RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 MSS51Q4VC12 460 aa9.78□□□□□ -0.84
RNU4-89P-201ENST00000607443 MRGPRX2Q96LB1 330 aa9.78□□□□□ -0.84
RNU4-89P-201ENST00000607443 DDX11L8A8MPP1 907 aa9.77□□□□□ -0.85
RNU4-89P-201ENST00000607443 FECHP22830 423 aa9.76□□□□□ -0.85
RNU4-89P-201ENST00000607443 TRIM32Q13049 653 aa9.76□□□□□ -0.85
RNU4-89P-201ENST00000607443 KIFC2Q96AC6 838 aa9.76□□□□□ -0.85
RNU4-89P-201ENST00000607443 HPS1Q92902 700 aa9.75□□□□□ -0.85
RNU4-89P-201ENST00000607443 RNF19BQ6ZMZ0 732 aa9.74□□□□□ -0.85
RNU4-89P-201ENST00000607443 FAM181BA6NEQ2 426 aa9.73□□□□□ -0.85
RNU4-89P-201ENST00000607443 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
RNU4-89P-201ENST00000607443 SEMA3EO15041 775 aa9.71□□□□□ -0.86
RNU4-89P-201ENST00000607443 MMP16P51512 607 aa9.71□□□□□ -0.86
RNU4-89P-201ENST00000607443 SULF1Q8IWU6 871 aa9.71□□□□□ -0.86
RNU4-89P-201ENST00000607443 NLRP7Q8WX94 980 aa9.71□□□□□ -0.86
RNU4-89P-201ENST00000607443 LOC100996750A0A140TA64 210 aa9.7□□□□□ -0.86
RNU4-89P-201ENST00000607443 REPIN1Q9BWE0 567 aaKnown RBP9.7□□□□□ -0.86
RNU4-89P-201ENST00000607443 KRTAP4-6Q9BYQ5 205 aa9.7□□□□□ -0.86
RNU4-89P-201ENST00000607443 TSHZ2Q9NRE2 1034 aa9.7□□□□□ -0.86
RNU4-89P-201ENST00000607443 GNPATO15228 680 aa9.69□□□□□ -0.86
RNU4-89P-201ENST00000607443 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
RNU4-89P-201ENST00000607443 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
RNU4-89P-201ENST00000607443 NXF1Q9UBU9 619 aaKnown RBP9.68□□□□□ -0.86
RNU4-89P-201ENST00000607443 GMPRP36959 345 aa9.67□□□□□ -0.86
RNU4-89P-201ENST00000607443 Q3C1V9 767 aa9.67□□□□□ -0.86
RNU4-89P-201ENST00000607443 RC3H1Q5TC82 1133 aaKnown RBP9.67□□□□□ -0.86
RNU4-89P-201ENST00000607443 ZSCAN1Q8NBB4 408 aa9.66□□□□□ -0.86
RNU4-89P-201ENST00000607443 PHOX2BQ99453 314 aa9.66□□□□□ -0.86
RNU4-89P-201ENST00000607443 RBM26Q5T8P6 1007 aaKnown RBP9.65□□□□□ -0.86
RNU4-89P-201ENST00000607443 DXOO77932 396 aaKnown RBP9.64□□□□□ -0.87
RNU4-89P-201ENST00000607443 SKOR1P84550 965 aa9.64□□□□□ -0.87
RNU4-89P-201ENST00000607443 NPAS3Q8IXF0 933 aa9.64□□□□□ -0.87
RNU4-89P-201ENST00000607443 USB1Q9BQ65 265 aaKnown RBP9.64□□□□□ -0.87
RNU4-89P-201ENST00000607443 WNT7BP56706 349 aa9.63□□□□□ -0.87
RNU4-89P-201ENST00000607443 IRF7Q92985 503 aa9.63□□□□□ -0.87
RNU4-89P-201ENST00000607443 P3H3Q8IVL6 736 aa9.62□□□□□ -0.87
RNU4-89P-201ENST00000607443 GPR37O15354 613 aa9.61□□□□□ -0.87
RNU4-89P-201ENST00000607443 ALDH1A1P00352 501 aa9.61□□□□□ -0.87
RNU4-89P-201ENST00000607443 CCDC24Q8N4L8 307 aa9.61□□□□□ -0.87
RNU4-89P-201ENST00000607443 TRIM46Q7Z4K8 759 aa9.59□□□□□ -0.87
RNU4-89P-201ENST00000607443 TESPA1A2RU30 521 aaPredicted RBP9.58□□□□□ -0.88
RNU4-89P-201ENST00000607443 H3BM21 787 aa9.58□□□□□ -0.88
RNU4-89P-201ENST00000607443 VEGFBP49765 207 aa9.58□□□□□ -0.88
RNU4-89P-201ENST00000607443 SIAH2O43255 324 aa9.57□□□□□ -0.88
RNU4-89P-201ENST00000607443 BMP1P13497 986 aa9.57□□□□□ -0.88
RNU4-89P-201ENST00000607443 SMYD5Q6GMV2 418 aa9.57□□□□□ -0.88
RNU4-89P-201ENST00000607443 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
RNU4-89P-201ENST00000607443 ERBB4Q15303 1308 aa9.56□□□□□ -0.88
RNU4-89P-201ENST00000607443 KDM4AO75164 1064 aa9.55□□□□□ -0.88
RNU4-89P-201ENST00000607443 CD46P15529 392 aa9.55□□□□□ -0.88
RNU4-89P-201ENST00000607443 AMER1Q5JTC6 1135 aaPredicted RBP9.52□□□□□ -0.89
RNU4-89P-201ENST00000607443 HLA-CQ95604 372 aa9.52□□□□□ -0.89
RNU4-89P-201ENST00000607443 WASF2Q9Y6W5 498 aa9.52□□□□□ -0.89
RNU4-89P-201ENST00000607443 SUZ12Q15022 739 aaKnown RBP9.51□□□□□ -0.89
RNU4-89P-201ENST00000607443 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
RNU4-89P-201ENST00000607443 JUNDP17535 347 aa9.5□□□□□ -0.89
RNU4-89P-201ENST00000607443 USP46P62068 366 aa9.5□□□□□ -0.89
RNU4-89P-201ENST00000607443 PTCRAQ6ISU1 281 aaPredicted RBP9.5□□□□□ -0.89
RNU4-89P-201ENST00000607443 ZFP42Q96MM3 310 aa9.49□□□□□ -0.89
RNU4-89P-201ENST00000607443 HOXA2O43364 376 aa9.46□□□□□ -0.9
RNU4-89P-201ENST00000607443 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
RNU4-89P-201ENST00000607443 NUDT12Q9BQG2 462 aa9.46□□□□□ -0.9
RNU4-89P-201ENST00000607443 SH3BP2P78314 561 aa9.44□□□□□ -0.9
RNU4-89P-201ENST00000607443 GUCA2AQ02747 115 aa9.44□□□□□ -0.9
RNU4-89P-201ENST00000607443 RTN4Q9NQC3 1192 aaKnown RBP9.44□□□□□ -0.9
RNU4-89P-201ENST00000607443 VSIG8P0DPA2 414 aa9.42□□□□□ -0.9
RNU4-89P-201ENST00000607443 KCNMA1Q12791 1236 aa9.42□□□□□ -0.9
RNU4-89P-201ENST00000607443 GPIHBP1Q8IV16 184 aa9.42□□□□□ -0.9
RNU4-89P-201ENST00000607443 MRPL14Q6P1L8 145 aaKnown RBP9.41□□□□□ -0.9
RNU4-89P-201ENST00000607443 RETREG3Q86VR2 466 aa9.41□□□□□ -0.9
RNU4-89P-201ENST00000607443 GSK3AP49840 483 aa9.39□□□□□ -0.91
RNU4-89P-201ENST00000607443 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
RNU4-89P-201ENST00000607443 SCARF1Q14162 830 aa9.39□□□□□ -0.91
RNU4-89P-201ENST00000607443 KCTD17Q8N5Z5 321 aa9.39□□□□□ -0.91
RNU4-89P-201ENST00000607443 MPNDQ8N594 471 aa9.38□□□□□ -0.91
RNU4-89P-201ENST00000607443 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
RNU4-89P-201ENST00000607443 PLEKHG3A1L390 1219 aa9.37□□□□□ -0.91
RNU4-89P-201ENST00000607443 SOBPA7XYQ1 873 aa9.37□□□□□ -0.91
RNU4-89P-201ENST00000607443 CCNYL3P0C7X3 344 aa9.37□□□□□ -0.91
RNU4-89P-201ENST00000607443 MAP2K5Q13163 448 aa9.37□□□□□ -0.91
RNU4-89P-201ENST00000607443 NNTQ13423 1086 aa9.37□□□□□ -0.91
RNU4-89P-201ENST00000607443 TLL2Q9Y6L7 1015 aa9.37□□□□□ -0.91
RNU4-89P-201ENST00000607443 MS4A1P11836 297 aa9.36□□□□□ -0.91
RNU4-89P-201ENST00000607443 BAP1Q92560 729 aa9.36□□□□□ -0.91
RNU4-89P-201ENST00000607443 IRF6O14896 467 aa9.35□□□□□ -0.91
RNU4-89P-201ENST00000607443 TIMP2P16035 220 aa9.35□□□□□ -0.91
RNU4-89P-201ENST00000607443 VARSP26640 1264 aaKnown RBP9.35□□□□□ -0.91
RNU4-89P-201ENST00000607443 UNC93B1Q9H1C4 597 aa9.35□□□□□ -0.91
RNU4-89P-201ENST00000607443 EVA1BQ9NVM1 165 aa9.35□□□□□ -0.91
RNU4-89P-201ENST00000607443 LINC01559Q495D7 138 aa9.34□□□□□ -0.91
RNU4-89P-201ENST00000607443 KLF16Q9BXK1 252 aaPredicted RBP9.34□□□□□ -0.91
RNU4-89P-201ENST00000607443 ADH1CP00326 375 aa9.33□□□□□ -0.92
RNU4-89P-201ENST00000607443 WDR4P57081 412 aaKnown RBP9.33□□□□□ -0.92
RNU4-89P-201ENST00000607443 PCDHGC3Q9UN70 934 aa9.33□□□□□ -0.92
RNU4-89P-201ENST00000607443 C6orf229H3BNL8 230 aa9.32□□□□□ -0.92
RNU4-89P-201ENST00000607443 PTPRNQ16849 979 aa9.32□□□□□ -0.92
RNU4-89P-201ENST00000607443 NUTM1Q86Y26 1132 aa9.32□□□□□ -0.92
RNU4-89P-201ENST00000607443 ZNF511Q8NB15 262 aa9.32□□□□□ -0.92
RNU4-89P-201ENST00000607443 FDX1P10109 184 aa9.31□□□□□ -0.92
RNU4-89P-201ENST00000607443 KCNH2Q12809 1159 aa9.31□□□□□ -0.92
RNU4-89P-201ENST00000607443 TMEM151AQ8N4L1 468 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms