RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 CCDC7Q96M83 1385 aa16.19■□□□□ 0.18
TARDBP-217ENST00000616545 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
TARDBP-217ENST00000616545 PROSER2Q86WR7 435 aaPredicted RBP16.18■□□□□ 0.18
TARDBP-217ENST00000616545 KIF7Q2M1P5 1343 aa16.18■□□□□ 0.18
TARDBP-217ENST00000616545 WASHC2AQ641Q2 1341 aa16.18■□□□□ 0.18
TARDBP-217ENST00000616545 ADGRB2O60241 1585 aa16.17■□□□□ 0.18
TARDBP-217ENST00000616545 SAFB2Q14151 953 aaKnown RBP eCLIP16.17■□□□□ 0.18
TARDBP-217ENST00000616545 MINK1Q8N4C8 1332 aaPredicted RBP16.17■□□□□ 0.18
TARDBP-217ENST00000616545 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
TARDBP-217ENST00000616545 DISP3Q9P2K9 1392 aa16.16■□□□□ 0.18
TARDBP-217ENST00000616545 WASLO00401 505 aaPredicted RBP16.16■□□□□ 0.18
TARDBP-217ENST00000616545 NINLQ9Y2I6 1382 aa16.15■□□□□ 0.18
TARDBP-217ENST00000616545 C11orf95C9JLR9 678 aaPredicted RBP16.15■□□□□ 0.18
TARDBP-217ENST00000616545 ADGRL3Q9HAR2 1447 aa16.14■□□□□ 0.17
TARDBP-217ENST00000616545 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
TARDBP-217ENST00000616545 SRPK2P78362 688 aaKnown RBP16.13■□□□□ 0.17
TARDBP-217ENST00000616545 C19orf44Q9H6X5 657 aa16.13■□□□□ 0.17
TARDBP-217ENST00000616545 TULP4Q9NRJ4 1543 aa16.13■□□□□ 0.17
TARDBP-217ENST00000616545 ZNF335Q9H4Z2 1342 aaPredicted RBP16.13■□□□□ 0.17
TARDBP-217ENST00000616545 DCCP43146 1447 aa16.12■□□□□ 0.17
TARDBP-217ENST00000616545 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.12■□□□□ 0.17
TARDBP-217ENST00000616545 TMEM94Q12767 1356 aa16.12■□□□□ 0.17
TARDBP-217ENST00000616545 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
TARDBP-217ENST00000616545 CDC42BPGQ6DT37 1551 aa16.11■□□□□ 0.17
TARDBP-217ENST00000616545 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
TARDBP-217ENST00000616545 STRCP1A6NGW2 1772 aa16.1■□□□□ 0.17
TARDBP-217ENST00000616545 LRRC7Q96NW7 1537 aa16.09■□□□□ 0.17
TARDBP-217ENST00000616545 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
TARDBP-217ENST00000616545 POLR3GLQ9BT43 218 aa16.08■□□□□ 0.16
TARDBP-217ENST00000616545 CABP2Q9NPB3 220 aa16.08■□□□□ 0.16
TARDBP-217ENST00000616545 MSH6P52701 1360 aa16.08■□□□□ 0.16
TARDBP-217ENST00000616545 CADPS2Q86UW7 1296 aa16.07■□□□□ 0.16
TARDBP-217ENST00000616545 NUDT16Q96DE0 195 aaKnown RBP16.07■□□□□ 0.16
TARDBP-217ENST00000616545 ATF3P18847 181 aa16.06■□□□□ 0.16
TARDBP-217ENST00000616545 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
TARDBP-217ENST00000616545 NALCNQ8IZF0 1738 aa16.05■□□□□ 0.16
TARDBP-217ENST00000616545 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
TARDBP-217ENST00000616545 ATP7BP35670 1465 aa16.04■□□□□ 0.16
TARDBP-217ENST00000616545 PLEKHG3A1L390 1219 aa16.04■□□□□ 0.16
TARDBP-217ENST00000616545 TERF2IPQ9NYB0 399 aa16.04■□□□□ 0.16
TARDBP-217ENST00000616545 FMN2Q9NZ56 1722 aa16.03■□□□□ 0.16
TARDBP-217ENST00000616545 TMC1Q8TDI8 760 aa16.03■□□□□ 0.16
TARDBP-217ENST00000616545 ANKRD36BQ8N2N9 1353 aa16.02■□□□□ 0.16
TARDBP-217ENST00000616545 HDGFL2Q7Z4V5 671 aaPredicted RBP16.02■□□□□ 0.16
TARDBP-217ENST00000616545 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.16
TARDBP-217ENST00000616545 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
TARDBP-217ENST00000616545 PPIP5K1Q6PFW1 1433 aa16.02■□□□□ 0.15
TARDBP-217ENST00000616545 PRR36Q9H6K5 1346 aa16.01■□□□□ 0.15
TARDBP-217ENST00000616545 DIEXFQ68CQ4 756 aaKnown RBP16.01■□□□□ 0.15
TARDBP-217ENST00000616545 SLC12A5Q9H2X9 1139 aa16.01■□□□□ 0.15
TARDBP-217ENST00000616545 PANK3Q9H999 370 aa16.01■□□□□ 0.15
TARDBP-217ENST00000616545 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
TARDBP-217ENST00000616545 ITSN1Q15811 1721 aa16■□□□□ 0.15
TARDBP-217ENST00000616545 MYOM1P52179 1685 aa16■□□□□ 0.15
TARDBP-217ENST00000616545 IQSEC2Q5JU85 1478 aa16■□□□□ 0.15
TARDBP-217ENST00000616545 BRD4O60885 1362 aaPredicted RBP15.99■□□□□ 0.15
TARDBP-217ENST00000616545 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
TARDBP-217ENST00000616545 XIRP1Q702N8 1843 aaKnown RBP15.98■□□□□ 0.15
TARDBP-217ENST00000616545 CPSF1Q10570 1443 aaKnown RBP15.98■□□□□ 0.15
TARDBP-217ENST00000616545 KNSTRNQ9Y448 316 aa15.98■□□□□ 0.15
TARDBP-217ENST00000616545 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
TARDBP-217ENST00000616545 C1orf167Q5SNV9 1468 aa15.97■□□□□ 0.15
TARDBP-217ENST00000616545 MST1RQ04912 1400 aa15.97■□□□□ 0.15
TARDBP-217ENST00000616545 PER1O15534 1290 aaPredicted RBP15.97■□□□□ 0.15
TARDBP-217ENST00000616545 NPC1L1Q9UHC9 1359 aa15.97■□□□□ 0.15
TARDBP-217ENST00000616545 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
TARDBP-217ENST00000616545 PHF8Q9UPP1 1060 aa15.96■□□□□ 0.15
TARDBP-217ENST00000616545 ESCO1Q5FWF5 840 aa15.95■□□□□ 0.14
TARDBP-217ENST00000616545 NGDNQ8NEJ9 315 aaKnown RBP15.95■□□□□ 0.14
TARDBP-217ENST00000616545 A0A1W2PP64 1363 aa15.95■□□□□ 0.14
TARDBP-217ENST00000616545 ACEP12821 1306 aa15.94■□□□□ 0.14
TARDBP-217ENST00000616545 NUTM2FA1L443 756 aa15.94■□□□□ 0.14
TARDBP-217ENST00000616545 SLAIN2Q9P270 581 aa15.94■□□□□ 0.14
TARDBP-217ENST00000616545 KTN1Q86UP2 1357 aaKnown RBP15.94■□□□□ 0.14
TARDBP-217ENST00000616545 CD163L1Q9NR16 1453 aa15.94■□□□□ 0.14
TARDBP-217ENST00000616545 EDC4Q6P2E9 1401 aaKnown RBP15.94■□□□□ 0.14
TARDBP-217ENST00000616545 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
TARDBP-217ENST00000616545 KIF1AQ12756 1690 aa15.93■□□□□ 0.14
TARDBP-217ENST00000616545 NSD2O96028 1365 aa15.93■□□□□ 0.14
TARDBP-217ENST00000616545 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
TARDBP-217ENST00000616545 ANP32CO43423 234 aa15.92■□□□□ 0.14
TARDBP-217ENST00000616545 TOM1O60784 492 aa15.91■□□□□ 0.14
TARDBP-217ENST00000616545 USP6P35125 1406 aa15.91■□□□□ 0.14
TARDBP-217ENST00000616545 NSD3Q9BZ95 1437 aa15.91■□□□□ 0.14
TARDBP-217ENST00000616545 TTC21AQ8NDW8 1320 aa15.91■□□□□ 0.14
TARDBP-217ENST00000616545 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-217ENST00000616545 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
TARDBP-217ENST00000616545 ORAI2Q96SN7 254 aa15.9■□□□□ 0.14
TARDBP-217ENST00000616545 AKAP12Q02952 1782 aa15.9■□□□□ 0.14
TARDBP-217ENST00000616545 PSME1Q06323 249 aa15.89■□□□□ 0.13
TARDBP-217ENST00000616545 RALBP1Q15311 655 aa15.89■□□□□ 0.13
TARDBP-217ENST00000616545 RGPD8O14715 1765 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-217ENST00000616545 NPHP3Q7Z494 1330 aa15.89■□□□□ 0.13
TARDBP-217ENST00000616545 SSH2Q76I76 1423 aa15.88■□□□□ 0.13
TARDBP-217ENST00000616545 CERKQ8TCT0 537 aa15.88■□□□□ 0.13
TARDBP-217ENST00000616545 MON2Q7Z3U7 1717 aa15.88■□□□□ 0.13
TARDBP-217ENST00000616545 BRINP3Q76B58 766 aa15.87■□□□□ 0.13
TARDBP-217ENST00000616545 TTC21BQ7Z4L5 1316 aa15.86■□□□□ 0.13
TARDBP-217ENST00000616545 FOXO3O43524 673 aa15.85■□□□□ 0.13
TARDBP-217ENST00000616545 PRKRIP1Q9H875 184 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms