RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
HDDC2-203ENST00000608284 ZRANB1Q9UGI0 708 aa23.68■■□□□ 1.38
HDDC2-203ENST00000608284 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
HDDC2-203ENST00000608284 STK26Q9P289 416 aa23.67■■□□□ 1.38
HDDC2-203ENST00000608284 FOXO3O43524 673 aa23.66■■□□□ 1.38
HDDC2-203ENST00000608284 CCDC125Q86Z20 511 aa23.66■■□□□ 1.38
HDDC2-203ENST00000608284 PRAG1Q86YV5 1406 aa23.65■■□□□ 1.38
HDDC2-203ENST00000608284 RGL3Q3MIN7 710 aa23.64■■□□□ 1.37
HDDC2-203ENST00000608284 NUTM2FA1L443 756 aa23.62■■□□□ 1.37
HDDC2-203ENST00000608284 XPCQ01831 940 aaPredicted RBP23.62■■□□□ 1.37
HDDC2-203ENST00000608284 LAMC1P11047 1609 aa23.62■■□□□ 1.37
HDDC2-203ENST00000608284 ATRNO75882 1429 aa23.61■■□□□ 1.37
HDDC2-203ENST00000608284 WAPLQ7Z5K2 1190 aa23.6■■□□□ 1.37
HDDC2-203ENST00000608284 GJD4Q96KN9 370 aaPredicted RBP23.6■■□□□ 1.37
HDDC2-203ENST00000608284 HAP1P54257 671 aaPredicted RBP23.59■■□□□ 1.37
HDDC2-203ENST00000608284 CCDC144AA2RUR9 1427 aa23.59■■□□□ 1.37
HDDC2-203ENST00000608284 ADGRF5Q8IZF2 1346 aa23.59■■□□□ 1.37
HDDC2-203ENST00000608284 ANKRD30BQ9BXX2 1392 aa23.58■■□□□ 1.37
HDDC2-203ENST00000608284 UNC5CLQ8IV45 518 aa23.56■■□□□ 1.36
HDDC2-203ENST00000608284 MYOM2P54296 1465 aa23.56■■□□□ 1.36
HDDC2-203ENST00000608284 PSME1Q06323 249 aa23.55■■□□□ 1.36
HDDC2-203ENST00000608284 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
HDDC2-203ENST00000608284 ABCC11Q96J66 1382 aa23.54■■□□□ 1.36
HDDC2-203ENST00000608284 CDC42BPGQ6DT37 1551 aa23.54■■□□□ 1.36
HDDC2-203ENST00000608284 KRT28Q7Z3Y7 464 aa23.54■■□□□ 1.36
HDDC2-203ENST00000608284 COL22A1Q8NFW1 1626 aaPredicted RBP23.53■■□□□ 1.36
HDDC2-203ENST00000608284 BCL9LQ86UU0 1499 aa23.53■■□□□ 1.36
HDDC2-203ENST00000608284 PXDNQ92626 1479 aa23.52■■□□□ 1.36
HDDC2-203ENST00000608284 SF3B2Q13435 895 aaKnown RBP23.52■■□□□ 1.36
HDDC2-203ENST00000608284 MPHOSPH9Q99550 1183 aa23.51■■□□□ 1.35
HDDC2-203ENST00000608284 SPATA31A3Q5VYP0 1347 aa23.51■■□□□ 1.35
HDDC2-203ENST00000608284 PPLO60437 1756 aa23.5■■□□□ 1.35
HDDC2-203ENST00000608284 SIRT1Q96EB6 747 aa23.5■■□□□ 1.35
HDDC2-203ENST00000608284 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
HDDC2-203ENST00000608284 TECPR2O15040 1411 aa23.49■■□□□ 1.35
HDDC2-203ENST00000608284 LMOD2Q6P5Q4 547 aa23.48■■□□□ 1.35
HDDC2-203ENST00000608284 CCDC9Q9Y3X0 531 aaKnown RBP23.48■■□□□ 1.35
HDDC2-203ENST00000608284 PHF8Q9UPP1 1060 aa23.46■■□□□ 1.35
HDDC2-203ENST00000608284 DHX57Q6P158 1386 aaKnown RBP23.45■■□□□ 1.34
HDDC2-203ENST00000608284 PLEKHH1Q9ULM0 1364 aa23.45■■□□□ 1.34
HDDC2-203ENST00000608284 PLEKHG5O94827 1062 aa23.45■■□□□ 1.34
HDDC2-203ENST00000608284 YTHDC2Q9H6S0 1430 aaKnown RBP23.44■■□□□ 1.34
HDDC2-203ENST00000608284 SPATA31E1Q6ZUB1 1445 aa23.43■■□□□ 1.34
HDDC2-203ENST00000608284 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
HDDC2-203ENST00000608284 SRCAPQ6ZRS2 3230 aa23.43■■□□□ 1.34
HDDC2-203ENST00000608284 SEPT12Q8IYM1 358 aa23.42■■□□□ 1.34
HDDC2-203ENST00000608284 POGKQ9P215 609 aa23.42■■□□□ 1.34
HDDC2-203ENST00000608284 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
HDDC2-203ENST00000608284 VPS72Q15906 364 aa23.41■■□□□ 1.34
HDDC2-203ENST00000608284 RALGAPBQ86X10 1494 aa23.41■■□□□ 1.34
HDDC2-203ENST00000608284 PIK3C2GO75747 1445 aa23.41■■□□□ 1.34
HDDC2-203ENST00000608284 SLIT2O94813 1529 aa23.39■■□□□ 1.34
HDDC2-203ENST00000608284 A0A0G2JS52 829 aa23.39■■□□□ 1.33
HDDC2-203ENST00000608284 MYT1Q01538 1121 aa23.39■■□□□ 1.33
HDDC2-203ENST00000608284 SAFB2Q14151 953 aaKnown RBP eCLIP23.39■■□□□ 1.33
HDDC2-203ENST00000608284 CABLES1Q8TDN4 633 aa23.39■■□□□ 1.33
HDDC2-203ENST00000608284 PRAM1Q96QH2 718 aa23.38■■□□□ 1.33
HDDC2-203ENST00000608284 ARHGEF10O15013 1369 aa23.38■■□□□ 1.33
HDDC2-203ENST00000608284 TNS3Q68CZ2 1445 aa23.37■■□□□ 1.33
HDDC2-203ENST00000608284 CFAP70Q5T0N1 1121 aa23.37■■□□□ 1.33
HDDC2-203ENST00000608284 KIF1AQ12756 1690 aa23.37■■□□□ 1.33
HDDC2-203ENST00000608284 SBNO1A3KN83 1393 aa23.37■■□□□ 1.33
HDDC2-203ENST00000608284 MARF1Q9Y4F3 1742 aaKnown RBP23.36■■□□□ 1.33
HDDC2-203ENST00000608284 KRT27Q7Z3Y8 459 aa23.36■■□□□ 1.33
HDDC2-203ENST00000608284 DEFB132Q7Z7B7 95 aa23.34■■□□□ 1.33
HDDC2-203ENST00000608284 ONECUT3O60422 494 aaPredicted RBP23.33■■□□□ 1.33
HDDC2-203ENST00000608284 PMFBP1Q8TBY8 1022 aa23.33■■□□□ 1.33
HDDC2-203ENST00000608284 FMN2Q9NZ56 1722 aa23.33■■□□□ 1.32
HDDC2-203ENST00000608284 EP400Q96L91 3159 aa23.32■■□□□ 1.32
HDDC2-203ENST00000608284 KNDC1Q76NI1 1749 aa23.32■■□□□ 1.32
HDDC2-203ENST00000608284 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.32■■□□□ 1.32
HDDC2-203ENST00000608284 FAM83GA6ND36 823 aa23.31■■□□□ 1.32
HDDC2-203ENST00000608284 GPRASP1Q5JY77 1395 aa23.3■■□□□ 1.32
HDDC2-203ENST00000608284 BAG6P46379 1132 aa23.3■■□□□ 1.32
HDDC2-203ENST00000608284 GLI3P10071 1580 aa23.3■■□□□ 1.32
HDDC2-203ENST00000608284 USP32Q8NFA0 1604 aa23.3■■□□□ 1.32
HDDC2-203ENST00000608284 NRXN1Q9ULB1 1477 aa23.28■■□□□ 1.32
HDDC2-203ENST00000608284 EIF3AQ14152 1382 aaKnown RBP23.27■■□□□ 1.32
HDDC2-203ENST00000608284 BTG4Q9NY30 223 aa23.27■■□□□ 1.32
HDDC2-203ENST00000608284 ANKARQ7Z5J8 1434 aa23.26■■□□□ 1.31
HDDC2-203ENST00000608284 IFT172Q9UG01 1749 aa23.26■■□□□ 1.31
HDDC2-203ENST00000608284 FAM98CQ17RN3 349 aaKnown RBP23.26■■□□□ 1.31
HDDC2-203ENST00000608284 TRAK1Q9UPV9 953 aa23.26■■□□□ 1.31
HDDC2-203ENST00000608284 NGDNQ8NEJ9 315 aaKnown RBP23.25■■□□□ 1.31
HDDC2-203ENST00000608284 PAK3O75914 559 aaPredicted RBP23.24■■□□□ 1.31
HDDC2-203ENST00000608284 HIRIP3Q9BW71 556 aaPredicted RBP23.24■■□□□ 1.31
HDDC2-203ENST00000608284 MINK1Q8N4C8 1332 aaPredicted RBP23.22■■□□□ 1.31
HDDC2-203ENST00000608284 KDM2AQ9Y2K7 1162 aa23.21■■□□□ 1.31
HDDC2-203ENST00000608284 STAC3Q96MF2 364 aa23.2■■□□□ 1.3
HDDC2-203ENST00000608284 DLC1Q96QB1 1528 aa23.19■■□□□ 1.3
HDDC2-203ENST00000608284 WASLO00401 505 aaPredicted RBP23.19■■□□□ 1.3
HDDC2-203ENST00000608284 NWD2Q9ULI1 1742 aa23.19■■□□□ 1.3
HDDC2-203ENST00000608284 PRDM11Q9NQV5 511 aa23.18■■□□□ 1.3
HDDC2-203ENST00000608284 DCAF11Q8TEB1 546 aa23.17■■□□□ 1.3
HDDC2-203ENST00000608284 PSDA5PKW4 1024 aaPredicted RBP23.16■■□□□ 1.3
HDDC2-203ENST00000608284 RGPD8O14715 1765 aaPredicted RBP23.16■■□□□ 1.3
HDDC2-203ENST00000608284 BRWD3Q6RI45 1802 aa23.15■■□□□ 1.3
HDDC2-203ENST00000608284 PLCH1Q4KWH8 1693 aa23.15■■□□□ 1.3
HDDC2-203ENST00000608284 SPATA31A5Q5VU36 1347 aa23.14■■□□□ 1.3
HDDC2-203ENST00000608284 SPATA31A7Q8IWB4 1347 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms