RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 CLCN1P35523 988 aa12.94□□□□□ -0.34
LINC00458-206ENST00000607494 Q3C1V9 767 aa12.92□□□□□ -0.34
LINC00458-206ENST00000607494 KRI1Q8N9T8 703 aaKnown RBP12.92□□□□□ -0.34
LINC00458-206ENST00000607494 RPIAP49247 311 aa12.91□□□□□ -0.34
LINC00458-206ENST00000607494 MYT1Q01538 1121 aa12.91□□□□□ -0.34
LINC00458-206ENST00000607494 ZC3H15Q8WU90 426 aaKnown RBP12.91□□□□□ -0.34
LINC00458-206ENST00000607494 SYMPKQ92797 1274 aaKnown RBP12.91□□□□□ -0.34
LINC00458-206ENST00000607494 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
LINC00458-206ENST00000607494 USB1Q9BQ65 265 aaKnown RBP12.89□□□□□ -0.35
LINC00458-206ENST00000607494 ZMYND10O75800 440 aa12.88□□□□□ -0.35
LINC00458-206ENST00000607494 DGAT1O75907 488 aa12.88□□□□□ -0.35
LINC00458-206ENST00000607494 MMP16P51512 607 aa12.88□□□□□ -0.35
LINC00458-206ENST00000607494 USP46P62068 366 aa12.88□□□□□ -0.35
LINC00458-206ENST00000607494 ZNF787Q6DD87 383 aa12.87□□□□□ -0.35
LINC00458-206ENST00000607494 ST8SIA5O15466 376 aa12.86□□□□□ -0.35
LINC00458-206ENST00000607494 DXOO77932 396 aaKnown RBP12.86□□□□□ -0.35
LINC00458-206ENST00000607494 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
LINC00458-206ENST00000607494 CD2BP2O95400 341 aaKnown RBP12.85□□□□□ -0.35
LINC00458-206ENST00000607494 ZBTB24O43167 697 aaPredicted RBP12.84□□□□□ -0.35
LINC00458-206ENST00000607494 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
LINC00458-206ENST00000607494 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
LINC00458-206ENST00000607494 POTECB2RU33 542 aa12.83□□□□□ -0.36
LINC00458-206ENST00000607494 TRIM32Q13049 653 aa12.83□□□□□ -0.36
LINC00458-206ENST00000607494 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
LINC00458-206ENST00000607494 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.36
LINC00458-206ENST00000607494 TOR4AQ9NXH8 423 aa12.82□□□□□ -0.36
LINC00458-206ENST00000607494 GIGYF2Q6Y7W6 1299 aaKnown RBP12.81□□□□□ -0.36
LINC00458-206ENST00000607494 AMHR2Q16671 573 aa12.8□□□□□ -0.36
LINC00458-206ENST00000607494 NDUFV2P19404 249 aa12.79□□□□□ -0.36
LINC00458-206ENST00000607494 CYP4X1Q8N118 509 aa12.79□□□□□ -0.36
LINC00458-206ENST00000607494 SPIRE2Q8WWL2 714 aa12.79□□□□□ -0.36
LINC00458-206ENST00000607494 FDX1P10109 184 aa12.78□□□□□ -0.36
LINC00458-206ENST00000607494 AAASQ9NRG9 546 aa12.78□□□□□ -0.36
LINC00458-206ENST00000607494 JUNDP17535 347 aa12.77□□□□□ -0.37
LINC00458-206ENST00000607494 MOXD2PA6NHM9 499 aa12.76□□□□□ -0.37
LINC00458-206ENST00000607494 DACH1Q9UI36 760 aa12.76□□□□□ -0.37
LINC00458-206ENST00000607494 C6orf229H3BNL8 230 aa12.75□□□□□ -0.37
LINC00458-206ENST00000607494 RETREG3Q86VR2 466 aa12.75□□□□□ -0.37
LINC00458-206ENST00000607494 PARP9Q8IXQ6 854 aa12.75□□□□□ -0.37
LINC00458-206ENST00000607494 WNT7AO00755 349 aa12.74□□□□□ -0.37
LINC00458-206ENST00000607494 SKOR1P84550 965 aa12.74□□□□□ -0.37
LINC00458-206ENST00000607494 MRGPRX2Q96LB1 330 aa12.74□□□□□ -0.37
LINC00458-206ENST00000607494 TTC24A2A3L6 582 aaPredicted RBP12.73□□□□□ -0.37
LINC00458-206ENST00000607494 ZNF775Q96BV0 537 aaPredicted RBP12.73□□□□□ -0.37
LINC00458-206ENST00000607494 BEGAINQ9BUH8 593 aa12.73□□□□□ -0.37
LINC00458-206ENST00000607494 TRIM66O15016 1216 aa12.72□□□□□ -0.37
LINC00458-206ENST00000607494 PTCRAQ6ISU1 281 aaPredicted RBP12.72□□□□□ -0.37
LINC00458-206ENST00000607494 MS4A1P11836 297 aa12.71□□□□□ -0.37
LINC00458-206ENST00000607494 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.37
LINC00458-206ENST00000607494 J3QL48 77 aa12.7□□□□□ -0.38
LINC00458-206ENST00000607494 AVPP01185 164 aa12.69□□□□□ -0.38
LINC00458-206ENST00000607494 SMPD1P17405 629 aa12.69□□□□□ -0.38
LINC00458-206ENST00000607494 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
LINC00458-206ENST00000607494 CRIPAKQ8N1N5 446 aa12.67□□□□□ -0.38
LINC00458-206ENST00000607494 SNIP1Q8TAD8 396 aaKnown RBP12.67□□□□□ -0.38
LINC00458-206ENST00000607494 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
LINC00458-206ENST00000607494 AXIN1O15169 862 aa12.65□□□□□ -0.38
LINC00458-206ENST00000607494 PRR7Q8TB68 274 aa12.65□□□□□ -0.38
LINC00458-206ENST00000607494 AK7Q96M32 723 aa12.65□□□□□ -0.38
LINC00458-206ENST00000607494 GMPR2Q9P2T1 348 aaKnown RBP12.64□□□□□ -0.39
LINC00458-206ENST00000607494 CCNYL3P0C7X3 344 aa12.63□□□□□ -0.39
LINC00458-206ENST00000607494 WNT7BP56706 349 aa12.63□□□□□ -0.39
LINC00458-206ENST00000607494 MTMR2Q13614 643 aa12.63□□□□□ -0.39
LINC00458-206ENST00000607494 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
LINC00458-206ENST00000607494 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
LINC00458-206ENST00000607494 HPS1Q92902 700 aa12.61□□□□□ -0.39
LINC00458-206ENST00000607494 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
LINC00458-206ENST00000607494 PTPRNQ16849 979 aa12.6□□□□□ -0.39
LINC00458-206ENST00000607494 CTC1Q2NKJ3 1217 aa12.6□□□□□ -0.39
LINC00458-206ENST00000607494 LINC01559Q495D7 138 aa12.6□□□□□ -0.39
LINC00458-206ENST00000607494 SMCPP49901 116 aaPredicted RBP12.59□□□□□ -0.39
LINC00458-206ENST00000607494 PDE4DQ08499 809 aa12.59□□□□□ -0.39
LINC00458-206ENST00000607494 SH3BP2P78314 561 aa12.58□□□□□ -0.4
LINC00458-206ENST00000607494 UNC93B1Q9H1C4 597 aa12.58□□□□□ -0.4
LINC00458-206ENST00000607494 CFAP99D6REC4 459 aa12.57□□□□□ -0.4
LINC00458-206ENST00000607494 ALDH1A1P00352 501 aa12.57□□□□□ -0.4
LINC00458-206ENST00000607494 CSPP1Q1MSJ5 1256 aa12.57□□□□□ -0.4
LINC00458-206ENST00000607494 CABLES1Q8TDN4 633 aa12.57□□□□□ -0.4
LINC00458-206ENST00000607494 EHBP1Q8NDI1 1231 aa12.56□□□□□ -0.4
LINC00458-206ENST00000607494 EVA1BQ9NVM1 165 aa12.56□□□□□ -0.4
LINC00458-206ENST00000607494 SPTLC1O15269 473 aa12.55□□□□□ -0.4
LINC00458-206ENST00000607494 HRCP23327 699 aa12.55□□□□□ -0.4
LINC00458-206ENST00000607494 SIAH2O43255 324 aa12.54□□□□□ -0.4
LINC00458-206ENST00000607494 KCNH2Q12809 1159 aa12.54□□□□□ -0.4
LINC00458-206ENST00000607494 BAP1Q92560 729 aa12.54□□□□□ -0.4
LINC00458-206ENST00000607494 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
LINC00458-206ENST00000607494 C11orf95C9JLR9 678 aaPredicted RBP12.53□□□□□ -0.4
LINC00458-206ENST00000607494 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
LINC00458-206ENST00000607494 ATP13A2Q9NQ11 1180 aa12.53□□□□□ -0.4
LINC00458-206ENST00000607494 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.41
LINC00458-206ENST00000607494 TLL2Q9Y6L7 1015 aa12.52□□□□□ -0.41
LINC00458-206ENST00000607494 GJA5P36382 358 aa12.51□□□□□ -0.41
LINC00458-206ENST00000607494 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
LINC00458-206ENST00000607494 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
LINC00458-206ENST00000607494 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
LINC00458-206ENST00000607494 ZBTB3Q9H5J0 574 aa12.51□□□□□ -0.41
LINC00458-206ENST00000607494 MAP10Q9P2G4 905 aa12.51□□□□□ -0.41
LINC00458-206ENST00000607494 CTHP32929 405 aa12.5□□□□□ -0.41
LINC00458-206ENST00000607494 QPCTQ16769 361 aa12.5□□□□□ -0.41
LINC00458-206ENST00000607494 LYPD8Q6UX82 237 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms