RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 MIS18AQ9NYP9 233 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 NCOA1Q15788 1441 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 DISP3Q9P2K9 1392 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 IGHDP01880 384 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 AIMP1Q12904 312 aaKnown RBP4.67□□□□□ -1.66
RNF38-210ENST00000611646 KIF16BQ96L93 1317 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 GOLGA6L6A8MZA4 724 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 DCTN1Q14203 1278 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 TXNDC2Q86VQ3 553 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 SCAPERQ9BY12 1400 aa4.66□□□□□ -1.66
RNF38-210ENST00000611646 VPS37CA5D8V6 355 aaPredicted RBP4.66□□□□□ -1.66
RNF38-210ENST00000611646 PRPF40AO75400 957 aaKnown RBP4.66□□□□□ -1.66
RNF38-210ENST00000611646 ZNF592Q92610 1267 aa4.66□□□□□ -1.66
RNF38-210ENST00000611646 ISY1Q9ULR0 285 aaKnown RBP4.66□□□□□ -1.66
RNF38-210ENST00000611646 TROQ12816 1431 aaPredicted RBP4.66□□□□□ -1.66
RNF38-210ENST00000611646 RAPGEF3O95398 923 aa4.66□□□□□ -1.66
RNF38-210ENST00000611646 PTMSP20962 102 aa4.66□□□□□ -1.66
RNF38-210ENST00000611646 RBM10P98175 930 aaKnown RBP4.66□□□□□ -1.66
RNF38-210ENST00000611646 TNNQ9UQP3 1299 aa4.66□□□□□ -1.66
RNF38-210ENST00000611646 TMEM57Q8N5G2 664 aa4.66□□□□□ -1.66
RNF38-210ENST00000611646 CFAP44Q96MT7 982 aa4.66□□□□□ -1.66
RNF38-210ENST00000611646 TWISTNBQ3B726 338 aaPredicted RBP4.66□□□□□ -1.66
RNF38-210ENST00000611646 TOMM22Q9NS69 142 aa4.66□□□□□ -1.66
RNF38-210ENST00000611646 DIAPH3Q9NSV4 1193 aa4.66□□□□□ -1.66
RNF38-210ENST00000611646 C9orf78Q9NZ63 289 aaPredicted RBP4.66□□□□□ -1.66
RNF38-210ENST00000611646 R3HCC1Q9Y3T6 440 aaKnown RBP4.66□□□□□ -1.66
RNF38-210ENST00000611646 CDK11BP21127 795 aaKnown RBP4.65□□□□□ -1.66
RNF38-210ENST00000611646 MVPQ14764 893 aaKnown RBP4.65□□□□□ -1.66
RNF38-210ENST00000611646 GPATCH3Q96I76 525 aa4.65□□□□□ -1.66
RNF38-210ENST00000611646 EID1Q9Y6B2 187 aa4.65□□□□□ -1.66
RNF38-210ENST00000611646 CAMSAP2Q08AD1 1489 aa4.65□□□□□ -1.66
RNF38-210ENST00000611646 HECW1Q76N89 1606 aa4.65□□□□□ -1.66
RNF38-210ENST00000611646 NASPP49321 788 aaPredicted RBP4.65□□□□□ -1.66
RNF38-210ENST00000611646 GNAI1P63096 354 aa4.65□□□□□ -1.66
RNF38-210ENST00000611646 TAF7LQ5H9L4 462 aa4.65□□□□□ -1.66
RNF38-210ENST00000611646 DUSP27Q5VZP5 1158 aa4.65□□□□□ -1.66
RNF38-210ENST00000611646 API5Q9BZZ5 524 aaKnown RBP4.65□□□□□ -1.66
RNF38-210ENST00000611646 H3BQV1 296 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 SMARCA5O60264 1052 aaPredicted RBP4.65□□□□□ -1.67
RNF38-210ENST00000611646 CDC45O75419 566 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 NEK4P51957 841 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 PDE3AQ14432 1141 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 IFFO2Q5TF58 517 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 INTS3Q68E01 1043 aaKnown RBP4.65□□□□□ -1.67
RNF38-210ENST00000611646 FAM43AQ8N2R8 423 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 CDK19Q9BWU1 502 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 NSD3Q9BZ95 1437 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 ADGRF5Q8IZF2 1346 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 REC8O95072 547 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 TEFQ10587 303 aa4.65□□□□□ -1.67
RNF38-210ENST00000611646 SKOR2Q2VWA4 1001 aaPredicted RBP4.65□□□□□ -1.67
RNF38-210ENST00000611646 SLC4A2P04920 1241 aa4.64□□□□□ -1.67
RNF38-210ENST00000611646 SULT6B1Q6IMI4 303 aa4.64□□□□□ -1.67
RNF38-210ENST00000611646 ATF7IPQ6VMQ6 1270 aa4.64□□□□□ -1.67
RNF38-210ENST00000611646 RARSP54136 660 aaKnown RBP4.64□□□□□ -1.67
RNF38-210ENST00000611646 FAM69CQ0P6D2 419 aa4.64□□□□□ -1.67
RNF38-210ENST00000611646 WAPLQ7Z5K2 1190 aa4.64□□□□□ -1.67
RNF38-210ENST00000611646 SYNJ2O15056 1496 aa4.64□□□□□ -1.67
RNF38-210ENST00000611646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.64□□□□□ -1.67
RNF38-210ENST00000611646 THOC2Q8NI27 1593 aaKnown RBP4.64□□□□□ -1.67
RNF38-210ENST00000611646 IFIT2P09913 472 aaKnown RBP4.64□□□□□ -1.67
RNF38-210ENST00000611646 CHD1LQ86WJ1 897 aa4.64□□□□□ -1.67
RNF38-210ENST00000611646 SSH1Q8WYL5 1049 aa4.64□□□□□ -1.67
RNF38-210ENST00000611646 LARP6Q9BRS8 491 aaKnown RBP4.64□□□□□ -1.67
RNF38-210ENST00000611646 NRDCO43847 1150 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 C1orf141Q5JVX7 400 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 FAM184AQ8NB25 1140 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 DDX54Q8TDD1 881 aaKnown RBP4.63□□□□□ -1.67
RNF38-210ENST00000611646 RPRD2Q5VT52 1461 aaKnown RBP4.63□□□□□ -1.67
RNF38-210ENST00000611646 DNMBPQ6XZF7 1577 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 ABCA10Q8WWZ4 1543 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 MRE11P49959 708 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 CEBPZQ03701 1054 aaKnown RBP4.63□□□□□ -1.67
RNF38-210ENST00000611646 SF3A1Q15459 793 aaKnown RBP4.63□□□□□ -1.67
RNF38-210ENST00000611646 MCM10Q7L590 875 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 HMGXB3Q12766 1538 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 SURF6O75683 361 aaKnown RBP4.63□□□□□ -1.67
RNF38-210ENST00000611646 NLRP6P59044 892 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 IL1RAPL2Q9NP60 686 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 PHF14O94880 888 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 TMPOP42166 694 aaKnown RBP4.63□□□□□ -1.67
RNF38-210ENST00000611646 TSHZ3Q63HK5 1081 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 BICD2Q8TD16 824 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 TBC1D2Q9BYX2 928 aa4.63□□□□□ -1.67
RNF38-210ENST00000611646 FIBPO43427 364 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 MCM4P33991 863 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 STK3Q13188 491 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 SPC24Q8NBT2 197 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 SIL1Q9H173 461 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 GRPEL1Q9HAV7 217 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 SMC3Q9UQE7 1217 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 ROCK1Q13464 1354 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 MAP3K1Q13233 1512 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 SEC24BO95487 1268 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 UBTFL1P0CB47 393 aaPredicted RBP4.62□□□□□ -1.67
RNF38-210ENST00000611646 CCAR2Q8N163 923 aaKnown RBP4.62□□□□□ -1.67
RNF38-210ENST00000611646 RBM33Q96EV2 1170 aaKnown RBP4.62□□□□□ -1.67
RNF38-210ENST00000611646 EXOC6BQ9Y2D4 811 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 PSME1Q06323 249 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 PDE4CQ08493 712 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms