RNA–Protein interactions for RNA: ENST00000608369.1

LINC00963-211, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 961 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-211ENST00000608369 CCDC125Q86Z20 511 aa16.79■□□□□ 0.28
LINC00963-211ENST00000608369 USP21Q9UK80 565 aa16.79■□□□□ 0.28
LINC00963-211ENST00000608369 ROBO2Q9HCK4 1378 aa16.78■□□□□ 0.28
LINC00963-211ENST00000608369 CDC42BPGQ6DT37 1551 aa16.78■□□□□ 0.28
LINC00963-211ENST00000608369 ADAMTS2O95450 1211 aa16.78■□□□□ 0.28
LINC00963-211ENST00000608369 DDX17Q92841 729 aaKnown RBP16.77■□□□□ 0.28
LINC00963-211ENST00000608369 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
LINC00963-211ENST00000608369 PPLO60437 1756 aa16.74■□□□□ 0.27
LINC00963-211ENST00000608369 ATRNO75882 1429 aa16.74■□□□□ 0.27
LINC00963-211ENST00000608369 MYOM2P54296 1465 aa16.73■□□□□ 0.27
LINC00963-211ENST00000608369 TECPR2O15040 1411 aa16.73■□□□□ 0.27
LINC00963-211ENST00000608369 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
LINC00963-211ENST00000608369 EP400Q96L91 3159 aa16.73■□□□□ 0.27
LINC00963-211ENST00000608369 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
LINC00963-211ENST00000608369 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
LINC00963-211ENST00000608369 ANKRD30BQ9BXX2 1392 aa16.72■□□□□ 0.27
LINC00963-211ENST00000608369 ESCO1Q5FWF5 840 aa16.71■□□□□ 0.27
LINC00963-211ENST00000608369 ZRANB1Q9UGI0 708 aa16.71■□□□□ 0.27
LINC00963-211ENST00000608369 PXDNQ92626 1479 aa16.7■□□□□ 0.26
LINC00963-211ENST00000608369 MARF1Q9Y4F3 1742 aaKnown RBP16.7■□□□□ 0.26
LINC00963-211ENST00000608369 CCDC144AA2RUR9 1427 aa16.69■□□□□ 0.26
LINC00963-211ENST00000608369 BCL9LQ86UU0 1499 aa16.68■□□□□ 0.26
LINC00963-211ENST00000608369 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.68■□□□□ 0.26
LINC00963-211ENST00000608369 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
LINC00963-211ENST00000608369 KIF1AQ12756 1690 aa16.67■□□□□ 0.26
LINC00963-211ENST00000608369 GJD4Q96KN9 370 aaPredicted RBP16.67■□□□□ 0.26
LINC00963-211ENST00000608369 FOXO3O43524 673 aa16.66■□□□□ 0.26
LINC00963-211ENST00000608369 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
LINC00963-211ENST00000608369 KNDC1Q76NI1 1749 aa16.66■□□□□ 0.26
LINC00963-211ENST00000608369 SIRT1Q96EB6 747 aa16.66■□□□□ 0.26
LINC00963-211ENST00000608369 HRCP23327 699 aa16.64■□□□□ 0.25
LINC00963-211ENST00000608369 UNC5CLQ8IV45 518 aa16.63■□□□□ 0.25
LINC00963-211ENST00000608369 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
LINC00963-211ENST00000608369 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
LINC00963-211ENST00000608369 SLIT2O94813 1529 aa16.62■□□□□ 0.25
LINC00963-211ENST00000608369 SPATA31A3Q5VYP0 1347 aa16.62■□□□□ 0.25
LINC00963-211ENST00000608369 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
LINC00963-211ENST00000608369 PSME1Q06323 249 aa16.61■□□□□ 0.25
LINC00963-211ENST00000608369 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
LINC00963-211ENST00000608369 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
LINC00963-211ENST00000608369 FMN2Q9NZ56 1722 aa16.6■□□□□ 0.25
LINC00963-211ENST00000608369 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
LINC00963-211ENST00000608369 USP32Q8NFA0 1604 aa16.59■□□□□ 0.25
LINC00963-211ENST00000608369 SF3B2Q13435 895 aaKnown RBP16.58■□□□□ 0.24
LINC00963-211ENST00000608369 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.24
LINC00963-211ENST00000608369 STK26Q9P289 416 aa16.58■□□□□ 0.24
LINC00963-211ENST00000608369 ARHGEF10O15013 1369 aa16.58■□□□□ 0.24
LINC00963-211ENST00000608369 RALGAPBQ86X10 1494 aa16.58■□□□□ 0.24
LINC00963-211ENST00000608369 TNS3Q68CZ2 1445 aa16.57■□□□□ 0.24
LINC00963-211ENST00000608369 SBNO1A3KN83 1393 aa16.57■□□□□ 0.24
LINC00963-211ENST00000608369 NWD2Q9ULI1 1742 aa16.56■□□□□ 0.24
LINC00963-211ENST00000608369 DHX57Q6P158 1386 aaKnown RBP16.56■□□□□ 0.24
LINC00963-211ENST00000608369 HAP1P54257 671 aaPredicted RBP16.56■□□□□ 0.24
LINC00963-211ENST00000608369 XPCQ01831 940 aaPredicted RBP16.56■□□□□ 0.24
LINC00963-211ENST00000608369 RGL3Q3MIN7 710 aa16.56■□□□□ 0.24
LINC00963-211ENST00000608369 KRT28Q7Z3Y7 464 aa16.56■□□□□ 0.24
LINC00963-211ENST00000608369 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
LINC00963-211ENST00000608369 VPS72Q15906 364 aa16.55■□□□□ 0.24
LINC00963-211ENST00000608369 MPHOSPH9Q99550 1183 aa16.55■□□□□ 0.24
LINC00963-211ENST00000608369 GLI3P10071 1580 aa16.55■□□□□ 0.24
LINC00963-211ENST00000608369 C14orf93Q9H972 538 aaKnown RBP16.54■□□□□ 0.24
LINC00963-211ENST00000608369 PHF8Q9UPP1 1060 aa16.54■□□□□ 0.24
LINC00963-211ENST00000608369 NRXN1Q9ULB1 1477 aa16.54■□□□□ 0.24
LINC00963-211ENST00000608369 ANKARQ7Z5J8 1434 aa16.53■□□□□ 0.24
LINC00963-211ENST00000608369 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
LINC00963-211ENST00000608369 PLEKHH1Q9ULM0 1364 aa16.52■□□□□ 0.24
LINC00963-211ENST00000608369 NUTM2FA1L443 756 aa16.52■□□□□ 0.24
LINC00963-211ENST00000608369 TMEM132EQ6IEE7 984 aa16.52■□□□□ 0.24
LINC00963-211ENST00000608369 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
LINC00963-211ENST00000608369 SEPT12Q8IYM1 358 aa16.5■□□□□ 0.23
LINC00963-211ENST00000608369 ADGRB2O60241 1585 aa16.48■□□□□ 0.23
LINC00963-211ENST00000608369 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
LINC00963-211ENST00000608369 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
LINC00963-211ENST00000608369 PLCH1Q4KWH8 1693 aa16.48■□□□□ 0.23
LINC00963-211ENST00000608369 BRWD3Q6RI45 1802 aa16.47■□□□□ 0.23
LINC00963-211ENST00000608369 LRP5O75197 1615 aa16.46■□□□□ 0.23
LINC00963-211ENST00000608369 PRAM1Q96QH2 718 aa16.46■□□□□ 0.23
LINC00963-211ENST00000608369 CCDC9Q9Y3X0 531 aaKnown RBP16.46■□□□□ 0.23
LINC00963-211ENST00000608369 GPRASP1Q5JY77 1395 aa16.46■□□□□ 0.23
LINC00963-211ENST00000608369 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
LINC00963-211ENST00000608369 ABCA3Q99758 1704 aa16.45■□□□□ 0.22
LINC00963-211ENST00000608369 BAG6P46379 1132 aa16.45■□□□□ 0.22
LINC00963-211ENST00000608369 POGKQ9P215 609 aa16.45■□□□□ 0.22
LINC00963-211ENST00000608369 RGPD8O14715 1765 aaPredicted RBP16.45■□□□□ 0.22
LINC00963-211ENST00000608369 LMOD2Q6P5Q4 547 aa16.44■□□□□ 0.22
LINC00963-211ENST00000608369 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
LINC00963-211ENST00000608369 COL14A1Q05707 1796 aaKnown RBP16.42■□□□□ 0.22
LINC00963-211ENST00000608369 FAM83GA6ND36 823 aa16.42■□□□□ 0.22
LINC00963-211ENST00000608369 DEFB132Q7Z7B7 95 aa16.42■□□□□ 0.22
LINC00963-211ENST00000608369 CCER1Q8TC90 406 aaPredicted RBP16.42■□□□□ 0.22
LINC00963-211ENST00000608369 CABLES1Q8TDN4 633 aa16.42■□□□□ 0.22
LINC00963-211ENST00000608369 TULP4Q9NRJ4 1543 aa16.4■□□□□ 0.22
LINC00963-211ENST00000608369 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
LINC00963-211ENST00000608369 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
LINC00963-211ENST00000608369 DISP2A7MBM2 1401 aa16.39■□□□□ 0.21
LINC00963-211ENST00000608369 A0A0G2JS52 829 aa16.39■□□□□ 0.21
LINC00963-211ENST00000608369 MYT1Q01538 1121 aa16.39■□□□□ 0.21
LINC00963-211ENST00000608369 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
LINC00963-211ENST00000608369 ALS2Q96Q42 1657 aa16.39■□□□□ 0.21
LINC00963-211ENST00000608369 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms