RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 RRP9O43818 475 aaKnown RBP15.41■□□□□ 0.06
TP53-220ENST00000610623 RGL3Q3MIN7 710 aa15.4■□□□□ 0.06
TP53-220ENST00000610623 EFCAB6Q5THR3 1501 aa15.4■□□□□ 0.06
TP53-220ENST00000610623 MADDQ8WXG6 1647 aa15.4■□□□□ 0.06
TP53-220ENST00000610623 POGKQ9P215 609 aa15.39■□□□□ 0.05
TP53-220ENST00000610623 ZMYND15Q9H091 742 aa15.39■□□□□ 0.05
TP53-220ENST00000610623 KIF3BO15066 747 aa15.38■□□□□ 0.05
TP53-220ENST00000610623 ST20-MTHFSA0A0A6YYL1 179 aa15.38■□□□□ 0.05
TP53-220ENST00000610623 CLCN1P35523 988 aa15.38■□□□□ 0.05
TP53-220ENST00000610623 PLCD3Q8N3E9 789 aa15.38■□□□□ 0.05
TP53-220ENST00000610623 BECN1Q14457 450 aa15.37■□□□□ 0.05
TP53-220ENST00000610623 HSP90AA2PQ14568 343 aaPredicted RBP15.37■□□□□ 0.05
TP53-220ENST00000610623 KIAA1210Q9ULL0 1709 aa15.37■□□□□ 0.05
TP53-220ENST00000610623 C20orf194Q5TEA3 1177 aa15.37■□□□□ 0.05
TP53-220ENST00000610623 PNNQ9H307 717 aaKnown RBP15.37■□□□□ 0.05
TP53-220ENST00000610623 MAP3K4Q9Y6R4 1608 aa15.36■□□□□ 0.05
TP53-220ENST00000610623 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.36■□□□□ 0.05
TP53-220ENST00000610623 KIF1BO60333 1816 aa15.36■□□□□ 0.05
TP53-220ENST00000610623 HSP90AA1P07900 732 aaKnown RBP15.35■□□□□ 0.05
TP53-220ENST00000610623 PPRC1Q5VV67 1664 aaKnown RBP15.35■□□□□ 0.05
TP53-220ENST00000610623 GLI2P10070 1586 aa15.35■□□□□ 0.05
TP53-220ENST00000610623 IQGAP1P46940 1657 aa15.35■□□□□ 0.05
TP53-220ENST00000610623 VIRMAQ69YN4 1812 aaKnown RBP15.35■□□□□ 0.05
TP53-220ENST00000610623 FRMPD1Q5SYB0 1578 aa15.34■□□□□ 0.05
TP53-220ENST00000610623 COL17A1Q9UMD9 1497 aaPredicted RBP15.34■□□□□ 0.05
TP53-220ENST00000610623 ABCA6Q8N139 1617 aa15.34■□□□□ 0.05
TP53-220ENST00000610623 NAP1L5Q96NT1 182 aaPredicted RBP15.34■□□□□ 0.05
TP53-220ENST00000610623 NBPF1Q3BBV0 1214 aa15.32■□□□□ 0.04
TP53-220ENST00000610623 IFT172Q9UG01 1749 aa15.32■□□□□ 0.04
TP53-220ENST00000610623 PER1O15534 1290 aaPredicted RBP15.32■□□□□ 0.04
TP53-220ENST00000610623 USP19O94966 1318 aa15.31■□□□□ 0.04
TP53-220ENST00000610623 RICTORQ6R327 1708 aa15.31■□□□□ 0.04
TP53-220ENST00000610623 RGS3P49796 1198 aa15.31■□□□□ 0.04
TP53-220ENST00000610623 MYOM2P54296 1465 aa15.31■□□□□ 0.04
TP53-220ENST00000610623 CIZ1Q9ULV3 898 aaPredicted RBP15.31■□□□□ 0.04
TP53-220ENST00000610623 FSD2A1L4K1 749 aa15.3■□□□□ 0.04
TP53-220ENST00000610623 GOLGA6L3A6NEY3 463 aa15.3■□□□□ 0.04
TP53-220ENST00000610623 XRCC6P12956 609 aaKnown RBP eCLIP15.29■□□□□ 0.04
TP53-220ENST00000610623 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
TP53-220ENST00000610623 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
TP53-220ENST00000610623 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
TP53-220ENST00000610623 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
TP53-220ENST00000610623 PODXL2Q9NZ53 605 aa15.29■□□□□ 0.04
TP53-220ENST00000610623 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
TP53-220ENST00000610623 ANTXR1Q9H6X2 564 aa15.28■□□□□ 0.04
TP53-220ENST00000610623 DUSP27Q5VZP5 1158 aa15.28■□□□□ 0.04
TP53-220ENST00000610623 ZC3H13Q5T200 1668 aaKnown RBP15.27■□□□□ 0.03
TP53-220ENST00000610623 MROH2AA6NES4 1674 aa15.27■□□□□ 0.03
TP53-220ENST00000610623 SCAF11Q99590 1463 aaKnown RBP15.26■□□□□ 0.03
TP53-220ENST00000610623 CAMSAP1Q5T5Y3 1602 aa15.26■□□□□ 0.03
TP53-220ENST00000610623 TESK2Q96S53 571 aa15.26■□□□□ 0.03
TP53-220ENST00000610623 ABCC3O15438 1527 aa15.26■□□□□ 0.03
TP53-220ENST00000610623 ADGRB3O60242 1522 aa15.26■□□□□ 0.03
TP53-220ENST00000610623 CAPN15O75808 1086 aa15.26■□□□□ 0.03
TP53-220ENST00000610623 TMF1P82094 1093 aa15.26■□□□□ 0.03
TP53-220ENST00000610623 MAPK8IP3Q9UPT6 1336 aa15.26■□□□□ 0.03
TP53-220ENST00000610623 UGGT1Q9NYU2 1555 aa15.24■□□□□ 0.03
TP53-220ENST00000610623 SLKQ9H2G2 1235 aaPredicted RBP15.24■□□□□ 0.03
TP53-220ENST00000610623 DISP3Q9P2K9 1392 aa15.23■□□□□ 0.03
TP53-220ENST00000610623 GOLGA2Q08379 1002 aa15.23■□□□□ 0.03
TP53-220ENST00000610623 ZNF521Q96K83 1311 aa15.23■□□□□ 0.03
TP53-220ENST00000610623 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
TP53-220ENST00000610623 NRXN1Q9ULB1 1477 aa15.23■□□□□ 0.03
TP53-220ENST00000610623 MRE11P49959 708 aa15.22■□□□□ 0.03
TP53-220ENST00000610623 ISY1Q9ULR0 285 aaKnown RBP15.22■□□□□ 0.03
TP53-220ENST00000610623 DIP2BQ9P265 1576 aa15.22■□□□□ 0.03
TP53-220ENST00000610623 NPATQ14207 1427 aa15.22■□□□□ 0.03
TP53-220ENST00000610623 ABCB7O75027 752 aa15.21■□□□□ 0.03
TP53-220ENST00000610623 NLRP1Q9C000 1473 aa15.21■□□□□ 0.03
TP53-220ENST00000610623 PPLO60437 1756 aa15.21■□□□□ 0.03
TP53-220ENST00000610623 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.02
TP53-220ENST00000610623 ZMYM3Q14202 1370 aa15.2■□□□□ 0.02
TP53-220ENST00000610623 CDCA8Q53HL2 280 aa15.2■□□□□ 0.02
TP53-220ENST00000610623 CC2D1BQ5T0F9 858 aaKnown RBP15.2■□□□□ 0.02
TP53-220ENST00000610623 UPF2Q9HAU5 1272 aaKnown RBP15.2■□□□□ 0.02
TP53-220ENST00000610623 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
TP53-220ENST00000610623 SYNMO15061 1565 aa15.2■□□□□ 0.02
TP53-220ENST00000610623 MCM4P33991 863 aa15.2■□□□□ 0.02
TP53-220ENST00000610623 CYB5RLQ6IPT4 315 aa15.2■□□□□ 0.02
TP53-220ENST00000610623 SETBP1Q9Y6X0 1596 aa15.2■□□□□ 0.02
TP53-220ENST00000610623 HS6ST3Q8IZP7 471 aa15.19■□□□□ 0.02
TP53-220ENST00000610623 PIK3C2BO00750 1634 aa15.19■□□□□ 0.02
TP53-220ENST00000610623 CENPJQ9HC77 1338 aaPredicted RBP15.19■□□□□ 0.02
TP53-220ENST00000610623 ARHGAP31Q2M1Z3 1444 aa15.19■□□□□ 0.02
TP53-220ENST00000610623 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
TP53-220ENST00000610623 SEC24BO95487 1268 aa15.18■□□□□ 0.02
TP53-220ENST00000610623 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
TP53-220ENST00000610623 PANK2Q9BZ23 570 aa15.18■□□□□ 0.02
TP53-220ENST00000610623 MYO3AQ8NEV4 1616 aa15.18■□□□□ 0.02
TP53-220ENST00000610623 TPM2P07951 284 aa15.18■□□□□ 0.02
TP53-220ENST00000610623 SLFN5Q08AF3 891 aa15.18■□□□□ 0.02
TP53-220ENST00000610623 GGT6Q6P531 493 aa15.18■□□□□ 0.02
TP53-220ENST00000610623 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
TP53-220ENST00000610623 NOS1P29475 1434 aa15.18■□□□□ 0.02
TP53-220ENST00000610623 ESPNB1AK53 854 aa15.17■□□□□ 0.02
TP53-220ENST00000610623 RNF25Q96BH1 459 aaPredicted RBP15.17■□□□□ 0.02
TP53-220ENST00000610623 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
TP53-220ENST00000610623 KDM5AP29375 1690 aaKnown RBP15.17■□□□□ 0.02
TP53-220ENST00000610623 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
TP53-220ENST00000610623 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms