RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 EIF3AQ14152 1382 aaKnown RBP29.1■■■□□ 2.25
SIN3B-211ENST00000601141 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.08■■■□□ 2.25
SIN3B-211ENST00000601141 CENPJQ9HC77 1338 aaPredicted RBP29.07■■■□□ 2.24
SIN3B-211ENST00000601141 ATF3P18847 181 aa29.06■■■□□ 2.24
SIN3B-211ENST00000601141 UBAP1LF5GYI3 381 aa29.05■■■□□ 2.24
SIN3B-211ENST00000601141 MINK1Q8N4C8 1332 aaPredicted RBP29.05■■■□□ 2.24
SIN3B-211ENST00000601141 DCCP43146 1447 aa29.03■■■□□ 2.24
SIN3B-211ENST00000601141 TOM1O60784 492 aa29.03■■■□□ 2.24
SIN3B-211ENST00000601141 CADPS2Q86UW7 1296 aa29.03■■■□□ 2.24
SIN3B-211ENST00000601141 HIRIP3Q9BW71 556 aaPredicted RBP29.03■■■□□ 2.24
SIN3B-211ENST00000601141 USP47Q96K76 1375 aa29.01■■■□□ 2.23
SIN3B-211ENST00000601141 QRICH2Q9H0J4 1663 aa29■■■□□ 2.23
SIN3B-211ENST00000601141 CDC42BPGQ6DT37 1551 aa29■■■□□ 2.23
SIN3B-211ENST00000601141 ADGRB2O60241 1585 aa28.97■■■□□ 2.23
SIN3B-211ENST00000601141 SCAF1Q9H7N4 1312 aaKnown RBP28.95■■■□□ 2.23
SIN3B-211ENST00000601141 ST20-MTHFSA0A0A6YYL1 179 aa28.94■■■□□ 2.22
SIN3B-211ENST00000601141 ZEB1P37275 1124 aaPredicted RBP28.94■■■□□ 2.22
SIN3B-211ENST00000601141 PIP4K2BP78356 416 aa28.94■■■□□ 2.22
SIN3B-211ENST00000601141 SLAIN2Q9P270 581 aa28.94■■■□□ 2.22
SIN3B-211ENST00000601141 MST1RQ04912 1400 aa28.93■■■□□ 2.22
SIN3B-211ENST00000601141 NUTM2FA1L443 756 aa28.92■■■□□ 2.22
SIN3B-211ENST00000601141 WASLO00401 505 aaPredicted RBP28.91■■■□□ 2.22
SIN3B-211ENST00000601141 FMN2Q9NZ56 1722 aa28.9■■■□□ 2.22
SIN3B-211ENST00000601141 EIF4G2P78344 907 aaKnown RBP eCLIP28.89■■■□□ 2.22
SIN3B-211ENST00000601141 SBNO2Q9Y2G9 1366 aa28.88■■■□□ 2.21
SIN3B-211ENST00000601141 C1orf167Q5SNV9 1468 aa28.88■■■□□ 2.21
SIN3B-211ENST00000601141 FBXO41Q8TF61 875 aa28.87■■■□□ 2.21
SIN3B-211ENST00000601141 CDK19Q9BWU1 502 aa28.87■■■□□ 2.21
SIN3B-211ENST00000601141 EVC2Q86UK5 1308 aa28.86■■■□□ 2.21
SIN3B-211ENST00000601141 TULP4Q9NRJ4 1543 aa28.86■■■□□ 2.21
SIN3B-211ENST00000601141 HSPA5P11021 654 aaKnown RBP28.85■■■□□ 2.21
SIN3B-211ENST00000601141 SRPK2P78362 688 aaKnown RBP28.85■■■□□ 2.21
SIN3B-211ENST00000601141 TESK2Q96S53 571 aa28.84■■■□□ 2.21
SIN3B-211ENST00000601141 ROBO1Q9Y6N7 1651 aa28.83■■■□□ 2.21
SIN3B-211ENST00000601141 ANKARQ7Z5J8 1434 aa28.82■■■□□ 2.2
SIN3B-211ENST00000601141 ESCO1Q5FWF5 840 aa28.81■■■□□ 2.2
SIN3B-211ENST00000601141 CABP2Q9NPB3 220 aa28.81■■■□□ 2.2
SIN3B-211ENST00000601141 BRINP3Q76B58 766 aa28.8■■■□□ 2.2
SIN3B-211ENST00000601141 ORAI2Q96SN7 254 aa28.8■■■□□ 2.2
SIN3B-211ENST00000601141 USP32Q8NFA0 1604 aa28.79■■■□□ 2.2
SIN3B-211ENST00000601141 PRR36Q9H6K5 1346 aa28.79■■■□□ 2.2
SIN3B-211ENST00000601141 SLC24A1O60721 1099 aa28.78■■■□□ 2.2
SIN3B-211ENST00000601141 NUDT16Q96DE0 195 aaKnown RBP28.78■■■□□ 2.2
SIN3B-211ENST00000601141 ATP7BP35670 1465 aa28.77■■■□□ 2.2
SIN3B-211ENST00000601141 RGPD8O14715 1765 aaPredicted RBP28.77■■■□□ 2.2
SIN3B-211ENST00000601141 TMF1P82094 1093 aa28.76■■■□□ 2.19
SIN3B-211ENST00000601141 DISP3Q9P2K9 1392 aa28.74■■■□□ 2.19
SIN3B-211ENST00000601141 PHF8Q9UPP1 1060 aa28.72■■■□□ 2.19
SIN3B-211ENST00000601141 CCDC61Q9Y6R9 512 aa28.72■■■□□ 2.19
SIN3B-211ENST00000601141 ITSN1Q15811 1721 aa28.71■■■□□ 2.19
SIN3B-211ENST00000601141 PMFBP1Q8TBY8 1022 aa28.71■■■□□ 2.19
SIN3B-211ENST00000601141 ATAD2Q6PL18 1390 aa28.7■■■□□ 2.19
SIN3B-211ENST00000601141 KIF1AQ12756 1690 aa28.69■■■□□ 2.18
SIN3B-211ENST00000601141 TOPAZ1Q8N9V7 1692 aa28.69■■■□□ 2.18
SIN3B-211ENST00000601141 PPIP5K1Q6PFW1 1433 aa28.69■■■□□ 2.18
SIN3B-211ENST00000601141 DDX17Q92841 729 aaKnown RBP28.68■■■□□ 2.18
SIN3B-211ENST00000601141 FOXO3O43524 673 aa28.67■■■□□ 2.18
SIN3B-211ENST00000601141 CDCA8Q53HL2 280 aa28.67■■■□□ 2.18
SIN3B-211ENST00000601141 AHDC1Q5TGY3 1603 aaPredicted RBP28.65■■■□□ 2.18
SIN3B-211ENST00000601141 NPHP3Q7Z494 1330 aa28.65■■■□□ 2.18
SIN3B-211ENST00000601141 HSPA1LP34931 641 aa28.65■■■□□ 2.18
SIN3B-211ENST00000601141 PUS7Q96PZ0 661 aaKnown RBP28.65■■■□□ 2.18
SIN3B-211ENST00000601141 NHSL1Q5SYE7 1610 aa28.64■■■□□ 2.18
SIN3B-211ENST00000601141 NGDNQ8NEJ9 315 aaKnown RBP28.64■■■□□ 2.17
SIN3B-211ENST00000601141 CABP1Q9NZU7 370 aa28.64■■■□□ 2.17
SIN3B-211ENST00000601141 PHLPP1O60346 1717 aa28.64■■■□□ 2.17
SIN3B-211ENST00000601141 ILDR1Q86SU0 546 aaPredicted RBP28.62■■■□□ 2.17
SIN3B-211ENST00000601141 TMC1Q8TDI8 760 aa28.62■■■□□ 2.17
SIN3B-211ENST00000601141 POLR3GLQ9BT43 218 aa28.62■■■□□ 2.17
SIN3B-211ENST00000601141 PLEKHG3A1L390 1219 aa28.61■■■□□ 2.17
SIN3B-211ENST00000601141 XPCQ01831 940 aaPredicted RBP28.61■■■□□ 2.17
SIN3B-211ENST00000601141 ACEP12821 1306 aa28.6■■■□□ 2.17
SIN3B-211ENST00000601141 PSME1Q06323 249 aa28.59■■■□□ 2.17
SIN3B-211ENST00000601141 POLR3AO14802 1390 aaPredicted RBP28.57■■■□□ 2.16
SIN3B-211ENST00000601141 COL16A1Q07092 1604 aaPredicted RBP28.57■■■□□ 2.16
SIN3B-211ENST00000601141 KRT28Q7Z3Y7 464 aa28.56■■■□□ 2.16
SIN3B-211ENST00000601141 SLC12A5Q9H2X9 1139 aa28.56■■■□□ 2.16
SIN3B-211ENST00000601141 PXDNQ92626 1479 aa28.56■■■□□ 2.16
SIN3B-211ENST00000601141 SOS2Q07890 1332 aaPredicted RBP28.56■■■□□ 2.16
SIN3B-211ENST00000601141 C11orf95C9JLR9 678 aaPredicted RBP28.55■■■□□ 2.16
SIN3B-211ENST00000601141 NINLQ9Y2I6 1382 aa28.54■■■□□ 2.16
SIN3B-211ENST00000601141 LRRC59Q96AG4 307 aaKnown RBP28.51■■■□□ 2.15
SIN3B-211ENST00000601141 KIF7Q2M1P5 1343 aa28.51■■■□□ 2.15
SIN3B-211ENST00000601141 HDGFL2Q7Z4V5 671 aaPredicted RBP28.5■■■□□ 2.15
SIN3B-211ENST00000601141 TERF2IPQ9NYB0 399 aa28.49■■■□□ 2.15
SIN3B-211ENST00000601141 PAK3O75914 559 aaPredicted RBP28.48■■■□□ 2.15
SIN3B-211ENST00000601141 ZNF692Q9BU19 519 aaPredicted RBP28.48■■■□□ 2.15
SIN3B-211ENST00000601141 MYOM1P52179 1685 aa28.48■■■□□ 2.15
SIN3B-211ENST00000601141 KTN1Q86UP2 1357 aaKnown RBP28.47■■■□□ 2.15
SIN3B-211ENST00000601141 USP6P35125 1406 aa28.47■■■□□ 2.15
SIN3B-211ENST00000601141 CPSF1Q10570 1443 aaKnown RBP28.47■■■□□ 2.15
SIN3B-211ENST00000601141 CD163L1Q9NR16 1453 aa28.47■■■□□ 2.15
SIN3B-211ENST00000601141 A0A1W2PP64 1363 aa28.46■■■□□ 2.15
SIN3B-211ENST00000601141 SBNO1A3KN83 1393 aa28.46■■■□□ 2.15
SIN3B-211ENST00000601141 AKAP12Q02952 1782 aa28.46■■■□□ 2.15
SIN3B-211ENST00000601141 LMOD2Q6P5Q4 547 aa28.46■■■□□ 2.15
SIN3B-211ENST00000601141 TNS3Q68CZ2 1445 aa28.45■■■□□ 2.15
SIN3B-211ENST00000601141 TRPM3Q9HCF6 1732 aaPredicted RBP28.45■■■□□ 2.15
SIN3B-211ENST00000601141 SPATA31A3Q5VYP0 1347 aa28.45■■■□□ 2.14
SIN3B-211ENST00000601141 ANKRD36BQ8N2N9 1353 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms