RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	LRP6	O75581	1613 aa		32.82	■■■□□ 2.84
ARHGEF1-223	ENST00000617585	CFAP70	Q5T0N1	1121 aa		32.82	■■■□□ 2.84
ARHGEF1-223	ENST00000617585	WAPL	Q7Z5K2	1190 aa		32.81	■■■□□ 2.84
ARHGEF1-223	ENST00000617585	LRRC59	Q96AG4	307 aa	Known RBP	32.8	■■■□□ 2.84
ARHGEF1-223	ENST00000617585	DHX57	Q6P158	1386 aa	Known RBP	32.8	■■■□□ 2.84
ARHGEF1-223	ENST00000617585	PLEKHH1	Q9ULM0	1364 aa		32.78	■■■□□ 2.84
ARHGEF1-223	ENST00000617585	ORAI2	Q96SN7	254 aa		32.77	■■■□□ 2.84
ARHGEF1-223	ENST00000617585	ADGRB1	O14514	1584 aa		32.76	■■■□□ 2.84
ARHGEF1-223	ENST00000617585	DDX17	Q92841	729 aa	Known RBP	32.75	■■■□□ 2.83
ARHGEF1-223	ENST00000617585	DLC1	Q96QB1	1528 aa		32.75	■■■□□ 2.83
ARHGEF1-223	ENST00000617585	SOS2	Q07890	1332 aa	Predicted RBP	32.75	■■■□□ 2.83
ARHGEF1-223	ENST00000617585	FMN2	Q9NZ56	1722 aa		32.74	■■■□□ 2.83
ARHGEF1-223	ENST00000617585	POTEA	Q6S8J7	498 aa		32.73	■■■□□ 2.83
ARHGEF1-223	ENST00000617585	DCAF11	Q8TEB1	546 aa		32.71	■■■□□ 2.83
ARHGEF1-223	ENST00000617585	PNPLA6	Q8IY17	1366 aa		32.7	■■■□□ 2.83
ARHGEF1-223	ENST00000617585	KDM2A	Q9Y2K7	1162 aa		32.66	■■■□□ 2.82
ARHGEF1-223	ENST00000617585	ESCO1	Q5FWF5	840 aa		32.64	■■■□□ 2.82
ARHGEF1-223	ENST00000617585	NPHP3	Q7Z494	1330 aa		32.64	■■■□□ 2.82
ARHGEF1-223	ENST00000617585	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.62	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	PXDN	Q92626	1479 aa		32.62	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	MEX3C	Q5U5Q3	659 aa	Known RBP	32.62	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	PRAM1	Q96QH2	718 aa		32.62	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	KIF1A	Q12756	1690 aa		32.62	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	ADGRB2	O60241	1585 aa		32.62	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	RGPD8	O14715	1765 aa	Predicted RBP	32.61	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	ZNF772	Q68DY9	489 aa	Predicted RBP	32.59	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	KIAA1210	Q9ULL0	1709 aa		32.59	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.58	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	NUTM2E	B1AL46	878 aa	Predicted RBP	32.58	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.58	■■■□□ 2.81
ARHGEF1-223	ENST00000617585	NUTM2F	A1L443	756 aa		32.55	■■■□□ 2.8
ARHGEF1-223	ENST00000617585	FOXO3	O43524	673 aa		32.55	■■■□□ 2.8
ARHGEF1-223	ENST00000617585	POGK	Q9P215	609 aa		32.54	■■■□□ 2.8
ARHGEF1-223	ENST00000617585	TRAK1	Q9UPV9	953 aa		32.54	■■■□□ 2.8
ARHGEF1-223	ENST00000617585	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.53	■■■□□ 2.8
ARHGEF1-223	ENST00000617585	USP32	Q8NFA0	1604 aa		32.51	■■■□□ 2.8
ARHGEF1-223	ENST00000617585	ANKAR	Q7Z5J8	1434 aa		32.51	■■■□□ 2.79
ARHGEF1-223	ENST00000617585	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.5	■■■□□ 2.79
ARHGEF1-223	ENST00000617585	AFF2	P51816	1311 aa		32.49	■■■□□ 2.79
ARHGEF1-223	ENST00000617585	PHF8	Q9UPP1	1060 aa		32.46	■■■□□ 2.79
ARHGEF1-223	ENST00000617585	MARF1	Q9Y4F3	1742 aa	Known RBP	32.44	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	XPC	Q01831	940 aa	Predicted RBP	32.43	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	C8orf37	Q96NL8	207 aa		32.43	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	SPATA31A3	Q5VYP0	1347 aa		32.43	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	EIF3A	Q14152	1382 aa	Known RBP	32.42	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	TULP4	Q9NRJ4	1543 aa		32.41	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	KRT28	Q7Z3Y7	464 aa		32.41	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.41	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	WASL	O00401	505 aa	Predicted RBP	32.39	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	ADAMTS2	O95450	1211 aa		32.39	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.39	■■■□□ 2.78
ARHGEF1-223	ENST00000617585	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.38	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	SBNO1	A3KN83	1393 aa		32.37	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	RXRB	P28702	533 aa		32.37	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	PSME1	Q06323	249 aa		32.36	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.36	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	NGLY1	Q96IV0	654 aa		32.36	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	PRR36	Q9H6K5	1346 aa		32.35	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	TNS3	Q68CZ2	1445 aa		32.34	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	NBPF1	Q3BBV0	1214 aa		32.34	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	L3MBTL2	Q969R5	705 aa		32.34	■■■□□ 2.77
ARHGEF1-223	ENST00000617585	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.32	■■■□□ 2.76
ARHGEF1-223	ENST00000617585	SIN3A	Q96ST3	1273 aa		32.32	■■■□□ 2.76
ARHGEF1-223	ENST00000617585	QTRT2	Q9H974	415 aa	Known RBP	32.32	■■■□□ 2.76
ARHGEF1-223	ENST00000617585	ITSN1	Q15811	1721 aa		32.31	■■■□□ 2.76
ARHGEF1-223	ENST00000617585	RBM6	P78332	1123 aa	Known RBP	32.29	■■■□□ 2.76
ARHGEF1-223	ENST00000617585	PMFBP1	Q8TBY8	1022 aa		32.29	■■■□□ 2.76
ARHGEF1-223	ENST00000617585	ATP7B	P35670	1465 aa		32.29	■■■□□ 2.76
ARHGEF1-223	ENST00000617585	USP21	Q9UK80	565 aa		32.27	■■■□□ 2.76
ARHGEF1-223	ENST00000617585	TRPM1	Q7Z4N2	1603 aa		32.26	■■■□□ 2.76
ARHGEF1-223	ENST00000617585	ARHGEF10	O15013	1369 aa		32.26	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	ALS2	Q96Q42	1657 aa		32.26	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	ABCA3	Q99758	1704 aa		32.26	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	BCL9L	Q86UU0	1499 aa		32.25	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.25	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	ATRN	O75882	1429 aa		32.24	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	TRPC5	Q9UL62	973 aa	Predicted RBP	32.23	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	TOPAZ1	Q8N9V7	1692 aa		32.23	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	NUDT16	Q96DE0	195 aa	Known RBP	32.22	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	GPRASP1	Q5JY77	1395 aa		32.21	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	TRIM26	Q12899	539 aa	Predicted RBP	32.21	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	CDK19	Q9BWU1	502 aa		32.21	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	SLIT2	O94813	1529 aa		32.21	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	RGS12	O14924	1447 aa		32.2	■■■□□ 2.75
ARHGEF1-223	ENST00000617585	NEUROD1	Q13562	356 aa		32.19	■■■□□ 2.74
ARHGEF1-223	ENST00000617585	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.17	■■■□□ 2.74
ARHGEF1-223	ENST00000617585	QRICH2	Q9H0J4	1663 aa		32.17	■■■□□ 2.74
ARHGEF1-223	ENST00000617585	NGDN	Q8NEJ9	315 aa	Known RBP	32.15	■■■□□ 2.74
ARHGEF1-223	ENST00000617585	NWD2	Q9ULI1	1742 aa		32.14	■■■□□ 2.74
ARHGEF1-223	ENST00000617585	CCDC61	Q9Y6R9	512 aa		32.14	■■■□□ 2.74
ARHGEF1-223	ENST00000617585	POLR3A	O14802	1390 aa	Predicted RBP	32.14	■■■□□ 2.74
ARHGEF1-223	ENST00000617585	CRYBG1	Q9Y4K1	1723 aa		32.14	■■■□□ 2.74
ARHGEF1-223	ENST00000617585	PLEKHG3	A1L390	1219 aa		32.13	■■■□□ 2.73
ARHGEF1-223	ENST00000617585	CABLES1	Q8TDN4	633 aa		32.13	■■■□□ 2.73
ARHGEF1-223	ENST00000617585	LMOD2	Q6P5Q4	547 aa		32.11	■■■□□ 2.73
ARHGEF1-223	ENST00000617585	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.11	■■■□□ 2.73
ARHGEF1-223	ENST00000617585	UNC5CL	Q8IV45	518 aa		32.1	■■■□□ 2.73
ARHGEF1-223	ENST00000617585	PLCH1	Q4KWH8	1693 aa		32.1	■■■□□ 2.73
ARHGEF1-223	ENST00000617585	HAP1	P54257	671 aa	Predicted RBP	32.07	■■■□□ 2.72
ARHGEF1-223	ENST00000617585	GJD4	Q96KN9	370 aa	Predicted RBP	32.07	■■■□□ 2.72

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