A0A087X0R7 540 aa6.46□□□□□ -1.37
SYCP1-210ENST00000618516 ZC3H6P61129 1189 aaKnown RBP6.46□□□□□ -1.37
SYCP1-210ENST00000618516 NEXMIFQ5QGS0 1516 aa6.46□□□□□ -1.38
SYCP1-210ENST00000618516 LRRC7Q96NW7 1537 aa6.46□□□□□ -1.38
SYCP1-210ENST00000618516 SLC12A5Q9H2X9 1139 aa6.46□□□□□ -1.38
SYCP1-210ENST00000618516 ARHGAP23Q9P227 1491 aa6.46□□□□□ -1.38
SYCP1-210ENST00000618516 SLIT1O75093 1534 aa6.45□□□□□ -1.38
SYCP1-210ENST00000618516 CHRNA2Q15822 529 aa6.45□□□□□ -1.38
SYCP1-210ENST00000618516 NUDT16Q96DE0 195 aaKnown RBP6.45□□□□□ -1.38
SYCP1-210ENST00000618516 PHF8Q9UPP1 1060 aa6.45□□□□□ -1.38
SYCP1-210ENST00000618516 HSPA5P11021 654 aaKnown RBP6.44□□□□□ -1.38
SYCP1-210ENST00000618516 ZRANB1Q9UGI0 708 aa6.44□□□□□ -1.38
SYCP1-210ENST00000618516 ALKQ9UM73 1620 aa6.44□□□□□ -1.38
SYCP1-210ENST00000618516 PIK3C2GO75747 1445 aa6.44□□□□□ -1.38
SYCP1-210ENST00000618516 WASLO00401 505 aaPredicted RBP6.44□□□□□ -1.38
SYCP1-210ENST00000618516 LTV1Q96GA3 475 aaPredicted RBP6.44□□□□□ -1.38
SYCP1-210ENST00000618516 NGLY1Q96IV0 654 aa6.44□□□□□ -1.38
SYCP1-210ENST00000618516 KRT28Q7Z3Y7 464 aa6.43□□□□□ -1.38
SYCP1-210ENST00000618516 ABTB2Q8N961 1025 aa6.43□□□□□ -1.38
SYCP1-210ENST00000618516 STRN4Q9NRL3 753 aa6.43□□□□□ -1.38
SYCP1-210ENST00000618516 PRR36Q9H6K5 1346 aa6.43□□□□□ -1.38
SYCP1-210ENST00000618516 POLR1AO95602 1720 aaPredicted RBP6.43□□□□□ -1.38
SYCP1-210ENST00000618516 ZNF142P52746 1687 aaPredicted RBP6.43□□□□□ -1.38
SYCP1-210ENST00000618516 PRAG1Q86YV5 1406 aa6.43□□□□□ -1.38
SYCP1-210ENST00000618516 STRCP1A6NGW2 1772 aa6.42□□□□□ -1.38
SYCP1-210ENST00000618516 EIF4G2P78344 907 aaKnown RBP eCLIP6.42□□□□□ -1.38
SYCP1-210ENST00000618516 LRPPRCP42704 1394 aaKnown RBP6.42□□□□□ -1.38
SYCP1-210ENST00000618516 USP47Q96K76 1375 aa6.42□□□□□ -1.38
SYCP1-210ENST00000618516 MED14O60244 1454 aa6.42□□□□□ -1.38
SYCP1-210ENST00000618516 LTBP4Q8N2S1 1624 aa6.42□□□□□ -1.38
SYCP1-210ENST00000618516 NLRP6P59044 892 aa6.42□□□□□ -1.38
SYCP1-210ENST00000618516 FAM182BQ5T319 152 aa6.42□□□□□ -1.38
SYCP1-210ENST00000618516 ACEP12821 1306 aa6.42□□□□□ -1.38
SYCP1-210ENST00000618516 ACIN1Q9UKV3 1341 aaKnown RBP6.41□□□□□ -1.38
SYCP1-210ENST00000618516 GGNBP2Q9H3C7 697 aa6.41□□□□□ -1.38
SYCP1-210ENST00000618516 CCDC61Q9Y6R9 512 aa6.41□□□□□ -1.38
SYCP1-210ENST00000618516 EVC2Q86UK5 1308 aa6.4□□□□□ -1.38
SYCP1-210ENST00000618516 C11orf95C9JLR9 678 aaPredicted RBP6.4□□□□□ -1.39
SYCP1-210ENST00000618516 CC2D1BQ5T0F9 858 aaKnown RBP6.4□□□□□ -1.39
SYCP1-210ENST00000618516 NME9Q86XW9 330 aa6.4□□□□□ -1.39
SYCP1-210ENST00000618516 ABCC11Q96J66 1382 aa6.39□□□□□ -1.39
SYCP1-210ENST00000618516 DCAF8L1A6NGE4 600 aa6.39□□□□□ -1.39
SYCP1-210ENST00000618516 TMF1P82094 1093 aa6.39□□□□□ -1.39
SYCP1-210ENST00000618516 DDX10Q13206 875 aaKnown RBP6.39□□□□□ -1.39
SYCP1-210ENST00000618516 LRRC59Q96AG4 307 aaKnown RBP6.39□□□□□ -1.39
SYCP1-210ENST00000618516 PRDM11Q9NQV5 511 aa6.39□□□□□ -1.39
SYCP1-210ENST00000618516 ASXL1Q8IXJ9 1541 aa6.39□□□□□ -1.39
SYCP1-210ENST00000618516 ADGRL3Q9HAR2 1447 aa6.39□□□□□ -1.39
SYCP1-210ENST00000618516 NPHP3Q7Z494 1330 aa6.39□□□□□ -1.39
SYCP1-210ENST00000618516 CSB-PGBD3P0DP91 1061 aa6.39□□□□□ -1.39
SYCP1-210ENST00000618516 NRXN3Q9Y4C0 1643 aa6.38□□□□□ -1.39
SYCP1-210ENST00000618516 GPRASP1Q5JY77 1395 aa6.38□□□□□ -1.39
SYCP1-210ENST00000618516 ILDR2Q71H61 639 aa6.38□□□□□ -1.39
SYCP1-210ENST00000618516 C1orf167Q5SNV9 1468 aa6.38□□□□□ -1.39
SYCP1-210ENST00000618516 PPLO60437 1756 aa6.38□□□□□ -1.39
SYCP1-210ENST00000618516 RRS1Q15050 365 aaKnown RBP6.38□□□□□ -1.39
SYCP1-210ENST00000618516 KAT6BQ8WYB5 2073 aa6.37□□□□□ -1.39
SYCP1-210ENST00000618516 EVA1CP58658 441 aa6.37□□□□□ -1.39
SYCP1-210ENST00000618516 CPS1P31327 1500 aa6.37□□□□□ -1.39
SYCP1-210ENST00000618516 EIF3AQ14152 1382 aaKnown RBP6.37□□□□□ -1.39
SYCP1-210ENST00000618516 PIK3R4Q99570 1358 aa6.37□□□□□ -1.39
SYCP1-210ENST00000618516 MST1RQ04912 1400 aa6.37□□□□□ -1.39
SYCP1-210ENST00000618516 PPIP5K1Q6PFW1 1433 aa6.37□□□□□ -1.39
SYCP1-210ENST00000618516 HDGFL2Q7Z4V5 671 aaPredicted RBP6.36□□□□□ -1.39
SYCP1-210ENST00000618516 PANK3Q9H999 370 aa6.36□□□□□ -1.39
SYCP1-210ENST00000618516 BTG4Q9NY30 223 aa6.36□□□□□ -1.39
SYCP1-210ENST00000618516 SETBP1Q9Y6X0 1596 aa6.36□□□□□ -1.39
SYCP1-210ENST00000618516 TESK2Q96S53 571 aa6.36□□□□□ -1.39
SYCP1-210ENST00000618516 AFF2P51816 1311 aa6.36□□□□□ -1.39
SYCP1-210ENST00000618516 SLC24A1O60721 1099 aa6.35□□□□□ -1.39
SYCP1-210ENST00000618516 POTEAQ6S8J7 498 aa6.35□□□□□ -1.39
SYCP1-210ENST00000618516 RNF216Q9NWF9 866 aaPredicted RBP6.35□□□□□ -1.39
SYCP1-210ENST00000618516 USP21Q9UK80 565 aa6.35□□□□□ -1.39
SYCP1-210ENST00000618516 KTN1Q86UP2 1357 aaKnown RBP6.35□□□□□ -1.39
SYCP1-210ENST00000618516 NKTRP30414 1462 aaKnown RBP6.35□□□□□ -1.39
SYCP1-210ENST00000618516 MYOM2P54296 1465 aa6.35□□□□□ -1.39
SYCP1-210ENST00000618516 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.35□□□□□ -1.39
SYCP1-210ENST00000618516 USHBP1Q8N6Y0 703 aa6.35□□□□□ -1.39
SYCP1-210ENST00000618516 QTRT2Q9H974 415 aaKnown RBP6.35□□□□□ -1.39
SYCP1-210ENST00000618516 ROBO1Q9Y6N7 1651 aa6.35□□□□□ -1.39
SYCP1-210ENST00000618516 FAM98CQ17RN3 349 aaKnown RBP6.34□□□□□ -1.39
SYCP1-210ENST00000618516 CHD2O14647 1828 aaKnown RBP6.34□□□□□ -1.39
SYCP1-210ENST00000618516 ADGRB1O14514 1584 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms