RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 PUS7Q96PZ0 661 aaKnown RBP8.04□□□□□ -1.12
SNX13-213ENST00000611725 CDK19Q9BWU1 502 aa8.03□□□□□ -1.12
SNX13-213ENST00000611725 POLR3AO14802 1390 aaPredicted RBP8.03□□□□□ -1.12
SNX13-213ENST00000611725 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
SNX13-213ENST00000611725 EIF5BO60841 1220 aaKnown RBP8.03□□□□□ -1.12
SNX13-213ENST00000611725 NINLQ9Y2I6 1382 aa8.03□□□□□ -1.12
SNX13-213ENST00000611725 TXNDC2Q86VQ3 553 aa8.03□□□□□ -1.12
SNX13-213ENST00000611725 HSCBQ8IWL3 235 aa8.03□□□□□ -1.12
SNX13-213ENST00000611725 SPINK5Q9NQ38 1064 aaPredicted RBP8.03□□□□□ -1.12
SNX13-213ENST00000611725 GCC2Q8IWJ2 1684 aa8.03□□□□□ -1.12
SNX13-213ENST00000611725 ARHGEF5Q12774 1597 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 ZNF518AQ6AHZ1 1483 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 FCHSD2O94868 740 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 API5Q9BZZ5 524 aaKnown RBP8.02□□□□□ -1.13
SNX13-213ENST00000611725 TMPOP42166 694 aaKnown RBP8.02□□□□□ -1.13
SNX13-213ENST00000611725 APBB1O00213 710 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 LMOD2Q6P5Q4 547 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 PDZRN3Q9UPQ7 1066 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 CCDC61Q9Y6R9 512 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 ATP10AO60312 1499 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 ATF7IPQ6VMQ6 1270 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 SBNO2Q9Y2G9 1366 aa8.02□□□□□ -1.13
SNX13-213ENST00000611725 SPRYD3Q8NCJ5 442 aa8.01□□□□□ -1.13
SNX13-213ENST00000611725 GOLGA6L22H0YM25 854 aa8.01□□□□□ -1.13
SNX13-213ENST00000611725 MVPQ14764 893 aaKnown RBP8.01□□□□□ -1.13
SNX13-213ENST00000611725 NKTRP30414 1462 aaKnown RBP8.01□□□□□ -1.13
SNX13-213ENST00000611725 PBRM1Q86U86 1689 aa8.01□□□□□ -1.13
SNX13-213ENST00000611725 STK31Q9BXU1 1019 aa8.01□□□□□ -1.13
SNX13-213ENST00000611725 AMPHP49418 695 aa8.01□□□□□ -1.13
SNX13-213ENST00000611725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.01□□□□□ -1.13
SNX13-213ENST00000611725 WAPLQ7Z5K2 1190 aa8□□□□□ -1.13
SNX13-213ENST00000611725 FYB1O15117 783 aa8□□□□□ -1.13
SNX13-213ENST00000611725 NSD2O96028 1365 aa8□□□□□ -1.13
SNX13-213ENST00000611725 SSH1Q8WYL5 1049 aa8□□□□□ -1.13
SNX13-213ENST00000611725 DMRT2Q9Y5R5 561 aa8□□□□□ -1.13
SNX13-213ENST00000611725 ZNF428Q96B54 188 aa8□□□□□ -1.13
SNX13-213ENST00000611725 LNPKQ9C0E8 428 aa8□□□□□ -1.13
SNX13-213ENST00000611725 NFKBIBQ15653 356 aa8□□□□□ -1.13
SNX13-213ENST00000611725 CASC1Q6TDU7 716 aa8□□□□□ -1.13
SNX13-213ENST00000611725 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
SNX13-213ENST00000611725 HSP90AB1P08238 724 aaKnown RBP7.99□□□□□ -1.13
SNX13-213ENST00000611725 ANKRD45Q5TZF3 282 aa7.99□□□□□ -1.13
SNX13-213ENST00000611725 ASXL1Q8IXJ9 1541 aa7.99□□□□□ -1.13
SNX13-213ENST00000611725 UHRF1BP1LA0JNW5 1464 aa7.99□□□□□ -1.13
SNX13-213ENST00000611725 PTPRTO14522 1441 aa7.99□□□□□ -1.13
SNX13-213ENST00000611725 ANKRD36BQ8N2N9 1353 aa7.99□□□□□ -1.13
SNX13-213ENST00000611725 HMMRO75330 724 aa7.99□□□□□ -1.13
SNX13-213ENST00000611725 KDM5DQ9BY66 1539 aa7.99□□□□□ -1.13
SNX13-213ENST00000611725 TRHP20396 242 aaPredicted RBP7.99□□□□□ -1.13
SNX13-213ENST00000611725 ZMYM4Q5VZL5 1548 aa7.99□□□□□ -1.13
SNX13-213ENST00000611725 GSE1Q14687 1217 aa7.98□□□□□ -1.13
SNX13-213ENST00000611725 CFAP44Q96MT7 982 aa7.98□□□□□ -1.13
SNX13-213ENST00000611725 CCDC27Q2M243 656 aa7.98□□□□□ -1.13
SNX13-213ENST00000611725 EMILIN1Q9Y6C2 1016 aa7.98□□□□□ -1.13
SNX13-213ENST00000611725 ZNF692Q9BU19 519 aaPredicted RBP7.98□□□□□ -1.13
SNX13-213ENST00000611725 PPP6R1Q9UPN7 881 aa7.98□□□□□ -1.13
SNX13-213ENST00000611725 ZNF521Q96K83 1311 aa7.98□□□□□ -1.13
SNX13-213ENST00000611725 MAGI2Q86UL8 1455 aa7.98□□□□□ -1.13
SNX13-213ENST00000611725 TWISTNBQ3B726 338 aaPredicted RBP7.98□□□□□ -1.13
SNX13-213ENST00000611725 SLC4A10Q6U841 1118 aa7.98□□□□□ -1.13
SNX13-213ENST00000611725 THUMPD2Q9BTF0 503 aaKnown RBP7.98□□□□□ -1.13
SNX13-213ENST00000611725 ABCC11Q96J66 1382 aa7.98□□□□□ -1.13
SNX13-213ENST00000611725 RTN4Q9NQC3 1192 aaKnown RBP7.98□□□□□ -1.13
SNX13-213ENST00000611725 SLC26A8Q96RN1 970 aa7.97□□□□□ -1.13
SNX13-213ENST00000611725 BLMP54132 1417 aaPredicted RBP7.97□□□□□ -1.13
SNX13-213ENST00000611725 NPATQ14207 1427 aa7.97□□□□□ -1.13
SNX13-213ENST00000611725 NUDT16Q96DE0 195 aaKnown RBP7.97□□□□□ -1.13
SNX13-213ENST00000611725 IGHDP01880 384 aa7.97□□□□□ -1.13
SNX13-213ENST00000611725 NOB1Q9ULX3 412 aaKnown RBP7.97□□□□□ -1.13
SNX13-213ENST00000611725 NME9Q86XW9 330 aa7.97□□□□□ -1.13
SNX13-213ENST00000611725 NFE2L2Q16236 605 aa7.97□□□□□ -1.13
SNX13-213ENST00000611725 SAMD9LQ8IVG5 1584 aa7.97□□□□□ -1.13
SNX13-213ENST00000611725 TRIM27P14373 513 aa7.96□□□□□ -1.13
SNX13-213ENST00000611725 LTV1Q96GA3 475 aaPredicted RBP7.96□□□□□ -1.13
SNX13-213ENST00000611725 C22orf23Q9BZE7 217 aa7.96□□□□□ -1.13
SNX13-213ENST00000611725 SULT6B1Q6IMI4 303 aa7.96□□□□□ -1.14
SNX13-213ENST00000611725 CHMP4AQ9BY43 222 aa7.96□□□□□ -1.14
SNX13-213ENST00000611725 WASLO00401 505 aaPredicted RBP7.96□□□□□ -1.14
SNX13-213ENST00000611725 PCDHB15Q9Y5E8 787 aa7.96□□□□□ -1.14
SNX13-213ENST00000611725 NLRP6P59044 892 aa7.96□□□□□ -1.14
SNX13-213ENST00000611725 FRAT2O75474 233 aaPredicted RBP7.95□□□□□ -1.14
SNX13-213ENST00000611725 RRS1Q15050 365 aaKnown RBP7.95□□□□□ -1.14
SNX13-213ENST00000611725 ATP7AQ04656 1500 aa7.95□□□□□ -1.14
SNX13-213ENST00000611725 RLBP1P12271 317 aa7.95□□□□□ -1.14
SNX13-213ENST00000611725 TMEM57Q8N5G2 664 aa7.95□□□□□ -1.14
SNX13-213ENST00000611725 FBLN1P23142 703 aa7.95□□□□□ -1.14
SNX13-213ENST00000611725 POGZQ7Z3K3 1410 aa7.94□□□□□ -1.14
SNX13-213ENST00000611725 KDM5CP41229 1560 aa7.94□□□□□ -1.14
SNX13-213ENST00000611725 IL16Q14005 1332 aa7.94□□□□□ -1.14
SNX13-213ENST00000611725 KDM2BQ8NHM5 1336 aa7.94□□□□□ -1.14
SNX13-213ENST00000611725 MAST1Q9Y2H9 1570 aa7.94□□□□□ -1.14
SNX13-213ENST00000611725 GZF1Q9H116 711 aaPredicted RBP7.94□□□□□ -1.14
SNX13-213ENST00000611725 GBP4Q96PP9 640 aa7.94□□□□□ -1.14
SNX13-213ENST00000611725 TNNQ9UQP3 1299 aa7.94□□□□□ -1.14
SNX13-213ENST00000611725 EIF2AK4Q9P2K8 1649 aaKnown RBP7.93□□□□□ -1.14
SNX13-213ENST00000611725 CHMP5Q9NZZ3 219 aa7.93□□□□□ -1.14
SNX13-213ENST00000611725 POLKQ9UBT6 870 aa7.93□□□□□ -1.14
SNX13-213ENST00000611725 C8orf34Q49A92 452 aa7.93□□□□□ -1.14
SNX13-213ENST00000611725 A0A1W2PP64 1363 aa7.93□□□□□ -1.14
SNX13-213ENST00000611725 NCLP19338 710 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms