RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
C11orf54-215ENST00000617482 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
C11orf54-215ENST00000617482 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
C11orf54-215ENST00000617482 COG6Q9Y2V7 657 aa15.28■□□□□ 0.04
C11orf54-215ENST00000617482 NRXN1Q9ULB1 1477 aa15.28■□□□□ 0.04
C11orf54-215ENST00000617482 SBNO2Q9Y2G9 1366 aa15.27■□□□□ 0.03
C11orf54-215ENST00000617482 USP35Q9P2H5 1018 aa15.27■□□□□ 0.03
C11orf54-215ENST00000617482 MTHFSP49914 203 aa15.26■□□□□ 0.03
C11orf54-215ENST00000617482 TCP11L2Q8N4U5 519 aa15.26■□□□□ 0.03
C11orf54-215ENST00000617482 NPATQ14207 1427 aa15.26■□□□□ 0.03
C11orf54-215ENST00000617482 RUNDC1Q96C34 613 aa15.25■□□□□ 0.03
C11orf54-215ENST00000617482 ZNF518AQ6AHZ1 1483 aa15.25■□□□□ 0.03
C11orf54-215ENST00000617482 PDE3AQ14432 1141 aa15.25■□□□□ 0.03
C11orf54-215ENST00000617482 CGNL1Q0VF96 1302 aa15.23■□□□□ 0.03
C11orf54-215ENST00000617482 CD109Q6YHK3 1445 aa15.23■□□□□ 0.03
C11orf54-215ENST00000617482 CLUAP1Q96AJ1 413 aa15.23■□□□□ 0.03
C11orf54-215ENST00000617482 ADGRB3O60242 1522 aa15.23■□□□□ 0.03
C11orf54-215ENST00000617482 RAPGEF3O95398 923 aa15.23■□□□□ 0.03
C11orf54-215ENST00000617482 SAFB2Q14151 953 aaKnown RBP eCLIP15.23■□□□□ 0.03
C11orf54-215ENST00000617482 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
C11orf54-215ENST00000617482 IFT172Q9UG01 1749 aa15.23■□□□□ 0.03
C11orf54-215ENST00000617482 LMTK2Q8IWU2 1503 aa15.22■□□□□ 0.03
C11orf54-215ENST00000617482 BCL2L13Q9BXK5 485 aa15.22■□□□□ 0.03
C11orf54-215ENST00000617482 RARSP54136 660 aaKnown RBP15.22■□□□□ 0.03
C11orf54-215ENST00000617482 CABP2Q9NPB3 220 aa15.21■□□□□ 0.02
C11orf54-215ENST00000617482 TNNQ9UQP3 1299 aa15.21■□□□□ 0.02
C11orf54-215ENST00000617482 MYO3AQ8NEV4 1616 aa15.2■□□□□ 0.02
C11orf54-215ENST00000617482 NFKBIBQ15653 356 aa15.2■□□□□ 0.02
C11orf54-215ENST00000617482 CFAP53Q96M91 514 aa15.2■□□□□ 0.02
C11orf54-215ENST00000617482 SETBP1Q9Y6X0 1596 aa15.2■□□□□ 0.02
C11orf54-215ENST00000617482 FRMPD1Q5SYB0 1578 aa15.19■□□□□ 0.02
C11orf54-215ENST00000617482 RPGRIP1LQ68CZ1 1315 aa15.19■□□□□ 0.02
C11orf54-215ENST00000617482 U2AF1L5P0DN76 240 aaPredicted RBP15.19■□□□□ 0.02
C11orf54-215ENST00000617482 RLBP1P12271 317 aa15.19■□□□□ 0.02
C11orf54-215ENST00000617482 U2AF1Q01081 240 aaKnown RBP eCLIP15.19■□□□□ 0.02
C11orf54-215ENST00000617482 EVC2Q86UK5 1308 aa15.19■□□□□ 0.02
C11orf54-215ENST00000617482 ADGRB1O14514 1584 aa15.19■□□□□ 0.02
C11orf54-215ENST00000617482 POGZQ7Z3K3 1410 aa15.19■□□□□ 0.02
C11orf54-215ENST00000617482 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
C11orf54-215ENST00000617482 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
C11orf54-215ENST00000617482 STK26Q9P289 416 aa15.18■□□□□ 0.02
C11orf54-215ENST00000617482 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
C11orf54-215ENST00000617482 QRICH2Q9H0J4 1663 aa15.16■□□□□ 0.02
C11orf54-215ENST00000617482 SEC24BO95487 1268 aa15.16■□□□□ 0.02
C11orf54-215ENST00000617482 PCDHB15Q9Y5E8 787 aa15.16■□□□□ 0.02
C11orf54-215ENST00000617482 NINLQ9Y2I6 1382 aa15.16■□□□□ 0.02
C11orf54-215ENST00000617482 SHPRHQ149N8 1683 aa15.16■□□□□ 0.02
C11orf54-215ENST00000617482 MLH3Q9UHC1 1453 aa15.14■□□□□ 0.01
C11orf54-215ENST00000617482 PPLO60437 1756 aa15.14■□□□□ 0.01
C11orf54-215ENST00000617482 HECW2Q9P2P5 1572 aa15.14■□□□□ 0.01
C11orf54-215ENST00000617482 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
C11orf54-215ENST00000617482 MAPK8IP3Q9UPT6 1336 aa15.14■□□□□ 0.01
C11orf54-215ENST00000617482 IDI1Q13907 227 aa15.14■□□□□ 0.01
C11orf54-215ENST00000617482 CCDC27Q2M243 656 aa15.14■□□□□ 0.01
C11orf54-215ENST00000617482 ANKRD36BQ8N2N9 1353 aa15.13■□□□□ 0.01
C11orf54-215ENST00000617482 USP19O94966 1318 aa15.13■□□□□ 0.01
C11orf54-215ENST00000617482 SRPK2P78362 688 aaKnown RBP15.13■□□□□ 0.01
C11orf54-215ENST00000617482 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
C11orf54-215ENST00000617482 PMFBP1Q8TBY8 1022 aa15.13■□□□□ 0.01
C11orf54-215ENST00000617482 GGNBP2Q9H3C7 697 aa15.13■□□□□ 0.01
C11orf54-215ENST00000617482 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
C11orf54-215ENST00000617482 ABCC3O15438 1527 aa15.13■□□□□ 0.01
C11orf54-215ENST00000617482 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
C11orf54-215ENST00000617482 IL27Q8NEV9 243 aa15.12■□□□□ 0.01
C11orf54-215ENST00000617482 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
C11orf54-215ENST00000617482 SIGLEC1Q9BZZ2 1709 aa15.12■□□□□ 0.01
C11orf54-215ENST00000617482 GSE1Q14687 1217 aa15.11■□□□□ 0.01
C11orf54-215ENST00000617482 PUS7Q96PZ0 661 aaKnown RBP15.11■□□□□ 0.01
C11orf54-215ENST00000617482 ZC3H13Q5T200 1668 aaKnown RBP15.11■□□□□ 0.01
C11orf54-215ENST00000617482 FRAT2O75474 233 aaPredicted RBP15.11■□□□□ 0.01
C11orf54-215ENST00000617482 TULP4Q9NRJ4 1543 aa15.1■□□□□ 0.01
C11orf54-215ENST00000617482 PDZRN3Q9UPQ7 1066 aa15.1■□□□□ 0.01
C11orf54-215ENST00000617482 GLI2P10070 1586 aa15.1■□□□□ 0.01
C11orf54-215ENST00000617482 CFAP74Q9C0B2 1584 aa15.09■□□□□ 0.01
C11orf54-215ENST00000617482 MINK1Q8N4C8 1332 aaPredicted RBP15.09■□□□□ 0.01
C11orf54-215ENST00000617482 A0A1W2PP64 1363 aa15.08■□□□□ 0.01
C11orf54-215ENST00000617482 NSD2O96028 1365 aa15.08■□□□□ 0.01
C11orf54-215ENST00000617482 AAMPQ13685 434 aa15.08■□□□□ 0
C11orf54-215ENST00000617482 FTSJ3Q8IY81 847 aaKnown RBP15.08■□□□□ 0
C11orf54-215ENST00000617482 RWDD1Q9H446 243 aaPredicted RBP15.08■□□□□ 0
C11orf54-215ENST00000617482 CAMSAP1Q5T5Y3 1602 aa15.08■□□□□ 0
C11orf54-215ENST00000617482 EXOSC9Q06265 439 aaKnown RBP15.07■□□□□ 0
C11orf54-215ENST00000617482 MVPQ14764 893 aaKnown RBP15.07■□□□□ 0
C11orf54-215ENST00000617482 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
C11orf54-215ENST00000617482 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
C11orf54-215ENST00000617482 TMPOP42166 694 aaKnown RBP15.06■□□□□ 0
C11orf54-215ENST00000617482 DZIP1LQ8IYY4 767 aaKnown RBP15.06■□□□□ 0
C11orf54-215ENST00000617482 PRAM1Q96QH2 718 aa15.06■□□□□ 0
C11orf54-215ENST00000617482 SMC4Q9NTJ3 1288 aa15.06■□□□□ 0
C11orf54-215ENST00000617482 NEXMIFQ5QGS0 1516 aa15.06■□□□□ 0
C11orf54-215ENST00000617482 YEATS2Q9ULM3 1422 aa15.06■□□□□ 0
C11orf54-215ENST00000617482 FYB1O15117 783 aa15.06■□□□□ 0
C11orf54-215ENST00000617482 POGKQ9P215 609 aa15.06■□□□□ 0
C11orf54-215ENST00000617482 USP32Q8NFA0 1604 aa15.06■□□□□ 0
C11orf54-215ENST00000617482 TRIM35Q9UPQ4 493 aa15.05■□□□□ 0
C11orf54-215ENST00000617482 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
C11orf54-215ENST00000617482 DIP2CQ9Y2E4 1556 aa15.05■□□□□ -0
C11orf54-215ENST00000617482 ABCC11Q96J66 1382 aa15.04■□□□□ -0
C11orf54-215ENST00000617482 SSH1Q8WYL5 1049 aa15.04■□□□□ -0
C11orf54-215ENST00000617482 TERF2IPQ9NYB0 399 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms