RNA–Protein interactions for RNA: ENST00000611343.1

AC012409.3-201, humanhuman

BASIC

Gene AC012409.3, Length 981 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.3-201ENST00000611343 SMPD1P17405 629 aa10.12□□□□□ -0.79
AC012409.3-201ENST00000611343 TTC24A2A3L6 582 aaPredicted RBP10.11□□□□□ -0.79
AC012409.3-201ENST00000611343 WNT7AO00755 349 aa10.09□□□□□ -0.79
AC012409.3-201ENST00000611343 SNRPBP14678 240 aaKnown RBP10.09□□□□□ -0.79
AC012409.3-201ENST00000611343 MSS51Q4VC12 460 aa10.09□□□□□ -0.79
AC012409.3-201ENST00000611343 WIPF1O43516 503 aa10.08□□□□□ -0.8
AC012409.3-201ENST00000611343 J3QL48 77 aa10.07□□□□□ -0.8
AC012409.3-201ENST00000611343 ZBTB24O43167 697 aaPredicted RBP10.07□□□□□ -0.8
AC012409.3-201ENST00000611343 TRIM32Q13049 653 aa10.07□□□□□ -0.8
AC012409.3-201ENST00000611343 ATP13A2Q9NQ11 1180 aa10.07□□□□□ -0.8
AC012409.3-201ENST00000611343 SULF1Q8IWU6 871 aa10.06□□□□□ -0.8
AC012409.3-201ENST00000611343 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
AC012409.3-201ENST00000611343 MRGPRX2Q96LB1 330 aa10.06□□□□□ -0.8
AC012409.3-201ENST00000611343 CCDC180Q9P1Z9 1646 aa10.05□□□□□ -0.8
AC012409.3-201ENST00000611343 MMP16P51512 607 aa10.05□□□□□ -0.8
AC012409.3-201ENST00000611343 HPS1Q92902 700 aa10.03□□□□□ -0.8
AC012409.3-201ENST00000611343 STK17AQ9UEE5 414 aa10.03□□□□□ -0.8
AC012409.3-201ENST00000611343 TRIM47Q96LD4 638 aa10.02□□□□□ -0.81
AC012409.3-201ENST00000611343 TERTO14746 1132 aaKnown RBP10.01□□□□□ -0.81
AC012409.3-201ENST00000611343 DXOO77932 396 aaKnown RBP9.99□□□□□ -0.81
AC012409.3-201ENST00000611343 CD46P15529 392 aa9.99□□□□□ -0.81
AC012409.3-201ENST00000611343 SKOR1P84550 965 aa9.99□□□□□ -0.81
AC012409.3-201ENST00000611343 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
AC012409.3-201ENST00000611343 HLA-CQ95604 372 aa9.99□□□□□ -0.81
AC012409.3-201ENST00000611343 INSM1Q01101 510 aaPredicted RBP9.98□□□□□ -0.81
AC012409.3-201ENST00000611343 Q3C1V9 767 aa9.98□□□□□ -0.81
AC012409.3-201ENST00000611343 GRIPAP1Q4V328 841 aa9.98□□□□□ -0.81
AC012409.3-201ENST00000611343 USB1Q9BQ65 265 aaKnown RBP9.98□□□□□ -0.81
AC012409.3-201ENST00000611343 RC3H1Q5TC82 1133 aaKnown RBP9.96□□□□□ -0.82
AC012409.3-201ENST00000611343 SENP2Q9HC62 589 aa9.96□□□□□ -0.82
AC012409.3-201ENST00000611343 KDM4AO75164 1064 aa9.93□□□□□ -0.82
AC012409.3-201ENST00000611343 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
AC012409.3-201ENST00000611343 REPIN1Q9BWE0 567 aaKnown RBP9.93□□□□□ -0.82
AC012409.3-201ENST00000611343 GPIHBP1Q8IV16 184 aa9.91□□□□□ -0.82
AC012409.3-201ENST00000611343 WNT7BP56706 349 aa9.9□□□□□ -0.82
AC012409.3-201ENST00000611343 KIFC2Q96AC6 838 aa9.9□□□□□ -0.82
AC012409.3-201ENST00000611343 ALDH1A1P00352 501 aa9.89□□□□□ -0.83
AC012409.3-201ENST00000611343 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
AC012409.3-201ENST00000611343 GUCA2AQ02747 115 aa9.89□□□□□ -0.83
AC012409.3-201ENST00000611343 SYMPKQ92797 1274 aaKnown RBP9.89□□□□□ -0.83
AC012409.3-201ENST00000611343 SIAH2O43255 324 aa9.88□□□□□ -0.83
AC012409.3-201ENST00000611343 PTCRAQ6ISU1 281 aaPredicted RBP9.88□□□□□ -0.83
AC012409.3-201ENST00000611343 HOXA2O43364 376 aa9.87□□□□□ -0.83
AC012409.3-201ENST00000611343 BMP1P13497 986 aa9.87□□□□□ -0.83
AC012409.3-201ENST00000611343 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
AC012409.3-201ENST00000611343 TRIM46Q7Z4K8 759 aa9.87□□□□□ -0.83
AC012409.3-201ENST00000611343 USP46P62068 366 aa9.85□□□□□ -0.83
AC012409.3-201ENST00000611343 NXF1Q9UBU9 619 aaKnown RBP9.85□□□□□ -0.83
AC012409.3-201ENST00000611343 ABCC9O60706 1549 aa9.85□□□□□ -0.83
AC012409.3-201ENST00000611343 IRF6O14896 467 aa9.84□□□□□ -0.83
AC012409.3-201ENST00000611343 JUNDP17535 347 aa9.84□□□□□ -0.83
AC012409.3-201ENST00000611343 GMPRP36959 345 aa9.84□□□□□ -0.83
AC012409.3-201ENST00000611343 MAP2K5Q13163 448 aa9.84□□□□□ -0.83
AC012409.3-201ENST00000611343 VEGFBP49765 207 aa9.82□□□□□ -0.84
AC012409.3-201ENST00000611343 NUDT12Q9BQG2 462 aa9.81□□□□□ -0.84
AC012409.3-201ENST00000611343 CAPN5O15484 640 aaPredicted RBP9.8□□□□□ -0.84
AC012409.3-201ENST00000611343 EHBP1Q8NDI1 1231 aa9.8□□□□□ -0.84
AC012409.3-201ENST00000611343 SLC16A10Q8TF71 515 aa9.8□□□□□ -0.84
AC012409.3-201ENST00000611343 SH3BP2P78314 561 aa9.79□□□□□ -0.84
AC012409.3-201ENST00000611343 ERBB4Q15303 1308 aa9.79□□□□□ -0.84
AC012409.3-201ENST00000611343 PCDHGC3Q9UN70 934 aa9.78□□□□□ -0.84
AC012409.3-201ENST00000611343 H3BM21 787 aa9.77□□□□□ -0.85
AC012409.3-201ENST00000611343 RETREG3Q86VR2 466 aa9.77□□□□□ -0.85
AC012409.3-201ENST00000611343 ZSCAN1Q8NBB4 408 aa9.77□□□□□ -0.85
AC012409.3-201ENST00000611343 FAM217BQ9NTX9 383 aaPredicted RBP9.77□□□□□ -0.85
AC012409.3-201ENST00000611343 NPAS3Q8IXF0 933 aa9.76□□□□□ -0.85
AC012409.3-201ENST00000611343 IRF7Q92985 503 aa9.76□□□□□ -0.85
AC012409.3-201ENST00000611343 WASF2Q9Y6W5 498 aa9.76□□□□□ -0.85
AC012409.3-201ENST00000611343 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
AC012409.3-201ENST00000611343 ZFP42Q96MM3 310 aa9.75□□□□□ -0.85
AC012409.3-201ENST00000611343 MINK1Q8N4C8 1332 aaPredicted RBP9.75□□□□□ -0.85
AC012409.3-201ENST00000611343 PLCB2Q00722 1185 aa9.74□□□□□ -0.85
AC012409.3-201ENST00000611343 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
AC012409.3-201ENST00000611343 TLL2Q9Y6L7 1015 aa9.73□□□□□ -0.85
AC012409.3-201ENST00000611343 FAM181BA6NEQ2 426 aa9.72□□□□□ -0.85
AC012409.3-201ENST00000611343 FDX1P10109 184 aa9.72□□□□□ -0.85
AC012409.3-201ENST00000611343 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
AC012409.3-201ENST00000611343 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
AC012409.3-201ENST00000611343 BAP1Q92560 729 aa9.71□□□□□ -0.86
AC012409.3-201ENST00000611343 C6orf229H3BNL8 230 aa9.7□□□□□ -0.86
AC012409.3-201ENST00000611343 MS4A1P11836 297 aa9.7□□□□□ -0.86
AC012409.3-201ENST00000611343 CLCN1P35523 988 aa9.7□□□□□ -0.86
AC012409.3-201ENST00000611343 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
AC012409.3-201ENST00000611343 UNC93B1Q9H1C4 597 aa9.7□□□□□ -0.86
AC012409.3-201ENST00000611343 EVA1BQ9NVM1 165 aa9.7□□□□□ -0.86
AC012409.3-201ENST00000611343 LOC100996750A0A140TA64 210 aa9.69□□□□□ -0.86
AC012409.3-201ENST00000611343 KRTAP4-6Q9BYQ5 205 aa9.69□□□□□ -0.86
AC012409.3-201ENST00000611343 KDM2AQ9Y2K7 1162 aa9.69□□□□□ -0.86
AC012409.3-201ENST00000611343 SOBPA7XYQ1 873 aa9.68□□□□□ -0.86
AC012409.3-201ENST00000611343 NDUFV2P19404 249 aa9.67□□□□□ -0.86
AC012409.3-201ENST00000611343 NNTQ13423 1086 aa9.67□□□□□ -0.86
AC012409.3-201ENST00000611343 PTPRNQ16849 979 aa9.67□□□□□ -0.86
AC012409.3-201ENST00000611343 MRPL14Q6P1L8 145 aaKnown RBP9.66□□□□□ -0.86
AC012409.3-201ENST00000611343 SPIRE2Q8WWL2 714 aa9.66□□□□□ -0.86
AC012409.3-201ENST00000611343 KLF16Q9BXK1 252 aaPredicted RBP9.66□□□□□ -0.86
AC012409.3-201ENST00000611343 TIMP2P16035 220 aa9.65□□□□□ -0.86
AC012409.3-201ENST00000611343 KCNH2Q12809 1159 aa9.65□□□□□ -0.86
AC012409.3-201ENST00000611343 MPNDQ8N594 471 aa9.65□□□□□ -0.86
AC012409.3-201ENST00000611343 ZNF511Q8NB15 262 aa9.65□□□□□ -0.86
AC012409.3-201ENST00000611343 PURBQ96QR8 312 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms