RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 BRICD5Q6PL45 260 aa6.6□□□□□ -1.35
HMGB1P50-201ENST00000605814 KRI1Q8N9T8 703 aaKnown RBP6.6□□□□□ -1.35
HMGB1P50-201ENST00000605814 PHOX2BQ99453 314 aa6.6□□□□□ -1.35
HMGB1P50-201ENST00000605814 KDM4AO75164 1064 aa6.59□□□□□ -1.35
HMGB1P50-201ENST00000605814 MAP2K5Q13163 448 aa6.59□□□□□ -1.35
HMGB1P50-201ENST00000605814 TOR4AQ9NXH8 423 aa6.59□□□□□ -1.35
HMGB1P50-201ENST00000605814 MDM2Q00987 491 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P50-201ENST00000605814 TRIM32Q13049 653 aa6.58□□□□□ -1.36
HMGB1P50-201ENST00000605814 CRIPAKQ8N1N5 446 aa6.58□□□□□ -1.36
HMGB1P50-201ENST00000605814 USB1Q9BQ65 265 aaKnown RBP6.58□□□□□ -1.36
HMGB1P50-201ENST00000605814 REPIN1Q9BWE0 567 aaKnown RBP6.58□□□□□ -1.36
HMGB1P50-201ENST00000605814 TTBK1Q5TCY1 1321 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P50-201ENST00000605814 CD46P15529 392 aa6.57□□□□□ -1.36
HMGB1P50-201ENST00000605814 USP46P62068 366 aa6.57□□□□□ -1.36
HMGB1P50-201ENST00000605814 SNIP1Q8TAD8 396 aaKnown RBP6.57□□□□□ -1.36
HMGB1P50-201ENST00000605814 GMPR2Q9P2T1 348 aaKnown RBP6.57□□□□□ -1.36
HMGB1P50-201ENST00000605814 WNT7AO00755 349 aa6.56□□□□□ -1.36
HMGB1P50-201ENST00000605814 AVPP01185 164 aa6.56□□□□□ -1.36
HMGB1P50-201ENST00000605814 TREML4Q6UXN2 200 aa6.55□□□□□ -1.36
HMGB1P50-201ENST00000605814 NUTM1Q86Y26 1132 aa6.55□□□□□ -1.36
HMGB1P50-201ENST00000605814 DACH1Q9UI36 760 aa6.55□□□□□ -1.36
HMGB1P50-201ENST00000605814 WFS1O76024 890 aa6.54□□□□□ -1.36
HMGB1P50-201ENST00000605814 MMP16P51512 607 aa6.54□□□□□ -1.36
HMGB1P50-201ENST00000605814 MRGPRX2Q96LB1 330 aa6.54□□□□□ -1.36
HMGB1P50-201ENST00000605814 IRF6O14896 467 aa6.53□□□□□ -1.36
HMGB1P50-201ENST00000605814 SMCPP49901 116 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P50-201ENST00000605814 SENP2Q9HC62 589 aa6.53□□□□□ -1.36
HMGB1P50-201ENST00000605814 MINK1Q8N4C8 1332 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P50-201ENST00000605814 HOXA2O43364 376 aa6.52□□□□□ -1.37
HMGB1P50-201ENST00000605814 DXOO77932 396 aaKnown RBP6.52□□□□□ -1.37
HMGB1P50-201ENST00000605814 CLCN1P35523 988 aa6.52□□□□□ -1.37
HMGB1P50-201ENST00000605814 CCDC102AQ96A19 550 aa6.52□□□□□ -1.37
HMGB1P50-201ENST00000605814 GPCPD1Q9NPB8 672 aa6.52□□□□□ -1.37
HMGB1P50-201ENST00000605814 J3QL48 77 aa6.51□□□□□ -1.37
HMGB1P50-201ENST00000605814 SMPD1P17405 629 aa6.51□□□□□ -1.37
HMGB1P50-201ENST00000605814 WNT7BP56706 349 aa6.51□□□□□ -1.37
HMGB1P50-201ENST00000605814 HLA-CQ95604 372 aa6.51□□□□□ -1.37
HMGB1P50-201ENST00000605814 ATP13A2Q9NQ11 1180 aa6.51□□□□□ -1.37
HMGB1P50-201ENST00000605814 C6orf229H3BNL8 230 aa6.5□□□□□ -1.37
HMGB1P50-201ENST00000605814 ALDH1A1P00352 501 aa6.5□□□□□ -1.37
HMGB1P50-201ENST00000605814 JUNDP17535 347 aa6.5□□□□□ -1.37
HMGB1P50-201ENST00000605814 GUCA2AQ02747 115 aa6.5□□□□□ -1.37
HMGB1P50-201ENST00000605814 RC3H1Q5TC82 1133 aaKnown RBP6.5□□□□□ -1.37
HMGB1P50-201ENST00000605814 EHBP1Q8NDI1 1231 aa6.5□□□□□ -1.37
HMGB1P50-201ENST00000605814 KIFC2Q96AC6 838 aa6.5□□□□□ -1.37
HMGB1P50-201ENST00000605814 WASF2Q9Y6W5 498 aa6.5□□□□□ -1.37
HMGB1P50-201ENST00000605814 NUDT12Q9BQG2 462 aa6.49□□□□□ -1.37
HMGB1P50-201ENST00000605814 ZEB1P37275 1124 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P50-201ENST00000605814 INSM1Q01101 510 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P50-201ENST00000605814 RETREG3Q86VR2 466 aa6.48□□□□□ -1.37
HMGB1P50-201ENST00000605814 HPS1Q92902 700 aa6.48□□□□□ -1.37
HMGB1P50-201ENST00000605814 TTLL12Q14166 644 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P50-201ENST00000605814 SYMPKQ92797 1274 aaKnown RBP6.47□□□□□ -1.37
HMGB1P50-201ENST00000605814 TRIM47Q96LD4 638 aa6.47□□□□□ -1.37
HMGB1P50-201ENST00000605814 FAM217BQ9NTX9 383 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P50-201ENST00000605814 KDM2AQ9Y2K7 1162 aa6.47□□□□□ -1.37
HMGB1P50-201ENST00000605814 DCAF1Q9Y4B6 1507 aa6.46□□□□□ -1.37
HMGB1P50-201ENST00000605814 FDX1P10109 184 aa6.46□□□□□ -1.38
HMGB1P50-201ENST00000605814 MS4A1P11836 297 aa6.46□□□□□ -1.38
HMGB1P50-201ENST00000605814 VSIG10Q8N0Z9 540 aa6.46□□□□□ -1.38
HMGB1P50-201ENST00000605814 SNRPBP14678 240 aaKnown RBP6.45□□□□□ -1.38
HMGB1P50-201ENST00000605814 SKOR1P84550 965 aa6.45□□□□□ -1.38
HMGB1P50-201ENST00000605814 SLC16A10Q8TF71 515 aa6.45□□□□□ -1.38
HMGB1P50-201ENST00000605814 CCNYL3P0C7X3 344 aa6.44□□□□□ -1.38
HMGB1P50-201ENST00000605814 STK17AQ9UEE5 414 aa6.44□□□□□ -1.38
HMGB1P50-201ENST00000605814 TERTO14746 1132 aaKnown RBP6.43□□□□□ -1.38
HMGB1P50-201ENST00000605814 NFX1Q12986 1120 aaKnown RBP6.43□□□□□ -1.38
HMGB1P50-201ENST00000605814 PPARGC1BQ86YN6 1023 aaKnown RBP6.43□□□□□ -1.38
HMGB1P50-201ENST00000605814 PCGF6Q9BYE7 350 aa6.43□□□□□ -1.38
HMGB1P50-201ENST00000605814 CAPN5O15484 640 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P50-201ENST00000605814 SSTR3P32745 418 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P50-201ENST00000605814 PTPRNQ16849 979 aa6.41□□□□□ -1.38
HMGB1P50-201ENST00000605814 LINC01559Q495D7 138 aa6.41□□□□□ -1.38
HMGB1P50-201ENST00000605814 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P50-201ENST00000605814 UNC93B1Q9H1C4 597 aa6.41□□□□□ -1.38
HMGB1P50-201ENST00000605814 PLEKHG3A1L390 1219 aa6.4□□□□□ -1.38
HMGB1P50-201ENST00000605814 FAM181BA6NEQ2 426 aa6.4□□□□□ -1.38
HMGB1P50-201ENST00000605814 BMP1P13497 986 aa6.4□□□□□ -1.38
HMGB1P50-201ENST00000605814 MTMR2Q13614 643 aa6.4□□□□□ -1.38
HMGB1P50-201ENST00000605814 PTCRAQ6ISU1 281 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P50-201ENST00000605814 WIPF1O43516 503 aa6.39□□□□□ -1.39
HMGB1P50-201ENST00000605814 CTHP32929 405 aa6.39□□□□□ -1.39
HMGB1P50-201ENST00000605814 SH3BP2P78314 561 aa6.39□□□□□ -1.39
HMGB1P50-201ENST00000605814 PRR7Q8TB68 274 aa6.39□□□□□ -1.39
HMGB1P50-201ENST00000605814 SPIRE2Q8WWL2 714 aa6.39□□□□□ -1.39
HMGB1P50-201ENST00000605814 PCDHGC3Q9UN70 934 aa6.39□□□□□ -1.39
HMGB1P50-201ENST00000605814 SPDYE5A6NIY4 337 aa6.38□□□□□ -1.39
HMGB1P50-201ENST00000605814 NDUFV2P19404 249 aa6.38□□□□□ -1.39
HMGB1P50-201ENST00000605814 BAP1Q92560 729 aa6.38□□□□□ -1.39
HMGB1P50-201ENST00000605814 NXF1Q9UBU9 619 aaKnown RBP6.38□□□□□ -1.39
HMGB1P50-201ENST00000605814 TLL2Q9Y6L7 1015 aa6.38□□□□□ -1.39
HMGB1P50-201ENST00000605814 CCDC180Q9P1Z9 1646 aa6.37□□□□□ -1.39
HMGB1P50-201ENST00000605814 MOXD2PA6NHM9 499 aa6.37□□□□□ -1.39
HMGB1P50-201ENST00000605814 KCNH2Q12809 1159 aa6.37□□□□□ -1.39
HMGB1P50-201ENST00000605814 TRIM26Q12899 539 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P50-201ENST00000605814 SCARF1Q14162 830 aa6.37□□□□□ -1.39
HMGB1P50-201ENST00000605814 AGERQ15109 404 aa6.37□□□□□ -1.39
HMGB1P50-201ENST00000605814 DIXDC1Q155Q3 683 aa6.37□□□□□ -1.39
HMGB1P50-201ENST00000605814 ZNF511Q8NB15 262 aa6.37□□□□□ -1.39
HMGB1P50-201ENST00000605814 IRF7Q92985 503 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms