RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 DHX57Q6P158 1386 aaKnown RBP14.19□□□□□ -0.14
TARDBP-218ENST00000617172 SOS2Q07890 1332 aaPredicted RBP14.18□□□□□ -0.14
TARDBP-218ENST00000617172 DDX17Q92841 729 aaKnown RBP14.18□□□□□ -0.14
TARDBP-218ENST00000617172 YTHDC2Q9H6S0 1430 aaKnown RBP14.17□□□□□ -0.14
TARDBP-218ENST00000617172 CFAP70Q5T0N1 1121 aa14.17□□□□□ -0.14
TARDBP-218ENST00000617172 NALCNQ8IZF0 1738 aa14.17□□□□□ -0.14
TARDBP-218ENST00000617172 SHPRHQ149N8 1683 aa14.17□□□□□ -0.14
TARDBP-218ENST00000617172 NPHP3Q7Z494 1330 aa14.16□□□□□ -0.14
TARDBP-218ENST00000617172 LRP6O75581 1613 aa14.16□□□□□ -0.14
TARDBP-218ENST00000617172 MYOM2P54296 1465 aa14.16□□□□□ -0.14
TARDBP-218ENST00000617172 NRXN1Q9ULB1 1477 aa14.16□□□□□ -0.14
TARDBP-218ENST00000617172 PNPLA6Q8IY17 1366 aa14.15□□□□□ -0.14
TARDBP-218ENST00000617172 NHSL1Q5SYE7 1610 aa14.15□□□□□ -0.14
TARDBP-218ENST00000617172 DCAF11Q8TEB1 546 aa14.14□□□□□ -0.15
TARDBP-218ENST00000617172 IFT172Q9UG01 1749 aa14.13□□□□□ -0.15
TARDBP-218ENST00000617172 FOXO3O43524 673 aa14.13□□□□□ -0.15
TARDBP-218ENST00000617172 RXRBP28702 533 aa14.13□□□□□ -0.15
TARDBP-218ENST00000617172 CDC42BPGQ6DT37 1551 aa14.13□□□□□ -0.15
TARDBP-218ENST00000617172 PLEKHH1Q9ULM0 1364 aa14.12□□□□□ -0.15
TARDBP-218ENST00000617172 POGKQ9P215 609 aa14.12□□□□□ -0.15
TARDBP-218ENST00000617172 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
TARDBP-218ENST00000617172 AFF2P51816 1311 aa14.12□□□□□ -0.15
TARDBP-218ENST00000617172 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
TARDBP-218ENST00000617172 NGLY1Q96IV0 654 aa14.11□□□□□ -0.15
TARDBP-218ENST00000617172 C8orf37Q96NL8 207 aa14.11□□□□□ -0.15
TARDBP-218ENST00000617172 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
TARDBP-218ENST00000617172 LAMC1P11047 1609 aa14.11□□□□□ -0.15
TARDBP-218ENST00000617172 ADAMTS2O95450 1211 aa14.09□□□□□ -0.15
TARDBP-218ENST00000617172 QTRT2Q9H974 415 aaKnown RBP14.09□□□□□ -0.15
TARDBP-218ENST00000617172 KNDC1Q76NI1 1749 aa14.08□□□□□ -0.16
TARDBP-218ENST00000617172 PSME1Q06323 249 aa14.08□□□□□ -0.16
TARDBP-218ENST00000617172 RBM6P78332 1123 aaKnown RBP14.07□□□□□ -0.16
TARDBP-218ENST00000617172 SAFB2Q14151 953 aaKnown RBP eCLIP14.07□□□□□ -0.16
TARDBP-218ENST00000617172 PHF8Q9UPP1 1060 aa14.07□□□□□ -0.16
TARDBP-218ENST00000617172 TRAK1Q9UPV9 953 aa14.07□□□□□ -0.16
TARDBP-218ENST00000617172 XPCQ01831 940 aaPredicted RBP14.06□□□□□ -0.16
TARDBP-218ENST00000617172 KRT28Q7Z3Y7 464 aa14.06□□□□□ -0.16
TARDBP-218ENST00000617172 FNBP4Q8N3X1 1017 aaPredicted RBP14.06□□□□□ -0.16
TARDBP-218ENST00000617172 DLC1Q96QB1 1528 aa14.05□□□□□ -0.16
TARDBP-218ENST00000617172 USP21Q9UK80 565 aa14.05□□□□□ -0.16
TARDBP-218ENST00000617172 SPATA31A3Q5VYP0 1347 aa14.05□□□□□ -0.16
TARDBP-218ENST00000617172 PXDNQ92626 1479 aa14.05□□□□□ -0.16
TARDBP-218ENST00000617172 CDK12Q9NYV4 1490 aaPredicted RBP14.05□□□□□ -0.16
TARDBP-218ENST00000617172 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
TARDBP-218ENST00000617172 TRPC5Q9UL62 973 aaPredicted RBP14.03□□□□□ -0.16
TARDBP-218ENST00000617172 ADGRB1O14514 1584 aa14.03□□□□□ -0.16
TARDBP-218ENST00000617172 ANKARQ7Z5J8 1434 aa14.02□□□□□ -0.16
TARDBP-218ENST00000617172 WASLO00401 505 aaPredicted RBP14.01□□□□□ -0.17
TARDBP-218ENST00000617172 HIRIP3Q9BW71 556 aaPredicted RBP14.01□□□□□ -0.17
TARDBP-218ENST00000617172 FMN2Q9NZ56 1722 aa14.01□□□□□ -0.17
TARDBP-218ENST00000617172 SBNO1A3KN83 1393 aa14□□□□□ -0.17
TARDBP-218ENST00000617172 MINK1Q8N4C8 1332 aaPredicted RBP14□□□□□ -0.17
TARDBP-218ENST00000617172 UPF1Q92900 1129 aaKnown RBP eCLIP14□□□□□ -0.172e-11■■■□□ 15.1
TARDBP-218ENST00000617172 COL22A1Q8NFW1 1626 aaPredicted RBP14□□□□□ -0.17
TARDBP-218ENST00000617172 KIF1AQ12756 1690 aa13.99□□□□□ -0.17
TARDBP-218ENST00000617172 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
TARDBP-218ENST00000617172 PMFBP1Q8TBY8 1022 aa13.99□□□□□ -0.17
TARDBP-218ENST00000617172 ARHGEF10O15013 1369 aa13.98□□□□□ -0.17
TARDBP-218ENST00000617172 GPRASP1Q5JY77 1395 aa13.97□□□□□ -0.17
TARDBP-218ENST00000617172 LMOD2Q6P5Q4 547 aa13.97□□□□□ -0.17
TARDBP-218ENST00000617172 TNS3Q68CZ2 1445 aa13.97□□□□□ -0.17
TARDBP-218ENST00000617172 ADGRB2O60241 1585 aa13.96□□□□□ -0.17
TARDBP-218ENST00000617172 UNC5CLQ8IV45 518 aa13.96□□□□□ -0.17
TARDBP-218ENST00000617172 NGDNQ8NEJ9 315 aaKnown RBP13.96□□□□□ -0.17
TARDBP-218ENST00000617172 BCL9LQ86UU0 1499 aa13.95□□□□□ -0.18
TARDBP-218ENST00000617172 GJD4Q96KN9 370 aaPredicted RBP13.95□□□□□ -0.18
TARDBP-218ENST00000617172 ATRNO75882 1429 aa13.95□□□□□ -0.18
TARDBP-218ENST00000617172 PRR36Q9H6K5 1346 aa13.94□□□□□ -0.18
TARDBP-218ENST00000617172 RGS12O14924 1447 aa13.94□□□□□ -0.18
TARDBP-218ENST00000617172 NUDT16Q96DE0 195 aaKnown RBP13.94□□□□□ -0.18
TARDBP-218ENST00000617172 NBPF1Q3BBV0 1214 aa13.93□□□□□ -0.18
TARDBP-218ENST00000617172 CABLES1Q8TDN4 633 aa13.93□□□□□ -0.18
TARDBP-218ENST00000617172 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
TARDBP-218ENST00000617172 CDK19Q9BWU1 502 aa13.93□□□□□ -0.18
TARDBP-218ENST00000617172 CCDC61Q9Y6R9 512 aa13.93□□□□□ -0.18
TARDBP-218ENST00000617172 TULP4Q9NRJ4 1543 aa13.93□□□□□ -0.18
TARDBP-218ENST00000617172 ATAD2Q6PL18 1390 aa13.91□□□□□ -0.18
TARDBP-218ENST00000617172 SLIT2O94813 1529 aa13.9□□□□□ -0.18
TARDBP-218ENST00000617172 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
TARDBP-218ENST00000617172 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.19
TARDBP-218ENST00000617172 PLEKHG3A1L390 1219 aa13.89□□□□□ -0.19
TARDBP-218ENST00000617172 FAM83GA6ND36 823 aa13.89□□□□□ -0.19
TARDBP-218ENST00000617172 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
TARDBP-218ENST00000617172 NEUROD1Q13562 356 aa13.89□□□□□ -0.19
TARDBP-218ENST00000617172 VPS72Q15906 364 aa13.89□□□□□ -0.19
TARDBP-218ENST00000617172 SIN3AQ96ST3 1273 aa13.89□□□□□ -0.19
TARDBP-218ENST00000617172 KIAA1210Q9ULL0 1709 aa13.89□□□□□ -0.19
TARDBP-218ENST00000617172 USP32Q8NFA0 1604 aa13.89□□□□□ -0.19
TARDBP-218ENST00000617172 RGPD8O14715 1765 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-218ENST00000617172 CCDC125Q86Z20 511 aa13.88□□□□□ -0.19
TARDBP-218ENST00000617172 SRPK2P78362 688 aaKnown RBP13.87□□□□□ -0.19
TARDBP-218ENST00000617172 NBPF8Q3BBV2 869 aa13.87□□□□□ -0.19
TARDBP-218ENST00000617172 ACEP12821 1306 aa13.87□□□□□ -0.19
TARDBP-218ENST00000617172 ATP7BP35670 1465 aa13.87□□□□□ -0.19
TARDBP-218ENST00000617172 POLR3AO14802 1390 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-218ENST00000617172 ONECUT3O60422 494 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-218ENST00000617172 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
TARDBP-218ENST00000617172 ARHGEF28Q8N1W1 1705 aaKnown RBP13.85□□□□□ -0.19
TARDBP-218ENST00000617172 MARF1Q9Y4F3 1742 aaKnown RBP13.85□□□□□ -0.19
TARDBP-218ENST00000617172 BTG4Q9NY30 223 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms