RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 NEUROD1Q13562 356 aa8.27□□□□□ -1.09
HCG18-243ENST00000602498 DCCP43146 1447 aa8.27□□□□□ -1.09
HCG18-243ENST00000602498 YTHDC2Q9H6S0 1430 aaKnown RBP8.27□□□□□ -1.09
HCG18-243ENST00000602498 SPATA31A6Q5VVP1 1343 aa8.27□□□□□ -1.09
HCG18-243ENST00000602498 MINK1Q8N4C8 1332 aaPredicted RBP8.27□□□□□ -1.09
HCG18-243ENST00000602498 ABCC11Q96J66 1382 aa8.26□□□□□ -1.09
HCG18-243ENST00000602498 LMOD2Q6P5Q4 547 aa8.26□□□□□ -1.09
HCG18-243ENST00000602498 PMFBP1Q8TBY8 1022 aa8.26□□□□□ -1.09
HCG18-243ENST00000602498 SIN3AQ96ST3 1273 aa8.26□□□□□ -1.09
HCG18-243ENST00000602498 AFF2P51816 1311 aa8.26□□□□□ -1.09
HCG18-243ENST00000602498 XRN1Q8IZH2 1706 aaKnown RBP8.26□□□□□ -1.09
HCG18-243ENST00000602498 DHX57Q6P158 1386 aaKnown RBP8.25□□□□□ -1.09
HCG18-243ENST00000602498 PNPLA6Q8IY17 1366 aa8.25□□□□□ -1.09
HCG18-243ENST00000602498 CHD2O14647 1828 aaKnown RBP8.25□□□□□ -1.09
HCG18-243ENST00000602498 NGLY1Q96IV0 654 aa8.25□□□□□ -1.09
HCG18-243ENST00000602498 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.25□□□□□ -1.09
HCG18-243ENST00000602498 ACIN1Q9UKV3 1341 aaKnown RBP8.25□□□□□ -1.09
HCG18-243ENST00000602498 HRCP23327 699 aa8.24□□□□□ -1.09
HCG18-243ENST00000602498 ZNF772Q68DY9 489 aaPredicted RBP8.24□□□□□ -1.09
HCG18-243ENST00000602498 SOS2Q07890 1332 aaPredicted RBP8.24□□□□□ -1.09
HCG18-243ENST00000602498 COL16A1Q07092 1604 aaPredicted RBP8.23□□□□□ -1.09
HCG18-243ENST00000602498 NBPF1Q3BBV0 1214 aa8.23□□□□□ -1.09
HCG18-243ENST00000602498 KRT28Q7Z3Y7 464 aa8.23□□□□□ -1.09
HCG18-243ENST00000602498 CABLES1Q8TDN4 633 aa8.23□□□□□ -1.09
HCG18-243ENST00000602498 PHF8Q9UPP1 1060 aa8.23□□□□□ -1.09
HCG18-243ENST00000602498 AHDC1Q5TGY3 1603 aaPredicted RBP8.22□□□□□ -1.09
HCG18-243ENST00000602498 TECPR2O15040 1411 aa8.22□□□□□ -1.09
HCG18-243ENST00000602498 RXRBP28702 533 aa8.22□□□□□ -1.09
HCG18-243ENST00000602498 QTRT2Q9H974 415 aaKnown RBP8.22□□□□□ -1.09
HCG18-243ENST00000602498 PHLPP1O60346 1717 aa8.22□□□□□ -1.09
HCG18-243ENST00000602498 NPHP3Q7Z494 1330 aa8.22□□□□□ -1.09
HCG18-243ENST00000602498 MYOM2P54296 1465 aa8.21□□□□□ -1.09
HCG18-243ENST00000602498 NRXN1Q9ULB1 1477 aa8.21□□□□□ -1.09
HCG18-243ENST00000602498 HAP1P54257 671 aaPredicted RBP8.21□□□□□ -1.1
HCG18-243ENST00000602498 PSME1Q06323 249 aa8.21□□□□□ -1.1
HCG18-243ENST00000602498 L3MBTL2Q969R5 705 aa8.21□□□□□ -1.1
HCG18-243ENST00000602498 USP21Q9UK80 565 aa8.21□□□□□ -1.1
HCG18-243ENST00000602498 KIF1BO60333 1816 aa8.2□□□□□ -1.1
HCG18-243ENST00000602498 SIRT1Q96EB6 747 aa8.2□□□□□ -1.1
HCG18-243ENST00000602498 PRR36Q9H6K5 1346 aa8.2□□□□□ -1.1
HCG18-243ENST00000602498 PRAG1Q86YV5 1406 aa8.2□□□□□ -1.1
HCG18-243ENST00000602498 WASLO00401 505 aaPredicted RBP8.19□□□□□ -1.1
HCG18-243ENST00000602498 MSH5O43196 834 aa8.19□□□□□ -1.1
HCG18-243ENST00000602498 PAK3O75914 559 aaPredicted RBP8.19□□□□□ -1.1
HCG18-243ENST00000602498 NUTM2GQ5VZR2 741 aa8.19□□□□□ -1.1
HCG18-243ENST00000602498 NALCNQ8IZF0 1738 aa8.19□□□□□ -1.1
HCG18-243ENST00000602498 PPLO60437 1756 aa8.18□□□□□ -1.1
HCG18-243ENST00000602498 NGDNQ8NEJ9 315 aaKnown RBP8.18□□□□□ -1.1
HCG18-243ENST00000602498 CDK19Q9BWU1 502 aa8.18□□□□□ -1.1
HCG18-243ENST00000602498 SPATA31A3Q5VYP0 1347 aa8.18□□□□□ -1.1
HCG18-243ENST00000602498 SETD1AO15047 1707 aaKnown RBP8.17□□□□□ -1.1
HCG18-243ENST00000602498 NUDT16Q96DE0 195 aaKnown RBP8.17□□□□□ -1.1
HCG18-243ENST00000602498 CABP2Q9NPB3 220 aa8.17□□□□□ -1.1
HCG18-243ENST00000602498 ADGRB1O14514 1584 aa8.16□□□□□ -1.1
HCG18-243ENST00000602498 RBM6P78332 1123 aaKnown RBP8.16□□□□□ -1.1
HCG18-243ENST00000602498 SRPK2P78362 688 aaKnown RBP8.16□□□□□ -1.1
HCG18-243ENST00000602498 PXDNQ92626 1479 aa8.16□□□□□ -1.1
HCG18-243ENST00000602498 CCDC9Q9Y3X0 531 aaKnown RBP8.16□□□□□ -1.1
HCG18-243ENST00000602498 CDC42BPGQ6DT37 1551 aa8.15□□□□□ -1.1
HCG18-243ENST00000602498 NBPF8Q3BBV2 869 aa8.15□□□□□ -1.1
HCG18-243ENST00000602498 FNBP4Q8N3X1 1017 aaPredicted RBP8.15□□□□□ -1.1
HCG18-243ENST00000602498 UPF1Q92900 1129 aaKnown RBP eCLIP8.15□□□□□ -1.1
HCG18-243ENST00000602498 STAC3Q96MF2 364 aa8.15□□□□□ -1.1
HCG18-243ENST00000602498 TRPC5Q9UL62 973 aaPredicted RBP8.15□□□□□ -1.1
HCG18-243ENST00000602498 GPRASP1Q5JY77 1395 aa8.14□□□□□ -1.11
HCG18-243ENST00000602498 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
HCG18-243ENST00000602498 TRIM26Q12899 539 aaPredicted RBP8.14□□□□□ -1.11
HCG18-243ENST00000602498 RGS12O14924 1447 aa8.13□□□□□ -1.11
HCG18-243ENST00000602498 TNS3Q68CZ2 1445 aa8.13□□□□□ -1.11
HCG18-243ENST00000602498 CENPJQ9HC77 1338 aaPredicted RBP8.13□□□□□ -1.11
HCG18-243ENST00000602498 A0A0G2JS52 829 aa8.13□□□□□ -1.11
HCG18-243ENST00000602498 FAM83GA6ND36 823 aa8.13□□□□□ -1.11
HCG18-243ENST00000602498 MYT1Q01538 1121 aa8.13□□□□□ -1.11
HCG18-243ENST00000602498 UNC5CLQ8IV45 518 aa8.13□□□□□ -1.11
HCG18-243ENST00000602498 DLC1Q96QB1 1528 aa8.13□□□□□ -1.11
HCG18-243ENST00000602498 NHSL1Q5SYE7 1610 aa8.12□□□□□ -1.11
HCG18-243ENST00000602498 ZC3H6P61129 1189 aaKnown RBP8.12□□□□□ -1.11
HCG18-243ENST00000602498 CHRNA2Q15822 529 aa8.12□□□□□ -1.11
HCG18-243ENST00000602498 GJD4Q96KN9 370 aaPredicted RBP8.12□□□□□ -1.11
HCG18-243ENST00000602498 BCL9LQ86UU0 1499 aa8.12□□□□□ -1.11
HCG18-243ENST00000602498 ANKARQ7Z5J8 1434 aa8.12□□□□□ -1.11
HCG18-243ENST00000602498 SBNO1A3KN83 1393 aa8.11□□□□□ -1.11
HCG18-243ENST00000602498 ROCK2O75116 1388 aaKnown RBP8.11□□□□□ -1.11
HCG18-243ENST00000602498 ACEP12821 1306 aa8.11□□□□□ -1.11
HCG18-243ENST00000602498 PCGF6Q9BYE7 350 aa8.11□□□□□ -1.11
HCG18-243ENST00000602498 BTG4Q9NY30 223 aa8.11□□□□□ -1.11
HCG18-243ENST00000602498 CABP1Q9NZU7 370 aa8.11□□□□□ -1.11
HCG18-243ENST00000602498 CCDC61Q9Y6R9 512 aa8.11□□□□□ -1.11
HCG18-243ENST00000602498 IFT172Q9UG01 1749 aa8.11□□□□□ -1.11
HCG18-243ENST00000602498 SHPRHQ149N8 1683 aa8.11□□□□□ -1.11
HCG18-243ENST00000602498 SOX12O15370 315 aa8.1□□□□□ -1.11
HCG18-243ENST00000602498 ABTB2Q8N961 1025 aa8.1□□□□□ -1.11
HCG18-243ENST00000602498 PRDM11Q9NQV5 511 aa8.1□□□□□ -1.11
HCG18-243ENST00000602498 STRN4Q9NRL3 753 aa8.1□□□□□ -1.11
HCG18-243ENST00000602498 ATRNO75882 1429 aa8.1□□□□□ -1.11
HCG18-243ENST00000602498 ARHGEF10O15013 1369 aa8.1□□□□□ -1.11
HCG18-243ENST00000602498 EIF3AQ14152 1382 aaKnown RBP8.1□□□□□ -1.11
HCG18-243ENST00000602498 FAM98CQ17RN3 349 aaKnown RBP8.09□□□□□ -1.11
HCG18-243ENST00000602498 FAM182BQ5T319 152 aa8.09□□□□□ -1.11
HCG18-243ENST00000602498 SEPT12Q8IYM1 358 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms