RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CARD14Q9BXL6 1004 aa8.57□□□□□ -1.04
SYNPO2-206ENST00000610556 GCC2Q8IWJ2 1684 aa8.57□□□□□ -1.04
SYNPO2-206ENST00000610556 PRKAR2BP31323 418 aa8.57□□□□□ -1.04
SYNPO2-206ENST00000610556 WDR63Q8IWG1 891 aa8.57□□□□□ -1.04
SYNPO2-206ENST00000610556 PRAM1Q96QH2 718 aa8.57□□□□□ -1.04
SYNPO2-206ENST00000610556 PCDHB15Q9Y5E8 787 aa8.57□□□□□ -1.04
SYNPO2-206ENST00000610556 RAPGEF3O95398 923 aa8.56□□□□□ -1.04
SYNPO2-206ENST00000610556 SEC24BO95487 1268 aa8.56□□□□□ -1.04
SYNPO2-206ENST00000610556 RTF1Q92541 710 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-206ENST00000610556 THUMPD2Q9BTF0 503 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-206ENST00000610556 ABCA8O94911 1581 aa8.56□□□□□ -1.04
SYNPO2-206ENST00000610556 FOXD4L6Q3SYB3 417 aaPredicted RBP8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 FOXD4L3Q6VB84 417 aaPredicted RBP8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 ATF7IPQ6VMQ6 1270 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 SSH1Q8WYL5 1049 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 SYCP2Q9BX26 1530 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 DDX11L8A8MPP1 907 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 TRAK2O60296 914 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 RLBP1P12271 317 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 ADCY10Q96PN6 1610 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 A2MP01023 1474 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 SCAF11Q99590 1463 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 TMEM57Q8N5G2 664 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 CABP1Q9NZU7 370 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 DDX49Q9Y6V7 483 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 KIF16BQ96L93 1317 aa8.55□□□□□ -1.04
SYNPO2-206ENST00000610556 TMPOP42166 694 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-206ENST00000610556 FBLN1P23142 703 aa8.54□□□□□ -1.04
SYNPO2-206ENST00000610556 DNTTIP2Q5QJE6 756 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-206ENST00000610556 LMOD2Q6P5Q4 547 aa8.54□□□□□ -1.04
SYNPO2-206ENST00000610556 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
SYNPO2-206ENST00000610556 ADGRL2O95490 1459 aa8.54□□□□□ -1.04
SYNPO2-206ENST00000610556 ARHGEF12Q9NZN5 1544 aa8.54□□□□□ -1.04
SYNPO2-206ENST00000610556 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 OS9Q13438 667 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 AAMPQ13685 434 aa8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 NECTIN2Q92692 538 aa8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 COG3Q96JB2 828 aa8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 MSNP26038 577 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 COL17A1Q9UMD9 1497 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 TRAPPC8Q9Y2L5 1435 aa8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 LTV1Q96GA3 475 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 ARID3AQ99856 593 aa8.53□□□□□ -1.04
SYNPO2-206ENST00000610556 KDM2BQ8NHM5 1336 aa8.52□□□□□ -1.04
SYNPO2-206ENST00000610556 ITSN2Q9NZM3 1697 aa8.52□□□□□ -1.04
SYNPO2-206ENST00000610556 TRIM27P14373 513 aa8.52□□□□□ -1.05
SYNPO2-206ENST00000610556 MCM4P33991 863 aa8.52□□□□□ -1.05
SYNPO2-206ENST00000610556 HAP1P54257 671 aaPredicted RBP8.52□□□□□ -1.05
SYNPO2-206ENST00000610556 LMOD3Q0VAK6 560 aa8.52□□□□□ -1.05
SYNPO2-206ENST00000610556 CYB5RLQ6IPT4 315 aa8.51□□□□□ -1.05
SYNPO2-206ENST00000610556 CDK19Q9BWU1 502 aa8.51□□□□□ -1.05
SYNPO2-206ENST00000610556 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
SYNPO2-206ENST00000610556 NOS1P29475 1434 aa8.51□□□□□ -1.05
SYNPO2-206ENST00000610556 STK31Q9BXU1 1019 aa8.51□□□□□ -1.05
SYNPO2-206ENST00000610556 GNAI1P63096 354 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 RILPL2Q969X0 211 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 KCNJ4P48050 445 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 API5Q9BZZ5 524 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 GPRASP1Q5JY77 1395 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 SHANK2Q9UPX8 1470 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 ASXL1Q8IXJ9 1541 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 MCCP23508 829 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 TWISTNBQ3B726 338 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 CHD1LQ86WJ1 897 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 NINLQ9Y2I6 1382 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 KDM5CP41229 1560 aa8.5□□□□□ -1.05
SYNPO2-206ENST00000610556 ST18O60284 1047 aa8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 HMMRO75330 724 aa8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 BCORL1Q5H9F3 1711 aa8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 AMPHP49418 695 aa8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 DCTN1Q14203 1278 aa8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 RRS1Q15050 365 aaKnown RBP8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 HDGFP51858 240 aaKnown RBP8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 MCTP1Q6DN14 999 aa8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 NGDNQ8NEJ9 315 aaKnown RBP8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 TBC1D32Q96NH3 1257 aa8.49□□□□□ -1.05
SYNPO2-206ENST00000610556 IDI1Q13907 227 aa8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 C14orf93Q9H972 538 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 TXNDC2Q86VQ3 553 aa8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 TAOK2Q9UL54 1235 aa8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 MBD5Q9P267 1494 aa8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 CFAP44Q96MT7 982 aa8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 BLMP54132 1417 aaPredicted RBP8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 PLCH2O75038 1416 aa8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 MRE11P49959 708 aa8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 OSCARQ8IYS5 282 aa8.48□□□□□ -1.05
SYNPO2-206ENST00000610556 MAGI2Q86UL8 1455 aa8.47□□□□□ -1.05
SYNPO2-206ENST00000610556 CDC45O75419 566 aa8.47□□□□□ -1.05
SYNPO2-206ENST00000610556 PTMSP20962 102 aa8.47□□□□□ -1.05
SYNPO2-206ENST00000610556 FAM43AQ8N2R8 423 aa8.47□□□□□ -1.05
SYNPO2-206ENST00000610556 SKOR2Q2VWA4 1001 aaPredicted RBP8.47□□□□□ -1.05
SYNPO2-206ENST00000610556 CT47B1P0C2W7 299 aaPredicted RBP8.46□□□□□ -1.05
SYNPO2-206ENST00000610556 SULT6B1Q6IMI4 303 aa8.46□□□□□ -1.05
SYNPO2-206ENST00000610556 PIK3C2GO75747 1445 aa8.46□□□□□ -1.06
SYNPO2-206ENST00000610556 ADGRL1O94910 1474 aa8.46□□□□□ -1.06
SYNPO2-206ENST00000610556 FBXO31Q5XUX0 539 aaPredicted RBP8.46□□□□□ -1.06
SYNPO2-206ENST00000610556 KIAA1211Q6ZU35 1233 aa8.46□□□□□ -1.06
SYNPO2-206ENST00000610556 ANO2Q9NQ90 1003 aa8.46□□□□□ -1.06
SYNPO2-206ENST00000610556 EMILIN1Q9Y6C2 1016 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms