RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 DZIP1LQ8IYY4 767 aaKnown RBP25.92■■□□□ 1.74
SSBP3-216ENST00000610401 LNPKQ9C0E8 428 aa25.91■■□□□ 1.74
SSBP3-216ENST00000610401 TBC1D32Q96NH3 1257 aa25.91■■□□□ 1.74
SSBP3-216ENST00000610401 MADDQ8WXG6 1647 aa25.91■■□□□ 1.74
SSBP3-216ENST00000610401 NOS1P29475 1434 aa25.9■■□□□ 1.74
SSBP3-216ENST00000610401 ZKSCAN2Q63HK3 967 aa25.9■■□□□ 1.74
SSBP3-216ENST00000610401 C1orf115Q9H7X2 142 aa25.9■■□□□ 1.74
SSBP3-216ENST00000610401 C22orf23Q9BZE7 217 aa25.89■■□□□ 1.74
SSBP3-216ENST00000610401 RRAGDQ9NQL2 400 aaPredicted RBP25.89■■□□□ 1.73
SSBP3-216ENST00000610401 MVPQ14764 893 aaKnown RBP25.88■■□□□ 1.73
SSBP3-216ENST00000610401 SSH1Q8WYL5 1049 aa25.88■■□□□ 1.73
SSBP3-216ENST00000610401 NOB1Q9ULX3 412 aaKnown RBP25.88■■□□□ 1.73
SSBP3-216ENST00000610401 TRIM27P14373 513 aa25.87■■□□□ 1.73
SSBP3-216ENST00000610401 MYH16Q9H6N6 1097 aa25.87■■□□□ 1.73
SSBP3-216ENST00000610401 CLTCL1P53675 1640 aa25.87■■□□□ 1.73
SSBP3-216ENST00000610401 SYNMO15061 1565 aa25.85■■□□□ 1.73
SSBP3-216ENST00000610401 THUMPD2Q9BTF0 503 aaKnown RBP25.85■■□□□ 1.73
SSBP3-216ENST00000610401 ANTXR1Q9H6X2 564 aa25.85■■□□□ 1.73
SSBP3-216ENST00000610401 MINK1Q8N4C8 1332 aaPredicted RBP25.84■■□□□ 1.73
SSBP3-216ENST00000610401 TMEM57Q8N5G2 664 aa25.83■■□□□ 1.73
SSBP3-216ENST00000610401 HSP90AA1P07900 732 aaKnown RBP25.81■■□□□ 1.72
SSBP3-216ENST00000610401 RIPK4P57078 832 aa25.81■■□□□ 1.72
SSBP3-216ENST00000610401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.81■■□□□ 1.72
SSBP3-216ENST00000610401 POLR3AO14802 1390 aaPredicted RBP25.81■■□□□ 1.72
SSBP3-216ENST00000610401 GOLGA6L3A6NEY3 463 aa25.8■■□□□ 1.72
SSBP3-216ENST00000610401 XRCC6P12956 609 aaKnown RBP eCLIP25.8■■□□□ 1.721e-7■□□□□ 8.9
SSBP3-216ENST00000610401 LAMC1P11047 1609 aa25.8■■□□□ 1.72
SSBP3-216ENST00000610401 WDR63Q8IWG1 891 aa25.79■■□□□ 1.72
SSBP3-216ENST00000610401 MCM4P33991 863 aa25.79■■□□□ 1.72
SSBP3-216ENST00000610401 RNF17Q9BXT8 1623 aaKnown RBP25.78■■□□□ 1.72
SSBP3-216ENST00000610401 NPC1L1Q9UHC9 1359 aa25.78■■□□□ 1.72
SSBP3-216ENST00000610401 ABCC2Q92887 1545 aa25.78■■□□□ 1.72
SSBP3-216ENST00000610401 HMOX1P09601 288 aa25.77■■□□□ 1.72
SSBP3-216ENST00000610401 NAP1L5Q96NT1 182 aaPredicted RBP25.77■■□□□ 1.72
SSBP3-216ENST00000610401 PTPRTO14522 1441 aa25.77■■□□□ 1.72
SSBP3-216ENST00000610401 IQGAP1P46940 1657 aa25.77■■□□□ 1.72
SSBP3-216ENST00000610401 TRAK2O60296 914 aa25.77■■□□□ 1.72
SSBP3-216ENST00000610401 PLXNC1O60486 1568 aa25.76■■□□□ 1.71
SSBP3-216ENST00000610401 APBB1O00213 710 aa25.76■■□□□ 1.71
SSBP3-216ENST00000610401 TMPOP42166 694 aaKnown RBP25.76■■□□□ 1.71
SSBP3-216ENST00000610401 HSCBQ8IWL3 235 aa25.76■■□□□ 1.71
SSBP3-216ENST00000610401 MYOM1P52179 1685 aa25.75■■□□□ 1.71
SSBP3-216ENST00000610401 KDM5AP29375 1690 aaKnown RBP25.75■■□□□ 1.71
SSBP3-216ENST00000610401 FAM43AQ8N2R8 423 aa25.75■■□□□ 1.71
SSBP3-216ENST00000610401 TRPM2O94759 1503 aa25.74■■□□□ 1.71
SSBP3-216ENST00000610401 ANKRD45Q5TZF3 282 aa25.74■■□□□ 1.71
SSBP3-216ENST00000610401 ATF7IPQ6VMQ6 1270 aa25.73■■□□□ 1.71
SSBP3-216ENST00000610401 RBM42Q9BTD8 480 aaKnown RBP25.73■■□□□ 1.71
SSBP3-216ENST00000610401 HSP90AB1P08238 724 aaKnown RBP25.72■■□□□ 1.71
SSBP3-216ENST00000610401 STAC3Q96MF2 364 aa25.71■■□□□ 1.71
SSBP3-216ENST00000610401 FANCAO15360 1455 aa25.71■■□□□ 1.71
SSBP3-216ENST00000610401 NLRP1Q9C000 1473 aa25.71■■□□□ 1.71
SSBP3-216ENST00000610401 TRIM35Q9UPQ4 493 aa25.71■■□□□ 1.71
SSBP3-216ENST00000610401 ABCC1P33527 1531 aa25.71■■□□□ 1.71
SSBP3-216ENST00000610401 C14orf93Q9H972 538 aaKnown RBP25.7■■□□□ 1.71
SSBP3-216ENST00000610401 EVC2Q86UK5 1308 aa25.7■■□□□ 1.7
SSBP3-216ENST00000610401 L1TD1Q5T7N2 865 aaKnown RBP25.7■■□□□ 1.7
SSBP3-216ENST00000610401 RAPGEF3O95398 923 aa25.69■■□□□ 1.7
SSBP3-216ENST00000610401 CHD1O14646 1710 aa25.69■■□□□ 1.7
SSBP3-216ENST00000610401 NGEFQ8N5V2 710 aa25.69■■□□□ 1.7
SSBP3-216ENST00000610401 CHMP5Q9NZZ3 219 aa25.68■■□□□ 1.7
SSBP3-216ENST00000610401 SLC24A1O60721 1099 aa25.68■■□□□ 1.7
SSBP3-216ENST00000610401 DDX19BQ9UMR2 479 aa25.68■■□□□ 1.7
SSBP3-216ENST00000610401 CLASP1Q7Z460 1538 aa25.66■■□□□ 1.7
SSBP3-216ENST00000610401 ADGRL1O94910 1474 aa25.66■■□□□ 1.7
SSBP3-216ENST00000610401 SPHKAPQ2M3C7 1700 aa25.65■■□□□ 1.7
SSBP3-216ENST00000610401 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
SSBP3-216ENST00000610401 ABCA6Q8N139 1617 aa25.65■■□□□ 1.7
SSBP3-216ENST00000610401 NINLQ9Y2I6 1382 aa25.64■■□□□ 1.7
SSBP3-216ENST00000610401 CD2BP2O95400 341 aaKnown RBP25.64■■□□□ 1.7
SSBP3-216ENST00000610401 CEP152O94986 1710 aa25.64■■□□□ 1.69
SSBP3-216ENST00000610401 PRAM1Q96QH2 718 aa25.64■■□□□ 1.69
SSBP3-216ENST00000610401 ZFYVE16Q7Z3T8 1539 aa25.63■■□□□ 1.69
SSBP3-216ENST00000610401 PRKAR2BP31323 418 aa25.63■■□□□ 1.69
SSBP3-216ENST00000610401 TSPYL6Q8N831 410 aa25.62■■□□□ 1.69
SSBP3-216ENST00000610401 ATAD2Q6PL18 1390 aa25.62■■□□□ 1.69
SSBP3-216ENST00000610401 FYB1O15117 783 aa25.61■■□□□ 1.69
SSBP3-216ENST00000610401 CABP1Q9NZU7 370 aa25.61■■□□□ 1.69
SSBP3-216ENST00000610401 ZCCHC11Q5TAX3 1644 aaKnown RBP25.61■■□□□ 1.69
SSBP3-216ENST00000610401 DIAPH1O60610 1272 aaKnown RBP25.6■■□□□ 1.69
SSBP3-216ENST00000610401 NCLP19338 710 aaKnown RBP25.6■■□□□ 1.69
SSBP3-216ENST00000610401 DCTN1Q14203 1278 aa25.6■■□□□ 1.69
SSBP3-216ENST00000610401 RSPH6AQ9H0K4 717 aa25.6■■□□□ 1.69
SSBP3-216ENST00000610401 PNNQ9H307 717 aaKnown RBP25.6■■□□□ 1.69
SSBP3-216ENST00000610401 ATP7AQ04656 1500 aa25.59■■□□□ 1.69
SSBP3-216ENST00000610401 SOX12O15370 315 aa25.59■■□□□ 1.69
SSBP3-216ENST00000610401 TNPO1Q92973 898 aaKnown RBP25.59■■□□□ 1.69
SSBP3-216ENST00000610401 PHACTR3Q96KR7 559 aa25.58■■□□□ 1.69
SSBP3-216ENST00000610401 ZBTB40Q9NUA8 1239 aa25.58■■□□□ 1.69
SSBP3-216ENST00000610401 CHD1LQ86WJ1 897 aa25.58■■□□□ 1.69
SSBP3-216ENST00000610401 ZNF518AQ6AHZ1 1483 aa25.58■■□□□ 1.69
SSBP3-216ENST00000610401 A0A1W2PP64 1363 aa25.58■■□□□ 1.69
SSBP3-216ENST00000610401 PLEKHF1Q96S99 279 aa25.58■■□□□ 1.68
SSBP3-216ENST00000610401 STAG3Q9UJ98 1225 aa25.58■■□□□ 1.68
SSBP3-216ENST00000610401 IDI1Q13907 227 aa25.57■■□□□ 1.68
SSBP3-216ENST00000610401 MAP3K4Q9Y6R4 1608 aa25.57■■□□□ 1.68
SSBP3-216ENST00000610401 CD109Q6YHK3 1445 aa25.57■■□□□ 1.68
SSBP3-216ENST00000610401 CCDC27Q2M243 656 aa25.56■■□□□ 1.68
SSBP3-216ENST00000610401 FOXD4L5Q5VV16 416 aaPredicted RBP25.56■■□□□ 1.68
SSBP3-216ENST00000610401 FOXD4L4Q8WXT5 416 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms