RNA–Protein interactions for RNA: ENST00000613593.1

PCDHA12-202, Transcript of protocadherin alpha 12, humanhuman

BASIC

Gene PCDHA12, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-202ENST00000613593 FAM43AQ8N2R8 423 aa22.39■■□□□ 1.17
PCDHA12-202ENST00000613593 BCL2L13Q9BXK5 485 aa22.39■■□□□ 1.17
PCDHA12-202ENST00000613593 MAP3K4Q9Y6R4 1608 aa22.39■■□□□ 1.17
PCDHA12-202ENST00000613593 ANTXR1Q9H6X2 564 aa22.39■■□□□ 1.17
PCDHA12-202ENST00000613593 RARSP54136 660 aaKnown RBP22.38■■□□□ 1.17
PCDHA12-202ENST00000613593 PPRC1Q5VV67 1664 aaKnown RBP22.38■■□□□ 1.17
PCDHA12-202ENST00000613593 LMTK2Q8IWU2 1503 aa22.38■■□□□ 1.17
PCDHA12-202ENST00000613593 ABCA6Q8N139 1617 aa22.37■■□□□ 1.17
PCDHA12-202ENST00000613593 PDZRN3Q9UPQ7 1066 aa22.36■■□□□ 1.17
PCDHA12-202ENST00000613593 KIF1BO60333 1816 aa22.36■■□□□ 1.17
PCDHA12-202ENST00000613593 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
PCDHA12-202ENST00000613593 ADGRF5Q8IZF2 1346 aa22.36■■□□□ 1.17
PCDHA12-202ENST00000613593 TBC1D2Q9BYX2 928 aa22.35■■□□□ 1.17
PCDHA12-202ENST00000613593 NGEFQ8N5V2 710 aa22.34■■□□□ 1.17
PCDHA12-202ENST00000613593 SPRYD3Q8NCJ5 442 aa22.34■■□□□ 1.17
PCDHA12-202ENST00000613593 NINLQ9Y2I6 1382 aa22.34■■□□□ 1.17
PCDHA12-202ENST00000613593 TBC1D32Q96NH3 1257 aa22.33■■□□□ 1.17
PCDHA12-202ENST00000613593 IFT172Q9UG01 1749 aa22.33■■□□□ 1.16
PCDHA12-202ENST00000613593 POLR3AO14802 1390 aaPredicted RBP22.33■■□□□ 1.16
PCDHA12-202ENST00000613593 TCP11L2Q8N4U5 519 aa22.33■■□□□ 1.16
PCDHA12-202ENST00000613593 MROH2AA6NES4 1674 aa22.32■■□□□ 1.16
PCDHA12-202ENST00000613593 PMFBP1Q8TBY8 1022 aa22.32■■□□□ 1.16
PCDHA12-202ENST00000613593 ARXQ96QS3 562 aa22.32■■□□□ 1.16
PCDHA12-202ENST00000613593 CD109Q6YHK3 1445 aa22.32■■□□□ 1.16
PCDHA12-202ENST00000613593 POGZQ7Z3K3 1410 aa22.32■■□□□ 1.16
PCDHA12-202ENST00000613593 CFAP74Q9C0B2 1584 aa22.31■■□□□ 1.16
PCDHA12-202ENST00000613593 RRAGDQ9NQL2 400 aaPredicted RBP22.31■■□□□ 1.16
PCDHA12-202ENST00000613593 NRXN1Q9ULB1 1477 aa22.3■■□□□ 1.16
PCDHA12-202ENST00000613593 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
PCDHA12-202ENST00000613593 MORC1Q86VD1 984 aa22.3■■□□□ 1.16
PCDHA12-202ENST00000613593 RUNDC1Q96C34 613 aa22.3■■□□□ 1.16
PCDHA12-202ENST00000613593 SLC24A1O60721 1099 aa22.29■■□□□ 1.16
PCDHA12-202ENST00000613593 ADGRB3O60242 1522 aa22.29■■□□□ 1.16
PCDHA12-202ENST00000613593 MLH3Q9UHC1 1453 aa22.29■■□□□ 1.16
PCDHA12-202ENST00000613593 FRMPD1Q5SYB0 1578 aa22.29■■□□□ 1.16
PCDHA12-202ENST00000613593 UPF2Q9HAU5 1272 aaKnown RBP22.28■■□□□ 1.16
PCDHA12-202ENST00000613593 SLC12A5Q9H2X9 1139 aa22.27■■□□□ 1.16
PCDHA12-202ENST00000613593 SHPRHQ149N8 1683 aa22.26■■□□□ 1.15
PCDHA12-202ENST00000613593 HECW2Q9P2P5 1572 aa22.26■■□□□ 1.15
PCDHA12-202ENST00000613593 NPATQ14207 1427 aa22.26■■□□□ 1.15
PCDHA12-202ENST00000613593 NSD3Q9BZ95 1437 aa22.26■■□□□ 1.15
PCDHA12-202ENST00000613593 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
PCDHA12-202ENST00000613593 NOS1P29475 1434 aa22.25■■□□□ 1.15
PCDHA12-202ENST00000613593 RSPH6AQ9H0K4 717 aa22.25■■□□□ 1.15
PCDHA12-202ENST00000613593 RWDD1Q9H446 243 aaPredicted RBP22.24■■□□□ 1.15
PCDHA12-202ENST00000613593 MYO3AQ8NEV4 1616 aa22.23■■□□□ 1.15
PCDHA12-202ENST00000613593 GZF1Q9H116 711 aaPredicted RBP22.23■■□□□ 1.15
PCDHA12-202ENST00000613593 MTHFSP49914 203 aa22.22■■□□□ 1.15
PCDHA12-202ENST00000613593 L1TD1Q5T7N2 865 aaKnown RBP22.22■■□□□ 1.15
PCDHA12-202ENST00000613593 GGT6Q6P531 493 aa22.22■■□□□ 1.15
PCDHA12-202ENST00000613593 WDR63Q8IWG1 891 aa22.22■■□□□ 1.15
PCDHA12-202ENST00000613593 SBNO2Q9Y2G9 1366 aa22.22■■□□□ 1.15
PCDHA12-202ENST00000613593 IQSEC2Q5JU85 1478 aa22.22■■□□□ 1.15
PCDHA12-202ENST00000613593 CHGAP10645 457 aaKnown RBP22.22■■□□□ 1.15
PCDHA12-202ENST00000613593 SETBP1Q9Y6X0 1596 aa22.21■■□□□ 1.15
PCDHA12-202ENST00000613593 XRCC6P12956 609 aaKnown RBP eCLIP22.21■■□□□ 1.15
PCDHA12-202ENST00000613593 TRAK1Q9UPV9 953 aa22.21■■□□□ 1.15
PCDHA12-202ENST00000613593 MCM4P33991 863 aa22.19■■□□□ 1.14
PCDHA12-202ENST00000613593 AAMPQ13685 434 aa22.19■■□□□ 1.14
PCDHA12-202ENST00000613593 MVPQ14764 893 aaKnown RBP22.19■■□□□ 1.14
PCDHA12-202ENST00000613593 ABCC3O15438 1527 aa22.18■■□□□ 1.14
PCDHA12-202ENST00000613593 MFAP1P55081 439 aaKnown RBP22.18■■□□□ 1.14
PCDHA12-202ENST00000613593 UBE2Q2Q8WVN8 375 aa22.18■■□□□ 1.14
PCDHA12-202ENST00000613593 PANK2Q9BZ23 570 aa22.18■■□□□ 1.14
PCDHA12-202ENST00000613593 PPLO60437 1756 aa22.18■■□□□ 1.14
PCDHA12-202ENST00000613593 C22orf23Q9BZE7 217 aa22.17■■□□□ 1.14
PCDHA12-202ENST00000613593 TSR2Q969E8 191 aaKnown RBP22.16■■□□□ 1.14
PCDHA12-202ENST00000613593 NEO1Q92859 1461 aa22.15■■□□□ 1.14
PCDHA12-202ENST00000613593 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
PCDHA12-202ENST00000613593 C14orf93Q9H972 538 aaKnown RBP22.15■■□□□ 1.14
PCDHA12-202ENST00000613593 FSD2A1L4K1 749 aa22.15■■□□□ 1.14
PCDHA12-202ENST00000613593 GOLGA6L3A6NEY3 463 aa22.15■■□□□ 1.14
PCDHA12-202ENST00000613593 TMEM132EQ6IEE7 984 aa22.14■■□□□ 1.14
PCDHA12-202ENST00000613593 DZIP1LQ8IYY4 767 aaKnown RBP22.14■■□□□ 1.14
PCDHA12-202ENST00000613593 CFAP65Q6ZU64 1925 aaKnown RBP22.14■■□□□ 1.13
PCDHA12-202ENST00000613593 CCDC27Q2M243 656 aa22.14■■□□□ 1.13
PCDHA12-202ENST00000613593 ZKSCAN2Q63HK3 967 aa22.14■■□□□ 1.13
PCDHA12-202ENST00000613593 ADGRB1O14514 1584 aa22.13■■□□□ 1.13
PCDHA12-202ENST00000613593 FTSJ3Q8IY81 847 aaKnown RBP22.13■■□□□ 1.13
PCDHA12-202ENST00000613593 RPGRIP1LQ68CZ1 1315 aa22.13■■□□□ 1.13
PCDHA12-202ENST00000613593 U2AF1L5P0DN76 240 aaPredicted RBP22.13■■□□□ 1.13
PCDHA12-202ENST00000613593 U2AF1Q01081 240 aaKnown RBP eCLIP22.13■■□□□ 1.13
PCDHA12-202ENST00000613593 MYH16Q9H6N6 1097 aa22.13■■□□□ 1.13
PCDHA12-202ENST00000613593 CAMSAP1Q5T5Y3 1602 aa22.12■■□□□ 1.13
PCDHA12-202ENST00000613593 RAPGEF3O95398 923 aa22.12■■□□□ 1.13
PCDHA12-202ENST00000613593 TRAK2O60296 914 aa22.1■■□□□ 1.13
PCDHA12-202ENST00000613593 CHMP5Q9NZZ3 219 aa22.1■■□□□ 1.13
PCDHA12-202ENST00000613593 ZC3H13Q5T200 1668 aaKnown RBP22.1■■□□□ 1.13
PCDHA12-202ENST00000613593 CFAP53Q96M91 514 aa22.1■■□□□ 1.13
PCDHA12-202ENST00000613593 EXOSC9Q06265 439 aaKnown RBP22.09■■□□□ 1.13
PCDHA12-202ENST00000613593 QRICH2Q9H0J4 1663 aa22.09■■□□□ 1.13
PCDHA12-202ENST00000613593 TRIM27P14373 513 aa22.09■■□□□ 1.13
PCDHA12-202ENST00000613593 DIP2CQ9Y2E4 1556 aa22.09■■□□□ 1.13
PCDHA12-202ENST00000613593 SMC4Q9NTJ3 1288 aa22.08■■□□□ 1.13
PCDHA12-202ENST00000613593 SIGLEC1Q9BZZ2 1709 aa22.08■■□□□ 1.13
PCDHA12-202ENST00000613593 ITPRIPQ8IWB1 547 aa22.07■■□□□ 1.12
PCDHA12-202ENST00000613593 SSH1Q8WYL5 1049 aa22.07■■□□□ 1.12
PCDHA12-202ENST00000613593 PIK3C2BO00750 1634 aa22.07■■□□□ 1.12
PCDHA12-202ENST00000613593 ZNF692Q9BU19 519 aaPredicted RBP22.06■■□□□ 1.12
PCDHA12-202ENST00000613593 HDAC1Q13547 482 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms