RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 ATRNO75882 1429 aa26.14■■□□□ 1.78
CHMP4A-211ENST00000609024 CCDC125Q86Z20 511 aa26.14■■□□□ 1.78
CHMP4A-211ENST00000609024 LRPPRCP42704 1394 aaKnown RBP26.14■■□□□ 1.78
CHMP4A-211ENST00000609024 SLC4A1APQ9BWU0 796 aaKnown RBP26.13■■□□□ 1.77
CHMP4A-211ENST00000609024 COL22A1Q8NFW1 1626 aaPredicted RBP26.13■■□□□ 1.77
CHMP4A-211ENST00000609024 FOXO3O43524 673 aa26.11■■□□□ 1.77
CHMP4A-211ENST00000609024 PRAG1Q86YV5 1406 aa26.11■■□□□ 1.77
CHMP4A-211ENST00000609024 XPCQ01831 940 aaPredicted RBP26.1■■□□□ 1.77
CHMP4A-211ENST00000609024 NAIPQ13075 1403 aa26.1■■□□□ 1.77
CHMP4A-211ENST00000609024 GJD4Q96KN9 370 aaPredicted RBP26.08■■□□□ 1.77
CHMP4A-211ENST00000609024 MYOM2P54296 1465 aa26.08■■□□□ 1.77
CHMP4A-211ENST00000609024 CDC42BPGQ6DT37 1551 aa26.07■■□□□ 1.76
CHMP4A-211ENST00000609024 NUTM2FA1L443 756 aa26.07■■□□□ 1.76
CHMP4A-211ENST00000609024 STK26Q9P289 416 aa26.07■■□□□ 1.76
CHMP4A-211ENST00000609024 PPLO60437 1756 aa26.07■■□□□ 1.76
CHMP4A-211ENST00000609024 BCL9LQ86UU0 1499 aa26.04■■□□□ 1.76
CHMP4A-211ENST00000609024 HAP1P54257 671 aaPredicted RBP26.04■■□□□ 1.76
CHMP4A-211ENST00000609024 MARF1Q9Y4F3 1742 aaKnown RBP26.04■■□□□ 1.76
CHMP4A-211ENST00000609024 PXDNQ92626 1479 aa26.04■■□□□ 1.76
CHMP4A-211ENST00000609024 RRBP1Q9P2E9 1410 aaKnown RBP26.02■■□□□ 1.76
CHMP4A-211ENST00000609024 SF3B2Q13435 895 aaKnown RBP26■■□□□ 1.75
CHMP4A-211ENST00000609024 RGL3Q3MIN7 710 aa26■■□□□ 1.75
CHMP4A-211ENST00000609024 WAPLQ7Z5K2 1190 aa26■■□□□ 1.75
CHMP4A-211ENST00000609024 UNC5CLQ8IV45 518 aa26■■□□□ 1.75
CHMP4A-211ENST00000609024 SRCAPQ6ZRS2 3230 aa25.97■■□□□ 1.75
CHMP4A-211ENST00000609024 CCDC144AA2RUR9 1427 aa25.97■■□□□ 1.75
CHMP4A-211ENST00000609024 ADGRF5Q8IZF2 1346 aa25.97■■□□□ 1.75
CHMP4A-211ENST00000609024 BLMP54132 1417 aaPredicted RBP25.95■■□□□ 1.74
CHMP4A-211ENST00000609024 ANKRD30BQ9BXX2 1392 aa25.95■■□□□ 1.74
CHMP4A-211ENST00000609024 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.94■■□□□ 1.74
CHMP4A-211ENST00000609024 SPATA31A3Q5VYP0 1347 aa25.94■■□□□ 1.74
CHMP4A-211ENST00000609024 KRT28Q7Z3Y7 464 aa25.94■■□□□ 1.74
CHMP4A-211ENST00000609024 CCDC9Q9Y3X0 531 aaKnown RBP25.94■■□□□ 1.74
CHMP4A-211ENST00000609024 RALGAPBQ86X10 1494 aa25.93■■□□□ 1.74
CHMP4A-211ENST00000609024 PSME1Q06323 249 aa25.93■■□□□ 1.74
CHMP4A-211ENST00000609024 TMEM132EQ6IEE7 984 aa25.93■■□□□ 1.74
CHMP4A-211ENST00000609024 TECPR2O15040 1411 aa25.93■■□□□ 1.74
CHMP4A-211ENST00000609024 PLEKHG5O94827 1062 aa25.92■■□□□ 1.74
CHMP4A-211ENST00000609024 KIF1AQ12756 1690 aa25.92■■□□□ 1.74
CHMP4A-211ENST00000609024 EP400Q96L91 3159 aa25.92■■□□□ 1.74
CHMP4A-211ENST00000609024 ABCC11Q96J66 1382 aa25.92■■□□□ 1.74
CHMP4A-211ENST00000609024 LMOD2Q6P5Q4 547 aa25.9■■□□□ 1.74
CHMP4A-211ENST00000609024 SLIT2O94813 1529 aa25.89■■□□□ 1.74
CHMP4A-211ENST00000609024 PLEKHH1Q9ULM0 1364 aa25.88■■□□□ 1.73
CHMP4A-211ENST00000609024 SEPT12Q8IYM1 358 aa25.88■■□□□ 1.73
CHMP4A-211ENST00000609024 FMN2Q9NZ56 1722 aa25.88■■□□□ 1.73
CHMP4A-211ENST00000609024 GLI3P10071 1580 aa25.87■■□□□ 1.73
CHMP4A-211ENST00000609024 A0A0G2JS52 829 aa25.87■■□□□ 1.73
CHMP4A-211ENST00000609024 MYT1Q01538 1121 aa25.87■■□□□ 1.73
CHMP4A-211ENST00000609024 PHF8Q9UPP1 1060 aa25.87■■□□□ 1.73
CHMP4A-211ENST00000609024 USP32Q8NFA0 1604 aa25.87■■□□□ 1.73
CHMP4A-211ENST00000609024 KNDC1Q76NI1 1749 aa25.86■■□□□ 1.73
CHMP4A-211ENST00000609024 VPS72Q15906 364 aa25.85■■□□□ 1.73
CHMP4A-211ENST00000609024 DEFB132Q7Z7B7 95 aa25.85■■□□□ 1.73
CHMP4A-211ENST00000609024 YTHDC2Q9H6S0 1430 aaKnown RBP25.85■■□□□ 1.73
CHMP4A-211ENST00000609024 TNS3Q68CZ2 1445 aa25.84■■□□□ 1.73
CHMP4A-211ENST00000609024 CABLES1Q8TDN4 633 aa25.83■■□□□ 1.73
CHMP4A-211ENST00000609024 PIK3C2GO75747 1445 aa25.82■■□□□ 1.72
CHMP4A-211ENST00000609024 SPATA31E1Q6ZUB1 1445 aa25.82■■□□□ 1.72
CHMP4A-211ENST00000609024 KRT27Q7Z3Y8 459 aa25.82■■□□□ 1.72
CHMP4A-211ENST00000609024 SIRT1Q96EB6 747 aa25.82■■□□□ 1.72
CHMP4A-211ENST00000609024 MPHOSPH9Q99550 1183 aa25.81■■□□□ 1.72
CHMP4A-211ENST00000609024 ARHGEF10O15013 1369 aa25.81■■□□□ 1.72
CHMP4A-211ENST00000609024 DHX57Q6P158 1386 aaKnown RBP25.81■■□□□ 1.72
CHMP4A-211ENST00000609024 IFT172Q9UG01 1749 aa25.8■■□□□ 1.72
CHMP4A-211ENST00000609024 BRWD3Q6RI45 1802 aa25.8■■□□□ 1.72
CHMP4A-211ENST00000609024 SAFB2Q14151 953 aaKnown RBP eCLIP25.78■■□□□ 1.72
CHMP4A-211ENST00000609024 SBNO1A3KN83 1393 aa25.78■■□□□ 1.72
CHMP4A-211ENST00000609024 BAG6P46379 1132 aa25.77■■□□□ 1.72
CHMP4A-211ENST00000609024 POGKQ9P215 609 aa25.77■■□□□ 1.72
CHMP4A-211ENST00000609024 NWD2Q9ULI1 1742 aa25.77■■□□□ 1.72
CHMP4A-211ENST00000609024 PLCH1Q4KWH8 1693 aa25.76■■□□□ 1.71
CHMP4A-211ENST00000609024 RGPD8O14715 1765 aaPredicted RBP25.75■■□□□ 1.71
CHMP4A-211ENST00000609024 C14orf93Q9H972 538 aaKnown RBP25.75■■□□□ 1.71
CHMP4A-211ENST00000609024 ONECUT3O60422 494 aaPredicted RBP25.74■■□□□ 1.71
CHMP4A-211ENST00000609024 PRAM1Q96QH2 718 aa25.74■■□□□ 1.71
CHMP4A-211ENST00000609024 PMFBP1Q8TBY8 1022 aa25.73■■□□□ 1.71
CHMP4A-211ENST00000609024 NRXN1Q9ULB1 1477 aa25.72■■□□□ 1.71
CHMP4A-211ENST00000609024 CFAP70Q5T0N1 1121 aa25.72■■□□□ 1.71
CHMP4A-211ENST00000609024 FAM83GA6ND36 823 aa25.71■■□□□ 1.71
CHMP4A-211ENST00000609024 FAM98CQ17RN3 349 aaKnown RBP25.7■■□□□ 1.7
CHMP4A-211ENST00000609024 ACIN1Q9UKV3 1341 aaKnown RBP25.69■■□□□ 1.7
CHMP4A-211ENST00000609024 PSDA5PKW4 1024 aaPredicted RBP25.69■■□□□ 1.7
CHMP4A-211ENST00000609024 BTG4Q9NY30 223 aa25.69■■□□□ 1.7
CHMP4A-211ENST00000609024 GPRASP1Q5JY77 1395 aa25.69■■□□□ 1.7
CHMP4A-211ENST00000609024 ANKARQ7Z5J8 1434 aa25.67■■□□□ 1.7
CHMP4A-211ENST00000609024 ABCA3Q99758 1704 aa25.67■■□□□ 1.7
CHMP4A-211ENST00000609024 LRP5O75197 1615 aa25.66■■□□□ 1.7
CHMP4A-211ENST00000609024 EIF3AQ14152 1382 aaKnown RBP25.64■■□□□ 1.69
CHMP4A-211ENST00000609024 PAK3O75914 559 aaPredicted RBP25.61■■□□□ 1.69
CHMP4A-211ENST00000609024 HRCP23327 699 aa25.61■■□□□ 1.69
CHMP4A-211ENST00000609024 HIRIP3Q9BW71 556 aaPredicted RBP25.61■■□□□ 1.69
CHMP4A-211ENST00000609024 COL14A1Q05707 1796 aaKnown RBP25.6■■□□□ 1.69
CHMP4A-211ENST00000609024 DLC1Q96QB1 1528 aa25.6■■□□□ 1.69
CHMP4A-211ENST00000609024 EN1Q05925 392 aaPredicted RBP25.6■■□□□ 1.69
CHMP4A-211ENST00000609024 NGDNQ8NEJ9 315 aaKnown RBP25.6■■□□□ 1.69
CHMP4A-211ENST00000609024 TRAK1Q9UPV9 953 aa25.59■■□□□ 1.69
CHMP4A-211ENST00000609024 MINK1Q8N4C8 1332 aaPredicted RBP25.59■■□□□ 1.69
CHMP4A-211ENST00000609024 PRDM11Q9NQV5 511 aa25.58■■□□□ 1.69
CHMP4A-211ENST00000609024 RGPD1P0DJD0 1748 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms