RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 CD46P15529 392 aa10.46□□□□□ -0.73
U6.42-201ENST00000618440 WNT7AO00755 349 aa10.45□□□□□ -0.74
U6.42-201ENST00000618440 CTC1Q2NKJ3 1217 aa10.45□□□□□ -0.74
U6.42-201ENST00000618440 HLA-CQ95604 372 aa10.45□□□□□ -0.74
U6.42-201ENST00000618440 PLCB2Q00722 1185 aa10.44□□□□□ -0.74
U6.42-201ENST00000618440 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
U6.42-201ENST00000618440 TRIM32Q13049 653 aa10.43□□□□□ -0.74
U6.42-201ENST00000618440 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
U6.42-201ENST00000618440 J3QL48 77 aa10.42□□□□□ -0.74
U6.42-201ENST00000618440 DXOO77932 396 aaKnown RBP10.42□□□□□ -0.74
U6.42-201ENST00000618440 MRGPRX2Q96LB1 330 aa10.42□□□□□ -0.74
U6.42-201ENST00000618440 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
U6.42-201ENST00000618440 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
U6.42-201ENST00000618440 TTC24A2A3L6 582 aaPredicted RBP10.39□□□□□ -0.75
U6.42-201ENST00000618440 SKOR1P84550 965 aa10.39□□□□□ -0.75
U6.42-201ENST00000618440 ZBTB24O43167 697 aaPredicted RBP10.38□□□□□ -0.75
U6.42-201ENST00000618440 WFS1O76024 890 aa10.38□□□□□ -0.75
U6.42-201ENST00000618440 SNRPBP14678 240 aaKnown RBP10.38□□□□□ -0.75
U6.42-201ENST00000618440 ATP13A2Q9NQ11 1180 aa10.38□□□□□ -0.75
U6.42-201ENST00000618440 KDM2AQ9Y2K7 1162 aa10.38□□□□□ -0.75
U6.42-201ENST00000618440 KDM4AO75164 1064 aa10.37□□□□□ -0.75
U6.42-201ENST00000618440 MAP2K5Q13163 448 aa10.37□□□□□ -0.75
U6.42-201ENST00000618440 HPS1Q92902 700 aa10.37□□□□□ -0.75
U6.42-201ENST00000618440 USB1Q9BQ65 265 aaKnown RBP10.37□□□□□ -0.75
U6.42-201ENST00000618440 Q3C1V9 767 aa10.36□□□□□ -0.75
U6.42-201ENST00000618440 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
U6.42-201ENST00000618440 GUCA2AQ02747 115 aa10.35□□□□□ -0.75
U6.42-201ENST00000618440 IRF6O14896 467 aa10.34□□□□□ -0.75
U6.42-201ENST00000618440 HOXA2O43364 376 aa10.34□□□□□ -0.75
U6.42-201ENST00000618440 WIPF1O43516 503 aa10.34□□□□□ -0.75
U6.42-201ENST00000618440 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
U6.42-201ENST00000618440 SYMPKQ92797 1274 aaKnown RBP10.32□□□□□ -0.76
U6.42-201ENST00000618440 TRIM47Q96LD4 638 aa10.32□□□□□ -0.76
U6.42-201ENST00000618440 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
U6.42-201ENST00000618440 PTCRAQ6ISU1 281 aaPredicted RBP10.3□□□□□ -0.76
U6.42-201ENST00000618440 SIAH2O43255 324 aa10.28□□□□□ -0.76
U6.42-201ENST00000618440 WNT7BP56706 349 aa10.28□□□□□ -0.76
U6.42-201ENST00000618440 USP46P62068 366 aa10.28□□□□□ -0.76
U6.42-201ENST00000618440 CCDC102AQ96A19 550 aa10.28□□□□□ -0.76
U6.42-201ENST00000618440 TERTO14746 1132 aaKnown RBP10.27□□□□□ -0.77
U6.42-201ENST00000618440 JUNDP17535 347 aa10.27□□□□□ -0.77
U6.42-201ENST00000618440 CCDC24Q8N4L8 307 aa10.27□□□□□ -0.77
U6.42-201ENST00000618440 REPIN1Q9BWE0 567 aaKnown RBP10.27□□□□□ -0.77
U6.42-201ENST00000618440 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
U6.42-201ENST00000618440 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
U6.42-201ENST00000618440 PCDHGC3Q9UN70 934 aa10.25□□□□□ -0.77
U6.42-201ENST00000618440 TRIM46Q7Z4K8 759 aa10.22□□□□□ -0.77
U6.42-201ENST00000618440 SENP2Q9HC62 589 aa10.22□□□□□ -0.77
U6.42-201ENST00000618440 GPCPD1Q9NPB8 672 aa10.22□□□□□ -0.77
U6.42-201ENST00000618440 STK17AQ9UEE5 414 aa10.22□□□□□ -0.77
U6.42-201ENST00000618440 LORP23490 312 aaPredicted RBP10.21□□□□□ -0.77
U6.42-201ENST00000618440 ALDH1A1P00352 501 aa10.2□□□□□ -0.78
U6.42-201ENST00000618440 RETREG3Q86VR2 466 aa10.2□□□□□ -0.78
U6.42-201ENST00000618440 NUDT12Q9BQG2 462 aa10.2□□□□□ -0.78
U6.42-201ENST00000618440 HAP1P54257 671 aaPredicted RBP10.19□□□□□ -0.78
U6.42-201ENST00000618440 BMP1P13497 986 aa10.18□□□□□ -0.78
U6.42-201ENST00000618440 SH3BP2P78314 561 aa10.18□□□□□ -0.78
U6.42-201ENST00000618440 KIFC2Q96AC6 838 aa10.18□□□□□ -0.78
U6.42-201ENST00000618440 CLCN1P35523 988 aa10.17□□□□□ -0.78
U6.42-201ENST00000618440 INSM1Q01101 510 aaPredicted RBP10.17□□□□□ -0.78
U6.42-201ENST00000618440 FDX1P10109 184 aa10.14□□□□□ -0.79
U6.42-201ENST00000618440 EHBP1Q8NDI1 1231 aa10.14□□□□□ -0.79
U6.42-201ENST00000618440 NDUFV2P19404 249 aa10.13□□□□□ -0.79
U6.42-201ENST00000618440 SPIRE2Q8WWL2 714 aa10.13□□□□□ -0.79
U6.42-201ENST00000618440 CCNYL3P0C7X3 344 aa10.12□□□□□ -0.79
U6.42-201ENST00000618440 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
U6.42-201ENST00000618440 NXF1Q9UBU9 619 aaKnown RBP10.12□□□□□ -0.79
U6.42-201ENST00000618440 GMPRP36959 345 aa10.11□□□□□ -0.79
U6.42-201ENST00000618440 UNC93B1Q9H1C4 597 aa10.11□□□□□ -0.79
U6.42-201ENST00000618440 EVA1BQ9NVM1 165 aa10.11□□□□□ -0.79
U6.42-201ENST00000618440 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
U6.42-201ENST00000618440 MOXD2PA6NHM9 499 aa10.1□□□□□ -0.79
U6.42-201ENST00000618440 C6orf229H3BNL8 230 aa10.1□□□□□ -0.79
U6.42-201ENST00000618440 CAPN5O15484 640 aaPredicted RBP10.1□□□□□ -0.79
U6.42-201ENST00000618440 MS4A1P11836 297 aa10.1□□□□□ -0.79
U6.42-201ENST00000618440 PTPRNQ16849 979 aa10.1□□□□□ -0.79
U6.42-201ENST00000618440 SSTR3P32745 418 aaPredicted RBP10.09□□□□□ -0.79
U6.42-201ENST00000618440 VEGFBP49765 207 aa10.09□□□□□ -0.79
U6.42-201ENST00000618440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
U6.42-201ENST00000618440 BAP1Q92560 729 aa10.09□□□□□ -0.79
U6.42-201ENST00000618440 ERBB4Q15303 1308 aa10.08□□□□□ -0.8
U6.42-201ENST00000618440 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
U6.42-201ENST00000618440 KCNH2Q12809 1159 aa10.07□□□□□ -0.8
U6.42-201ENST00000618440 WASF2Q9Y6W5 498 aa10.07□□□□□ -0.8
U6.42-201ENST00000618440 H3BM21 787 aa10.06□□□□□ -0.8
U6.42-201ENST00000618440 ZFP42Q96MM3 310 aa10.06□□□□□ -0.8
U6.42-201ENST00000618440 KLF16Q9BXK1 252 aaPredicted RBP10.06□□□□□ -0.8
U6.42-201ENST00000618440 NPAS3Q8IXF0 933 aa10.05□□□□□ -0.8
U6.42-201ENST00000618440 MPNDQ8N594 471 aa10.05□□□□□ -0.8
U6.42-201ENST00000618440 ZNF511Q8NB15 262 aa10.05□□□□□ -0.8
U6.42-201ENST00000618440 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
U6.42-201ENST00000618440 TIMP2P16035 220 aa10.03□□□□□ -0.8
U6.42-201ENST00000618440 AMHR2Q16671 573 aa10.03□□□□□ -0.8
U6.42-201ENST00000618440 DESI1Q6ICB0 168 aa10.03□□□□□ -0.8
U6.42-201ENST00000618440 NNTQ13423 1086 aa10.02□□□□□ -0.81
U6.42-201ENST00000618440 SLC16A10Q8TF71 515 aa10.02□□□□□ -0.81
U6.42-201ENST00000618440 TULP1O00294 542 aaPredicted RBP10.01□□□□□ -0.81
U6.42-201ENST00000618440 MTMR2Q13614 643 aa10.01□□□□□ -0.81
U6.42-201ENST00000618440 BARGINQ6ZT62 677 aa10.01□□□□□ -0.81
U6.42-201ENST00000618440 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms