RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 CTC1Q2NKJ3 1217 aa9.31□□□□□ -0.92
MALAT1-210ENST00000617489 MSS51Q4VC12 460 aa9.31□□□□□ -0.92
MALAT1-210ENST00000617489 GMPR2Q9P2T1 348 aaKnown RBP9.31□□□□□ -0.92
MALAT1-210ENST00000617489 PLCB2Q00722 1185 aa9.3□□□□□ -0.92
MALAT1-210ENST00000617489 CCDC24Q8N4L8 307 aa9.27□□□□□ -0.93
MALAT1-210ENST00000617489 SNIP1Q8TAD8 396 aaKnown RBP9.27□□□□□ -0.93
MALAT1-210ENST00000617489 WNT7AO00755 349 aa9.26□□□□□ -0.93
MALAT1-210ENST00000617489 TRIM32Q13049 653 aa9.26□□□□□ -0.93
MALAT1-210ENST00000617489 USB1Q9BQ65 265 aaKnown RBP9.26□□□□□ -0.93
MALAT1-210ENST00000617489 KDM4AO75164 1064 aa9.25□□□□□ -0.93
MALAT1-210ENST00000617489 WFS1O76024 890 aa9.25□□□□□ -0.93
MALAT1-210ENST00000617489 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
MALAT1-210ENST00000617489 CD46P15529 392 aa9.24□□□□□ -0.93
MALAT1-210ENST00000617489 MMP16P51512 607 aa9.24□□□□□ -0.93
MALAT1-210ENST00000617489 HAP1P54257 671 aaPredicted RBP9.24□□□□□ -0.93
MALAT1-210ENST00000617489 MRGPRX2Q96LB1 330 aa9.24□□□□□ -0.93
MALAT1-210ENST00000617489 TULP1O00294 542 aaPredicted RBP9.23□□□□□ -0.93
MALAT1-210ENST00000617489 SMPD1P17405 629 aa9.23□□□□□ -0.93
MALAT1-210ENST00000617489 J3QL48 77 aa9.22□□□□□ -0.93
MALAT1-210ENST00000617489 MDM2Q00987 491 aaPredicted RBP9.22□□□□□ -0.93
MALAT1-210ENST00000617489 MAP2K5Q13163 448 aa9.21□□□□□ -0.94
MALAT1-210ENST00000617489 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.94
MALAT1-210ENST00000617489 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.94
MALAT1-210ENST00000617489 DXOO77932 396 aaKnown RBP9.2□□□□□ -0.94
MALAT1-210ENST00000617489 USP46P62068 366 aa9.2□□□□□ -0.94
MALAT1-210ENST00000617489 ATP13A2Q9NQ11 1180 aa9.2□□□□□ -0.94
MALAT1-210ENST00000617489 IRF6O14896 467 aa9.19□□□□□ -0.94
MALAT1-210ENST00000617489 HLA-CQ95604 372 aa9.19□□□□□ -0.94
MALAT1-210ENST00000617489 SENP2Q9HC62 589 aa9.19□□□□□ -0.94
MALAT1-210ENST00000617489 RC3H1Q5TC82 1133 aaKnown RBP9.18□□□□□ -0.94
MALAT1-210ENST00000617489 SNRPBP14678 240 aaKnown RBP9.17□□□□□ -0.94
MALAT1-210ENST00000617489 KRI1Q8N9T8 703 aaKnown RBP9.17□□□□□ -0.94
MALAT1-210ENST00000617489 HPS1Q92902 700 aa9.17□□□□□ -0.94
MALAT1-210ENST00000617489 MINK1Q8N4C8 1332 aaPredicted RBP9.16□□□□□ -0.94
MALAT1-210ENST00000617489 HOXA2O43364 376 aa9.15□□□□□ -0.94
MALAT1-210ENST00000617489 ALDH1A1P00352 501 aa9.15□□□□□ -0.94
MALAT1-210ENST00000617489 WNT7BP56706 349 aa9.15□□□□□ -0.94
MALAT1-210ENST00000617489 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.94
MALAT1-210ENST00000617489 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.94
MALAT1-210ENST00000617489 GUCA2AQ02747 115 aa9.14□□□□□ -0.95
MALAT1-210ENST00000617489 SYMPKQ92797 1274 aaKnown RBP9.14□□□□□ -0.95
MALAT1-210ENST00000617489 JUNDP17535 347 aa9.13□□□□□ -0.95
MALAT1-210ENST00000617489 SKOR1P84550 965 aa9.13□□□□□ -0.95
MALAT1-210ENST00000617489 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
MALAT1-210ENST00000617489 KIFC2Q96AC6 838 aa9.13□□□□□ -0.95
MALAT1-210ENST00000617489 TRIM47Q96LD4 638 aa9.13□□□□□ -0.95
MALAT1-210ENST00000617489 TERTO14746 1132 aaKnown RBP9.12□□□□□ -0.95
MALAT1-210ENST00000617489 CLCN1P35523 988 aa9.12□□□□□ -0.95
MALAT1-210ENST00000617489 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
MALAT1-210ENST00000617489 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
MALAT1-210ENST00000617489 CCDC102AQ96A19 550 aa9.11□□□□□ -0.95
MALAT1-210ENST00000617489 EHBP1Q8NDI1 1231 aa9.1□□□□□ -0.95
MALAT1-210ENST00000617489 NUDT12Q9BQG2 462 aa9.1□□□□□ -0.95
MALAT1-210ENST00000617489 STK17AQ9UEE5 414 aa9.1□□□□□ -0.95
MALAT1-210ENST00000617489 C6orf229H3BNL8 230 aa9.09□□□□□ -0.95
MALAT1-210ENST00000617489 WIPF1O43516 503 aa9.09□□□□□ -0.95
MALAT1-210ENST00000617489 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
MALAT1-210ENST00000617489 FAM217BQ9NTX9 383 aaPredicted RBP9.09□□□□□ -0.95
MALAT1-210ENST00000617489 WASF2Q9Y6W5 498 aa9.09□□□□□ -0.95
MALAT1-210ENST00000617489 FDX1P10109 184 aa9.07□□□□□ -0.96
MALAT1-210ENST00000617489 PTCRAQ6ISU1 281 aaPredicted RBP9.07□□□□□ -0.96
MALAT1-210ENST00000617489 SLC16A10Q8TF71 515 aa9.07□□□□□ -0.96
MALAT1-210ENST00000617489 CAPN5O15484 640 aaPredicted RBP9.05□□□□□ -0.96
MALAT1-210ENST00000617489 MS4A1P11836 297 aa9.05□□□□□ -0.96
MALAT1-210ENST00000617489 SIAH2O43255 324 aa9.03□□□□□ -0.96
MALAT1-210ENST00000617489 CCNYL3P0C7X3 344 aa9.03□□□□□ -0.96
MALAT1-210ENST00000617489 BMP1P13497 986 aa9.02□□□□□ -0.97
MALAT1-210ENST00000617489 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
MALAT1-210ENST00000617489 SH3BP2P78314 561 aa9.02□□□□□ -0.97
MALAT1-210ENST00000617489 PCDHGC3Q9UN70 934 aa9.02□□□□□ -0.97
MALAT1-210ENST00000617489 LINC01559Q495D7 138 aa9.01□□□□□ -0.97
MALAT1-210ENST00000617489 NXF1Q9UBU9 619 aaKnown RBP9.01□□□□□ -0.97
MALAT1-210ENST00000617489 LCE2CQ5TA81 110 aa9□□□□□ -0.97
MALAT1-210ENST00000617489 BAP1Q92560 729 aa9□□□□□ -0.97
MALAT1-210ENST00000617489 NDUFV2P19404 249 aa8.99□□□□□ -0.97
MALAT1-210ENST00000617489 TRIM46Q7Z4K8 759 aa8.99□□□□□ -0.97
MALAT1-210ENST00000617489 VSIG10Q8N0Z9 540 aa8.99□□□□□ -0.97
MALAT1-210ENST00000617489 SPIRE2Q8WWL2 714 aa8.99□□□□□ -0.97
MALAT1-210ENST00000617489 UNC93B1Q9H1C4 597 aa8.99□□□□□ -0.97
MALAT1-210ENST00000617489 EVA1BQ9NVM1 165 aa8.99□□□□□ -0.97
MALAT1-210ENST00000617489 FAM181BA6NEQ2 426 aa8.98□□□□□ -0.97
MALAT1-210ENST00000617489 TTLL12Q14166 644 aaPredicted RBP8.98□□□□□ -0.97
MALAT1-210ENST00000617489 PTPRNQ16849 979 aa8.98□□□□□ -0.97
MALAT1-210ENST00000617489 PLEKHG3A1L390 1219 aa8.97□□□□□ -0.97
MALAT1-210ENST00000617489 KCNH2Q12809 1159 aa8.97□□□□□ -0.97
MALAT1-210ENST00000617489 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
MALAT1-210ENST00000617489 IRF7Q92985 503 aa8.97□□□□□ -0.97
MALAT1-210ENST00000617489 MOXD2PA6NHM9 499 aa8.96□□□□□ -0.98
MALAT1-210ENST00000617489 VEGFBP49765 207 aa8.96□□□□□ -0.98
MALAT1-210ENST00000617489 VARSP26640 1264 aaKnown RBP8.95□□□□□ -0.98
MALAT1-210ENST00000617489 GMPRP36959 345 aa8.95□□□□□ -0.98
MALAT1-210ENST00000617489 MTMR2Q13614 643 aa8.95□□□□□ -0.98
MALAT1-210ENST00000617489 TLL2Q9Y6L7 1015 aa8.95□□□□□ -0.98
MALAT1-210ENST00000617489 SPDYE5A6NIY4 337 aa8.94□□□□□ -0.98
MALAT1-210ENST00000617489 CTHP32929 405 aa8.94□□□□□ -0.98
MALAT1-210ENST00000617489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.94□□□□□ -0.98
MALAT1-210ENST00000617489 ZNF511Q8NB15 262 aa8.94□□□□□ -0.98
MALAT1-210ENST00000617489 ZFP42Q96MM3 310 aa8.94□□□□□ -0.98
MALAT1-210ENST00000617489 NNTQ13423 1086 aa8.93□□□□□ -0.98
MALAT1-210ENST00000617489 SCARF1Q14162 830 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms