RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 DDX17Q92841 729 aaKnown RBP25.26■■□□□ 1.63
CCL3-204ENST00000613922 LRRC59Q96AG4 307 aaKnown RBP25.26■■□□□ 1.63
CCL3-204ENST00000613922 ORAI2Q96SN7 254 aa25.24■■□□□ 1.63
CCL3-204ENST00000613922 WAPLQ7Z5K2 1190 aa25.23■■□□□ 1.63
CCL3-204ENST00000613922 PLEKHH1Q9ULM0 1364 aa25.22■■□□□ 1.63
CCL3-204ENST00000613922 SIRT1Q96EB6 747 aa25.22■■□□□ 1.63
CCL3-204ENST00000613922 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
CCL3-204ENST00000613922 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
CCL3-204ENST00000613922 SOS2Q07890 1332 aaPredicted RBP25.2■■□□□ 1.62
CCL3-204ENST00000613922 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.62
CCL3-204ENST00000613922 MEX3CQ5U5Q3 659 aaKnown RBP25.19■■□□□ 1.62
CCL3-204ENST00000613922 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
CCL3-204ENST00000613922 NUTM2BA6NNL0 878 aaPredicted RBP25.16■■□□□ 1.62
CCL3-204ENST00000613922 NUTM2EB1AL46 878 aaPredicted RBP25.16■■□□□ 1.62
CCL3-204ENST00000613922 ADGRB1O14514 1584 aa25.16■■□□□ 1.62
CCL3-204ENST00000613922 NUTM2AQ8IVF1 878 aaPredicted RBP25.16■■□□□ 1.62
CCL3-204ENST00000613922 DLC1Q96QB1 1528 aa25.16■■□□□ 1.62
CCL3-204ENST00000613922 ZNF772Q68DY9 489 aaPredicted RBP25.14■■□□□ 1.62
CCL3-204ENST00000613922 STAC3Q96MF2 364 aa25.14■■□□□ 1.62
CCL3-204ENST00000613922 ESCO1Q5FWF5 840 aa25.13■■□□□ 1.61
CCL3-204ENST00000613922 COL22A1Q8NFW1 1626 aaPredicted RBP25.12■■□□□ 1.61
CCL3-204ENST00000613922 RGPD8O14715 1765 aaPredicted RBP25.12■■□□□ 1.61
CCL3-204ENST00000613922 NPHP3Q7Z494 1330 aa25.12■■□□□ 1.61
CCL3-204ENST00000613922 PXDNQ92626 1479 aa25.11■■□□□ 1.61
CCL3-204ENST00000613922 KIF1AQ12756 1690 aa25.1■■□□□ 1.61
CCL3-204ENST00000613922 DCAF11Q8TEB1 546 aa25.1■■□□□ 1.61
CCL3-204ENST00000613922 KDM2AQ9Y2K7 1162 aa25.09■■□□□ 1.61
CCL3-204ENST00000613922 NUTM2FA1L443 756 aa25.07■■□□□ 1.6
CCL3-204ENST00000613922 PRAM1Q96QH2 718 aa25.07■■□□□ 1.6
CCL3-204ENST00000613922 AFF2P51816 1311 aa25.07■■□□□ 1.6
CCL3-204ENST00000613922 ADGRB2O60241 1585 aa25.06■■□□□ 1.6
CCL3-204ENST00000613922 FOXO3O43524 673 aa25.05■■□□□ 1.6
CCL3-204ENST00000613922 C8orf37Q96NL8 207 aa25.03■■□□□ 1.6
CCL3-204ENST00000613922 POGKQ9P215 609 aa25.02■■□□□ 1.6
CCL3-204ENST00000613922 MARF1Q9Y4F3 1742 aaKnown RBP25.01■■□□□ 1.59
CCL3-204ENST00000613922 SAFB2Q14151 953 aaKnown RBP eCLIP25.01■■□□□ 1.59
CCL3-204ENST00000613922 TRAK1Q9UPV9 953 aa25.01■■□□□ 1.59
CCL3-204ENST00000613922 USP32Q8NFA0 1604 aa25.01■■□□□ 1.59
CCL3-204ENST00000613922 XPCQ01831 940 aaPredicted RBP25■■□□□ 1.59
CCL3-204ENST00000613922 ARHGEF28Q8N1W1 1705 aaKnown RBP25■■□□□ 1.59
CCL3-204ENST00000613922 KIAA1210Q9ULL0 1709 aa25■■□□□ 1.59
CCL3-204ENST00000613922 ADAMTS2O95450 1211 aa24.99■■□□□ 1.59
CCL3-204ENST00000613922 CDK12Q9NYV4 1490 aaPredicted RBP24.99■■□□□ 1.59
CCL3-204ENST00000613922 ANKARQ7Z5J8 1434 aa24.98■■□□□ 1.59
CCL3-204ENST00000613922 RXRBP28702 533 aa24.98■■□□□ 1.59
CCL3-204ENST00000613922 PHF8Q9UPP1 1060 aa24.97■■□□□ 1.59
CCL3-204ENST00000613922 SPATA31A3Q5VYP0 1347 aa24.95■■□□□ 1.58
CCL3-204ENST00000613922 NGLY1Q96IV0 654 aa24.95■■□□□ 1.58
CCL3-204ENST00000613922 KRT28Q7Z3Y7 464 aa24.94■■□□□ 1.58
CCL3-204ENST00000613922 QTRT2Q9H974 415 aaKnown RBP24.93■■□□□ 1.58
CCL3-204ENST00000613922 FNBP4Q8N3X1 1017 aaPredicted RBP24.92■■□□□ 1.58
CCL3-204ENST00000613922 TULP4Q9NRJ4 1543 aa24.91■■□□□ 1.58
CCL3-204ENST00000613922 MINK1Q8N4C8 1332 aaPredicted RBP24.91■■□□□ 1.58
CCL3-204ENST00000613922 EIF3AQ14152 1382 aaKnown RBP24.91■■□□□ 1.58
CCL3-204ENST00000613922 TNS3Q68CZ2 1445 aa24.9■■□□□ 1.58
CCL3-204ENST00000613922 RBM6P78332 1123 aaKnown RBP24.9■■□□□ 1.58
CCL3-204ENST00000613922 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
CCL3-204ENST00000613922 SBNO1A3KN83 1393 aa24.9■■□□□ 1.58
CCL3-204ENST00000613922 PSME1Q06323 249 aa24.89■■□□□ 1.58
CCL3-204ENST00000613922 WASLO00401 505 aaPredicted RBP24.88■■□□□ 1.57
CCL3-204ENST00000613922 USP21Q9UK80 565 aa24.88■■□□□ 1.57
CCL3-204ENST00000613922 PRR36Q9H6K5 1346 aa24.87■■□□□ 1.57
CCL3-204ENST00000613922 TRPM3Q9HCF6 1732 aaPredicted RBP24.87■■□□□ 1.57
CCL3-204ENST00000613922 RGS12O14924 1447 aa24.86■■□□□ 1.57
CCL3-204ENST00000613922 ATRNO75882 1429 aa24.86■■□□□ 1.57
CCL3-204ENST00000613922 ITSN1Q15811 1721 aa24.86■■□□□ 1.57
CCL3-204ENST00000613922 ABCA3Q99758 1704 aa24.86■■□□□ 1.57
CCL3-204ENST00000613922 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.86■■□□□ 1.57
CCL3-204ENST00000613922 PMFBP1Q8TBY8 1022 aa24.85■■□□□ 1.57
CCL3-204ENST00000613922 TRPC5Q9UL62 973 aaPredicted RBP24.85■■□□□ 1.57
CCL3-204ENST00000613922 BCL9LQ86UU0 1499 aa24.84■■□□□ 1.57
CCL3-204ENST00000613922 ARHGEF10O15013 1369 aa24.82■■□□□ 1.56
CCL3-204ENST00000613922 ALS2Q96Q42 1657 aa24.82■■□□□ 1.56
CCL3-204ENST00000613922 NBPF1Q3BBV0 1214 aa24.82■■□□□ 1.56
CCL3-204ENST00000613922 UPF1Q92900 1129 aaKnown RBP eCLIP24.81■■□□□ 1.56
CCL3-204ENST00000613922 ATP7BP35670 1465 aa24.81■■□□□ 1.56
CCL3-204ENST00000613922 SLIT2O94813 1529 aa24.8■■□□□ 1.56
CCL3-204ENST00000613922 TOPAZ1Q8N9V7 1692 aa24.78■■□□□ 1.56
CCL3-204ENST00000613922 L3MBTL2Q969R5 705 aa24.78■■□□□ 1.56
CCL3-204ENST00000613922 GPRASP1Q5JY77 1395 aa24.78■■□□□ 1.56
CCL3-204ENST00000613922 SIN3AQ96ST3 1273 aa24.77■■□□□ 1.56
CCL3-204ENST00000613922 PLCH1Q4KWH8 1693 aa24.75■■□□□ 1.55
CCL3-204ENST00000613922 NWD2Q9ULI1 1742 aa24.75■■□□□ 1.55
CCL3-204ENST00000613922 CABLES1Q8TDN4 633 aa24.75■■□□□ 1.55
CCL3-204ENST00000613922 NUDT16Q96DE0 195 aaKnown RBP24.75■■□□□ 1.55
CCL3-204ENST00000613922 CDK19Q9BWU1 502 aa24.75■■□□□ 1.55
CCL3-204ENST00000613922 TRPM1Q7Z4N2 1603 aa24.75■■□□□ 1.55
CCL3-204ENST00000613922 LMOD2Q6P5Q4 547 aa24.74■■□□□ 1.55
CCL3-204ENST00000613922 CRYBG1Q9Y4K1 1723 aa24.74■■□□□ 1.55
CCL3-204ENST00000613922 UNC5CLQ8IV45 518 aa24.73■■□□□ 1.55
CCL3-204ENST00000613922 NGDNQ8NEJ9 315 aaKnown RBP24.73■■□□□ 1.55
CCL3-204ENST00000613922 QRICH2Q9H0J4 1663 aa24.72■■□□□ 1.55
CCL3-204ENST00000613922 HAP1P54257 671 aaPredicted RBP24.72■■□□□ 1.55
CCL3-204ENST00000613922 GJD4Q96KN9 370 aaPredicted RBP24.71■■□□□ 1.55
CCL3-204ENST00000613922 GLI3P10071 1580 aa24.71■■□□□ 1.55
CCL3-204ENST00000613922 CENPJQ9HC77 1338 aaPredicted RBP24.7■■□□□ 1.54
CCL3-204ENST00000613922 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
CCL3-204ENST00000613922 POLR3AO14802 1390 aaPredicted RBP24.68■■□□□ 1.54
CCL3-204ENST00000613922 CCDC61Q9Y6R9 512 aa24.68■■□□□ 1.54
CCL3-204ENST00000613922 RALGAPBQ86X10 1494 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms