RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 BECN2A8MW95 431 aa22.74■■□□□ 1.23
CDH23-212ENST00000616684 GOLGA6L19H0YKK7 550 aa22.74■■□□□ 1.23
CDH23-212ENST00000616684 BCAR3O75815 825 aa22.74■■□□□ 1.23
CDH23-212ENST00000616684 NUCB2P80303 420 aa22.74■■□□□ 1.23
CDH23-212ENST00000616684 RNF20Q5VTR2 975 aa22.74■■□□□ 1.23
CDH23-212ENST00000616684 G3V3G9 751 aa22.73■■□□□ 1.23
CDH23-212ENST00000616684 CDC45O75419 566 aa22.73■■□□□ 1.23
CDH23-212ENST00000616684 DCAF8Q5TAQ9 597 aa22.73■■□□□ 1.23
CDH23-212ENST00000616684 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
CDH23-212ENST00000616684 UBTFL1P0CB47 393 aaPredicted RBP22.72■■□□□ 1.23
CDH23-212ENST00000616684 PDZRN3Q9UPQ7 1066 aa22.72■■□□□ 1.23
CDH23-212ENST00000616684 TSR2Q969E8 191 aaKnown RBP22.72■■□□□ 1.23
CDH23-212ENST00000616684 HECW1Q76N89 1606 aa22.71■■□□□ 1.23
CDH23-212ENST00000616684 ERC2O15083 957 aa22.71■■□□□ 1.23
CDH23-212ENST00000616684 AKAP17AQ02040 695 aaKnown RBP22.7■■□□□ 1.23
CDH23-212ENST00000616684 SYNE3Q6ZMZ3 975 aa22.7■■□□□ 1.23
CDH23-212ENST00000616684 VPS37CA5D8V6 355 aaPredicted RBP22.69■■□□□ 1.22
CDH23-212ENST00000616684 TWISTNBQ3B726 338 aaPredicted RBP22.69■■□□□ 1.22
CDH23-212ENST00000616684 NLRP2Q9NX02 1062 aa22.69■■□□□ 1.22
CDH23-212ENST00000616684 AIMP1Q12904 312 aaKnown RBP22.69■■□□□ 1.22
CDH23-212ENST00000616684 ERBINQ96RT1 1412 aa22.69■■□□□ 1.22
CDH23-212ENST00000616684 SMC3Q9UQE7 1217 aa22.69■■□□□ 1.22
CDH23-212ENST00000616684 SNAPC4Q5SXM2 1469 aa22.68■■□□□ 1.22
CDH23-212ENST00000616684 CPLX1O14810 134 aa22.68■■□□□ 1.22
CDH23-212ENST00000616684 APPP05067 770 aa22.68■■□□□ 1.22
CDH23-212ENST00000616684 RIC3Q7Z5B4 369 aa22.68■■□□□ 1.22
CDH23-212ENST00000616684 GNAI3P08754 354 aa22.67■■□□□ 1.22
CDH23-212ENST00000616684 CABP1Q9NZU7 370 aa22.67■■□□□ 1.22
CDH23-212ENST00000616684 EPRSP07814 1512 aaKnown RBP22.67■■□□□ 1.22
CDH23-212ENST00000616684 GAS2L2Q8NHY3 880 aa22.67■■□□□ 1.22
CDH23-212ENST00000616684 TXNDC2Q86VQ3 553 aa22.66■■□□□ 1.22
CDH23-212ENST00000616684 SYTL4Q96C24 671 aaPredicted RBP22.66■■□□□ 1.22
CDH23-212ENST00000616684 SLC52A1Q9NWF4 448 aa22.66■■□□□ 1.22
CDH23-212ENST00000616684 SUPT6HQ7KZ85 1726 aaKnown RBP22.66■■□□□ 1.22
CDH23-212ENST00000616684 MARCH6O60337 910 aa22.66■■□□□ 1.22
CDH23-212ENST00000616684 AMER1Q5JTC6 1135 aaPredicted RBP22.66■■□□□ 1.22
CDH23-212ENST00000616684 CDK13Q14004 1512 aaKnown RBP22.66■■□□□ 1.22
CDH23-212ENST00000616684 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
CDH23-212ENST00000616684 ABTB2Q8N961 1025 aa22.65■■□□□ 1.22
CDH23-212ENST00000616684 BICD2Q8TD16 824 aa22.65■■□□□ 1.22
CDH23-212ENST00000616684 CDK19Q9BWU1 502 aa22.64■■□□□ 1.22
CDH23-212ENST00000616684 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.22
CDH23-212ENST00000616684 CCDC30Q5VVM6 783 aa22.64■■□□□ 1.21
CDH23-212ENST00000616684 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.21
CDH23-212ENST00000616684 NOB1Q9ULX3 412 aaKnown RBP22.64■■□□□ 1.21
CDH23-212ENST00000616684 TRDNQ13061 729 aa22.64■■□□□ 1.21
CDH23-212ENST00000616684 SURF6O75683 361 aaKnown RBP22.63■■□□□ 1.21
CDH23-212ENST00000616684 TPM3P06753 285 aa22.63■■□□□ 1.21
CDH23-212ENST00000616684 WDR63Q8IWG1 891 aa22.63■■□□□ 1.21
CDH23-212ENST00000616684 RSPH6AQ9H0K4 717 aa22.63■■□□□ 1.21
CDH23-212ENST00000616684 C1orf115Q9H7X2 142 aa22.63■■□□□ 1.21
CDH23-212ENST00000616684 PES1O00541 588 aaKnown RBP22.63■■□□□ 1.21
CDH23-212ENST00000616684 ATF3P18847 181 aa22.62■■□□□ 1.21
CDH23-212ENST00000616684 TRIM29Q14134 588 aa22.62■■□□□ 1.21
CDH23-212ENST00000616684 BACH2Q9BYV9 841 aa22.62■■□□□ 1.21
CDH23-212ENST00000616684 CLASRPQ8N2M8 674 aaKnown RBP22.62■■□□□ 1.21
CDH23-212ENST00000616684 TPD52L1Q16890 204 aaPredicted RBP22.62■■□□□ 1.21
CDH23-212ENST00000616684 SULT6B1Q6IMI4 303 aa22.62■■□□□ 1.21
CDH23-212ENST00000616684 NEUROD6Q96NK8 337 aa22.61■■□□□ 1.21
CDH23-212ENST00000616684 KIAA0586Q9BVV6 1533 aa22.61■■□□□ 1.21
CDH23-212ENST00000616684 GCC1Q96CN9 775 aa22.6■■□□□ 1.21
CDH23-212ENST00000616684 NOC3LQ8WTT2 800 aaKnown RBP22.6■■□□□ 1.21
CDH23-212ENST00000616684 RAPGEF3O95398 923 aa22.59■■□□□ 1.21
CDH23-212ENST00000616684 ANKRD30BQ9BXX2 1392 aa22.59■■□□□ 1.21
CDH23-212ENST00000616684 ATF7IPQ6VMQ6 1270 aa22.59■■□□□ 1.21
CDH23-212ENST00000616684 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
CDH23-212ENST00000616684 C11orf95C9JLR9 678 aaPredicted RBP22.58■■□□□ 1.21
CDH23-212ENST00000616684 CT47B1P0C2W7 299 aaPredicted RBP22.58■■□□□ 1.21
CDH23-212ENST00000616684 HSP90AA2PQ14568 343 aaPredicted RBP22.58■■□□□ 1.21
CDH23-212ENST00000616684 ZNF692Q9BU19 519 aaPredicted RBP22.57■■□□□ 1.2
CDH23-212ENST00000616684 SLC4A2P04920 1241 aa22.57■■□□□ 1.2
CDH23-212ENST00000616684 GPRASP1Q5JY77 1395 aa22.57■■□□□ 1.2
CDH23-212ENST00000616684 VPS53Q5VIR6 699 aa22.56■■□□□ 1.2
CDH23-212ENST00000616684 NEK4P51957 841 aa22.56■■□□□ 1.2
CDH23-212ENST00000616684 CNTROBQ8N137 903 aa22.56■■□□□ 1.2
CDH23-212ENST00000616684 RPGRIP1LQ68CZ1 1315 aa22.55■■□□□ 1.2
CDH23-212ENST00000616684 VPS37DQ86XT2 251 aa22.55■■□□□ 1.2
CDH23-212ENST00000616684 PCF11O94913 1555 aaKnown RBP22.55■■□□□ 1.2
CDH23-212ENST00000616684 MVPQ14764 893 aaKnown RBP22.55■■□□□ 1.2
CDH23-212ENST00000616684 ESCO1Q5FWF5 840 aa22.55■■□□□ 1.2
CDH23-212ENST00000616684 GNAI2P04899 355 aa22.54■■□□□ 1.2
CDH23-212ENST00000616684 TSR1Q2NL82 804 aaKnown RBP22.54■■□□□ 1.2
CDH23-212ENST00000616684 PLEKHO1Q53GL0 409 aaPredicted RBP22.54■■□□□ 1.2
CDH23-212ENST00000616684 FSD1Q9BTV5 496 aa22.54■■□□□ 1.2
CDH23-212ENST00000616684 NINLQ9Y2I6 1382 aa22.54■■□□□ 1.2
CDH23-212ENST00000616684 TRAK2O60296 914 aa22.53■■□□□ 1.2
CDH23-212ENST00000616684 HDGFL1Q5TGJ6 251 aa22.53■■□□□ 1.2
CDH23-212ENST00000616684 NFXL1Q6ZNB6 911 aa22.53■■□□□ 1.2
CDH23-212ENST00000616684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.53■■□□□ 1.2
CDH23-212ENST00000616684 WASHC4Q2M389 1173 aa22.53■■□□□ 1.2
CDH23-212ENST00000616684 RALYLQ86SE5 291 aaKnown RBP22.53■■□□□ 1.2
CDH23-212ENST00000616684 NOL10Q9BSC4 688 aaKnown RBP22.53■■□□□ 1.2
CDH23-212ENST00000616684 MRE11P49959 708 aa22.52■■□□□ 1.2
CDH23-212ENST00000616684 TPM1P09493 284 aa22.52■■□□□ 1.2
CDH23-212ENST00000616684 RABEP1Q15276 862 aa22.52■■□□□ 1.2
CDH23-212ENST00000616684 AMOTL1Q8IY63 956 aa22.52■■□□□ 1.2
CDH23-212ENST00000616684 FOSBP53539 338 aa22.51■■□□□ 1.19
CDH23-212ENST00000616684 SLFN5Q08AF3 891 aa22.51■■□□□ 1.19
CDH23-212ENST00000616684 GOLGA6L1Q8N7Z2 621 aa22.51■■□□□ 1.19
CDH23-212ENST00000616684 CCDC73Q6ZRK6 1079 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms