RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM228B-208	ENST00000613899	C14orf93	Q9H972	538 aa	Known RBP	33.4	■■■□□ 2.94
FAM228B-208	ENST00000613899	POTEA	Q6S8J7	498 aa		33.39	■■■□□ 2.94
FAM228B-208	ENST00000613899	DDX17	Q92841	729 aa	Known RBP	33.37	■■■□□ 2.93
FAM228B-208	ENST00000613899	WAPL	Q7Z5K2	1190 aa		33.36	■■■□□ 2.93
FAM228B-208	ENST00000613899	ORAI2	Q96SN7	254 aa		33.36	■■■□□ 2.93
FAM228B-208	ENST00000613899	DHX57	Q6P158	1386 aa	Known RBP	33.34	■■■□□ 2.93
FAM228B-208	ENST00000613899	PNPLA6	Q8IY17	1366 aa		33.34	■■■□□ 2.93
FAM228B-208	ENST00000613899	PLEKHH1	Q9ULM0	1364 aa		33.34	■■■□□ 2.93
FAM228B-208	ENST00000613899	CFAP70	Q5T0N1	1121 aa		33.33	■■■□□ 2.93
FAM228B-208	ENST00000613899	SIRT1	Q96EB6	747 aa		33.31	■■■□□ 2.92
FAM228B-208	ENST00000613899	FMN2	Q9NZ56	1722 aa		33.31	■■■□□ 2.92
FAM228B-208	ENST00000613899	SOS2	Q07890	1332 aa	Predicted RBP	33.3	■■■□□ 2.92
FAM228B-208	ENST00000613899	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.3	■■■□□ 2.92
FAM228B-208	ENST00000613899	NUTM2E	B1AL46	878 aa	Predicted RBP	33.3	■■■□□ 2.92
FAM228B-208	ENST00000613899	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.3	■■■□□ 2.92
FAM228B-208	ENST00000613899	ZNF772	Q68DY9	489 aa	Predicted RBP	33.28	■■■□□ 2.92
FAM228B-208	ENST00000613899	ESCO1	Q5FWF5	840 aa		33.27	■■■□□ 2.92
FAM228B-208	ENST00000613899	STAC3	Q96MF2	364 aa		33.27	■■■□□ 2.92
FAM228B-208	ENST00000613899	DLC1	Q96QB1	1528 aa		33.27	■■■□□ 2.92
FAM228B-208	ENST00000613899	NPHP3	Q7Z494	1330 aa		33.27	■■■□□ 2.92
FAM228B-208	ENST00000613899	ADGRB1	O14514	1584 aa		33.25	■■■□□ 2.91
FAM228B-208	ENST00000613899	DCAF11	Q8TEB1	546 aa		33.23	■■■□□ 2.91
FAM228B-208	ENST00000613899	KIF1A	Q12756	1690 aa		33.23	■■■□□ 2.91
FAM228B-208	ENST00000613899	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.2	■■■□□ 2.91
FAM228B-208	ENST00000613899	PXDN	Q92626	1479 aa		33.2	■■■□□ 2.91
FAM228B-208	ENST00000613899	KDM2A	Q9Y2K7	1162 aa		33.2	■■■□□ 2.91
FAM228B-208	ENST00000613899	NUTM2F	A1L443	756 aa		33.19	■■■□□ 2.9
FAM228B-208	ENST00000613899	PRAM1	Q96QH2	718 aa		33.18	■■■□□ 2.9
FAM228B-208	ENST00000613899	ADGRB2	O60241	1585 aa		33.16	■■■□□ 2.9
FAM228B-208	ENST00000613899	AFF2	P51816	1311 aa		33.15	■■■□□ 2.9
FAM228B-208	ENST00000613899	FOXO3	O43524	673 aa		33.14	■■■□□ 2.9
FAM228B-208	ENST00000613899	POGK	Q9P215	609 aa		33.14	■■■□□ 2.9
FAM228B-208	ENST00000613899	C8orf37	Q96NL8	207 aa		33.13	■■■□□ 2.89
FAM228B-208	ENST00000613899	RGPD8	O14715	1765 aa	Predicted RBP	33.12	■■■□□ 2.89
FAM228B-208	ENST00000613899	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.12	■■■□□ 2.89
FAM228B-208	ENST00000613899	TRAK1	Q9UPV9	953 aa		33.09	■■■□□ 2.89
FAM228B-208	ENST00000613899	ADAMTS2	O95450	1211 aa		33.08	■■■□□ 2.89
FAM228B-208	ENST00000613899	XPC	Q01831	940 aa	Predicted RBP	33.08	■■■□□ 2.89
FAM228B-208	ENST00000613899	ANKAR	Q7Z5J8	1434 aa		33.07	■■■□□ 2.88
FAM228B-208	ENST00000613899	RXRB	P28702	533 aa		33.06	■■■□□ 2.88
FAM228B-208	ENST00000613899	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.05	■■■□□ 2.88
FAM228B-208	ENST00000613899	KIAA1210	Q9ULL0	1709 aa		33.05	■■■□□ 2.88
FAM228B-208	ENST00000613899	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.05	■■■□□ 2.88
FAM228B-208	ENST00000613899	NGLY1	Q96IV0	654 aa		33.04	■■■□□ 2.88
FAM228B-208	ENST00000613899	USP32	Q8NFA0	1604 aa		33.03	■■■□□ 2.88
FAM228B-208	ENST00000613899	PHF8	Q9UPP1	1060 aa		33.03	■■■□□ 2.88
FAM228B-208	ENST00000613899	EIF3A	Q14152	1382 aa	Known RBP	33.03	■■■□□ 2.88
FAM228B-208	ENST00000613899	MARF1	Q9Y4F3	1742 aa	Known RBP	33.02	■■■□□ 2.88
FAM228B-208	ENST00000613899	SPATA31A3	Q5VYP0	1347 aa		32.99	■■■□□ 2.87
FAM228B-208	ENST00000613899	KRT28	Q7Z3Y7	464 aa		32.98	■■■□□ 2.87
FAM228B-208	ENST00000613899	TULP4	Q9NRJ4	1543 aa		32.97	■■■□□ 2.87
FAM228B-208	ENST00000613899	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.97	■■■□□ 2.87
FAM228B-208	ENST00000613899	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.97	■■■□□ 2.87
FAM228B-208	ENST00000613899	TNS3	Q68CZ2	1445 aa		32.96	■■■□□ 2.87
FAM228B-208	ENST00000613899	PSME1	Q06323	249 aa		32.96	■■■□□ 2.87
FAM228B-208	ENST00000613899	QTRT2	Q9H974	415 aa	Known RBP	32.96	■■■□□ 2.87
FAM228B-208	ENST00000613899	RBM6	P78332	1123 aa	Known RBP	32.94	■■■□□ 2.86
FAM228B-208	ENST00000613899	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.93	■■■□□ 2.86
FAM228B-208	ENST00000613899	USP21	Q9UK80	565 aa		32.93	■■■□□ 2.86
FAM228B-208	ENST00000613899	SBNO1	A3KN83	1393 aa		32.92	■■■□□ 2.86
FAM228B-208	ENST00000613899	WASL	O00401	505 aa	Predicted RBP	32.91	■■■□□ 2.86
FAM228B-208	ENST00000613899	ITSN1	Q15811	1721 aa		32.89	■■■□□ 2.86
FAM228B-208	ENST00000613899	RGS12	O14924	1447 aa		32.89	■■■□□ 2.86
FAM228B-208	ENST00000613899	PMFBP1	Q8TBY8	1022 aa		32.88	■■■□□ 2.85
FAM228B-208	ENST00000613899	TRPC5	Q9UL62	973 aa	Predicted RBP	32.88	■■■□□ 2.85
FAM228B-208	ENST00000613899	ARHGEF10	O15013	1369 aa		32.87	■■■□□ 2.85
FAM228B-208	ENST00000613899	PRR36	Q9H6K5	1346 aa		32.86	■■■□□ 2.85
FAM228B-208	ENST00000613899	ATRN	O75882	1429 aa		32.85	■■■□□ 2.85
FAM228B-208	ENST00000613899	ABCA3	Q99758	1704 aa		32.85	■■■□□ 2.85
FAM228B-208	ENST00000613899	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.85	■■■□□ 2.85
FAM228B-208	ENST00000613899	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.85	■■■□□ 2.85
FAM228B-208	ENST00000613899	GPRASP1	Q5JY77	1395 aa		32.83	■■■□□ 2.85
FAM228B-208	ENST00000613899	ATP7B	P35670	1465 aa		32.83	■■■□□ 2.85
FAM228B-208	ENST00000613899	BCL9L	Q86UU0	1499 aa		32.82	■■■□□ 2.84
FAM228B-208	ENST00000613899	HAP1	P54257	671 aa	Predicted RBP	32.82	■■■□□ 2.84
FAM228B-208	ENST00000613899	LMOD2	Q6P5Q4	547 aa		32.8	■■■□□ 2.84
FAM228B-208	ENST00000613899	ALS2	Q96Q42	1657 aa		32.79	■■■□□ 2.84
FAM228B-208	ENST00000613899	NBPF1	Q3BBV0	1214 aa		32.79	■■■□□ 2.84
FAM228B-208	ENST00000613899	SLIT2	O94813	1529 aa		32.78	■■■□□ 2.84
FAM228B-208	ENST00000613899	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.77	■■■□□ 2.84
FAM228B-208	ENST00000613899	L3MBTL2	Q969R5	705 aa		32.77	■■■□□ 2.84
FAM228B-208	ENST00000613899	NGDN	Q8NEJ9	315 aa	Known RBP	32.76	■■■□□ 2.83
FAM228B-208	ENST00000613899	TOPAZ1	Q8N9V7	1692 aa		32.75	■■■□□ 2.83
FAM228B-208	ENST00000613899	NUDT16	Q96DE0	195 aa	Known RBP	32.74	■■■□□ 2.83
FAM228B-208	ENST00000613899	SIN3A	Q96ST3	1273 aa		32.74	■■■□□ 2.83
FAM228B-208	ENST00000613899	PLCH1	Q4KWH8	1693 aa		32.73	■■■□□ 2.83
FAM228B-208	ENST00000613899	CABLES1	Q8TDN4	633 aa		32.73	■■■□□ 2.83
FAM228B-208	ENST00000613899	CDK19	Q9BWU1	502 aa		32.73	■■■□□ 2.83
FAM228B-208	ENST00000613899	TRPM1	Q7Z4N2	1603 aa		32.73	■■■□□ 2.83
FAM228B-208	ENST00000613899	NWD2	Q9ULI1	1742 aa		32.72	■■■□□ 2.83
FAM228B-208	ENST00000613899	UNC5CL	Q8IV45	518 aa		32.71	■■■□□ 2.83
FAM228B-208	ENST00000613899	QRICH2	Q9H0J4	1663 aa		32.71	■■■□□ 2.83
FAM228B-208	ENST00000613899	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.7	■■■□□ 2.82
FAM228B-208	ENST00000613899	PLEKHG5	O94827	1062 aa		32.69	■■■□□ 2.82
FAM228B-208	ENST00000613899	NEUROD1	Q13562	356 aa		32.69	■■■□□ 2.82
FAM228B-208	ENST00000613899	GJD4	Q96KN9	370 aa	Predicted RBP	32.68	■■■□□ 2.82
FAM228B-208	ENST00000613899	CRYBG1	Q9Y4K1	1723 aa		32.66	■■■□□ 2.82
FAM228B-208	ENST00000613899	CCDC61	Q9Y6R9	512 aa		32.65	■■■□□ 2.82
FAM228B-208	ENST00000613899	ATAD2	Q6PL18	1390 aa		32.65	■■■□□ 2.82
FAM228B-208	ENST00000613899	POLR3A	O14802	1390 aa	Predicted RBP	32.64	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms