RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 CADPS2Q86UW7 1296 aa20.19■□□□□ 0.82
XRCC1-207ENST00000598165 TIMELESSQ9UNS1 1208 aa20.19■□□□□ 0.82
XRCC1-207ENST00000598165 NBPF8Q3BBV2 869 aa20.18■□□□□ 0.82
XRCC1-207ENST00000598165 PRAM1Q96QH2 718 aa20.17■□□□□ 0.82
XRCC1-207ENST00000598165 POGKQ9P215 609 aa20.17■□□□□ 0.82
XRCC1-207ENST00000598165 PLEKHH1Q9ULM0 1364 aa20.17■□□□□ 0.82
XRCC1-207ENST00000598165 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
XRCC1-207ENST00000598165 DCCP43146 1447 aa20.16■□□□□ 0.82
XRCC1-207ENST00000598165 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
XRCC1-207ENST00000598165 SLAIN2Q9P270 581 aa20.15■□□□□ 0.82
XRCC1-207ENST00000598165 ROBO1Q9Y6N7 1651 aa20.15■□□□□ 0.82
XRCC1-207ENST00000598165 ROCK2O75116 1388 aaKnown RBP20.14■□□□□ 0.81
XRCC1-207ENST00000598165 NALCNQ8IZF0 1738 aa20.13■□□□□ 0.81
XRCC1-207ENST00000598165 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
XRCC1-207ENST00000598165 SAFB2Q14151 953 aaKnown RBP eCLIP20.13■□□□□ 0.81
XRCC1-207ENST00000598165 POTEAQ6S8J7 498 aa20.1■□□□□ 0.81
XRCC1-207ENST00000598165 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.81
XRCC1-207ENST00000598165 RALGAPBQ86X10 1494 aa20.08■□□□□ 0.81
XRCC1-207ENST00000598165 MST1RQ04912 1400 aa20.08■□□□□ 0.8
XRCC1-207ENST00000598165 CARD11Q9BXL7 1154 aa20.07■□□□□ 0.8
XRCC1-207ENST00000598165 CDC42BPGQ6DT37 1551 aa20.07■□□□□ 0.8
XRCC1-207ENST00000598165 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
XRCC1-207ENST00000598165 MINK1Q8N4C8 1332 aaPredicted RBP20.06■□□□□ 0.8
XRCC1-207ENST00000598165 CENPJQ9HC77 1338 aaPredicted RBP20.04■□□□□ 0.8
XRCC1-207ENST00000598165 HIRIP3Q9BW71 556 aaPredicted RBP20.04■□□□□ 0.8
XRCC1-207ENST00000598165 C1orf167Q5SNV9 1468 aa20.04■□□□□ 0.8
XRCC1-207ENST00000598165 EIF3AQ14152 1382 aaKnown RBP20.03■□□□□ 0.8
XRCC1-207ENST00000598165 NUTM2FA1L443 756 aa20.02■□□□□ 0.8
XRCC1-207ENST00000598165 BRINP3Q76B58 766 aa20.02■□□□□ 0.8
XRCC1-207ENST00000598165 ADGRB2O60241 1585 aa20■□□□□ 0.79
XRCC1-207ENST00000598165 JCADQ9P266 1359 aa20■□□□□ 0.79
XRCC1-207ENST00000598165 PHLPP1O60346 1717 aa20■□□□□ 0.79
XRCC1-207ENST00000598165 WASLO00401 505 aaPredicted RBP19.99■□□□□ 0.79
XRCC1-207ENST00000598165 ORAI2Q96SN7 254 aa19.99■□□□□ 0.79
XRCC1-207ENST00000598165 ESCO1Q5FWF5 840 aa19.98■□□□□ 0.79
XRCC1-207ENST00000598165 FMN2Q9NZ56 1722 aa19.98■□□□□ 0.79
XRCC1-207ENST00000598165 COL16A1Q07092 1604 aaPredicted RBP19.98■□□□□ 0.79
XRCC1-207ENST00000598165 LRP6O75581 1613 aa19.95■□□□□ 0.78
XRCC1-207ENST00000598165 CDK19Q9BWU1 502 aa19.95■□□□□ 0.78
XRCC1-207ENST00000598165 ANKARQ7Z5J8 1434 aa19.94■□□□□ 0.78
XRCC1-207ENST00000598165 QRICH2Q9H0J4 1663 aa19.94■□□□□ 0.78
XRCC1-207ENST00000598165 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
XRCC1-207ENST00000598165 AHDC1Q5TGY3 1603 aaPredicted RBP19.92■□□□□ 0.78
XRCC1-207ENST00000598165 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
XRCC1-207ENST00000598165 DDX17Q92841 729 aaKnown RBP19.91■□□□□ 0.78
XRCC1-207ENST00000598165 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
XRCC1-207ENST00000598165 EVC2Q86UK5 1308 aa19.91■□□□□ 0.78
XRCC1-207ENST00000598165 PRR36Q9H6K5 1346 aa19.91■□□□□ 0.78
XRCC1-207ENST00000598165 NUDT16Q96DE0 195 aaKnown RBP19.9■□□□□ 0.78
XRCC1-207ENST00000598165 USP47Q96K76 1375 aa19.9■□□□□ 0.78
XRCC1-207ENST00000598165 ST20-MTHFSA0A0A6YYL1 179 aa19.89■□□□□ 0.77
XRCC1-207ENST00000598165 NPHP3Q7Z494 1330 aa19.89■□□□□ 0.77
XRCC1-207ENST00000598165 SBNO2Q9Y2G9 1366 aa19.89■□□□□ 0.77
XRCC1-207ENST00000598165 USP32Q8NFA0 1604 aa19.88■□□□□ 0.77
XRCC1-207ENST00000598165 SPATA31A6Q5VVP1 1343 aa19.88■□□□□ 0.77
XRCC1-207ENST00000598165 FOXO3O43524 673 aa19.88■□□□□ 0.77
XRCC1-207ENST00000598165 CABP2Q9NPB3 220 aa19.88■□□□□ 0.77
XRCC1-207ENST00000598165 NHSL1Q5SYE7 1610 aa19.87■□□□□ 0.77
XRCC1-207ENST00000598165 ATP7BP35670 1465 aa19.87■□□□□ 0.77
XRCC1-207ENST00000598165 PMFBP1Q8TBY8 1022 aa19.87■□□□□ 0.77
XRCC1-207ENST00000598165 RGPD8O14715 1765 aaPredicted RBP19.86■□□□□ 0.77
XRCC1-207ENST00000598165 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
XRCC1-207ENST00000598165 CCDC61Q9Y6R9 512 aa19.86■□□□□ 0.77
XRCC1-207ENST00000598165 KIF1AQ12756 1690 aa19.86■□□□□ 0.77
XRCC1-207ENST00000598165 SOS2Q07890 1332 aaPredicted RBP19.85■□□□□ 0.77
XRCC1-207ENST00000598165 SLC24A1O60721 1099 aa19.85■□□□□ 0.77
XRCC1-207ENST00000598165 LRRC59Q96AG4 307 aaKnown RBP19.85■□□□□ 0.77
XRCC1-207ENST00000598165 SHPRHQ149N8 1683 aa19.84■□□□□ 0.77
XRCC1-207ENST00000598165 XPCQ01831 940 aaPredicted RBP19.83■□□□□ 0.77
XRCC1-207ENST00000598165 NGDNQ8NEJ9 315 aaKnown RBP19.83■□□□□ 0.77
XRCC1-207ENST00000598165 TESK2Q96S53 571 aa19.83■□□□□ 0.77
XRCC1-207ENST00000598165 PSME1Q06323 249 aa19.82■□□□□ 0.76
XRCC1-207ENST00000598165 KRT28Q7Z3Y7 464 aa19.82■□□□□ 0.76
XRCC1-207ENST00000598165 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
XRCC1-207ENST00000598165 ZNF772Q68DY9 489 aaPredicted RBP19.81■□□□□ 0.76
XRCC1-207ENST00000598165 ITSN1Q15811 1721 aa19.81■□□□□ 0.76
XRCC1-207ENST00000598165 PXDNQ92626 1479 aa19.8■□□□□ 0.76
XRCC1-207ENST00000598165 PPIP5K1Q6PFW1 1433 aa19.8■□□□□ 0.76
XRCC1-207ENST00000598165 PLEKHG3A1L390 1219 aa19.8■□□□□ 0.76
XRCC1-207ENST00000598165 ATAD2Q6PL18 1390 aa19.79■□□□□ 0.76
XRCC1-207ENST00000598165 TMF1P82094 1093 aa19.78■□□□□ 0.76
XRCC1-207ENST00000598165 CABP1Q9NZU7 370 aa19.78■□□□□ 0.76
XRCC1-207ENST00000598165 TOPAZ1Q8N9V7 1692 aa19.78■□□□□ 0.76
XRCC1-207ENST00000598165 ACEP12821 1306 aa19.77■□□□□ 0.76
XRCC1-207ENST00000598165 NUTM2BA6NNL0 878 aaPredicted RBP19.77■□□□□ 0.76
XRCC1-207ENST00000598165 NUTM2EB1AL46 878 aaPredicted RBP19.77■□□□□ 0.76
XRCC1-207ENST00000598165 NUTM2AQ8IVF1 878 aaPredicted RBP19.77■□□□□ 0.76
XRCC1-207ENST00000598165 POLR3AO14802 1390 aaPredicted RBP19.76■□□□□ 0.75
XRCC1-207ENST00000598165 HSPA5P11021 654 aaKnown RBP19.76■□□□□ 0.75
XRCC1-207ENST00000598165 UPF1Q92900 1129 aaKnown RBP eCLIP19.76■□□□□ 0.75
XRCC1-207ENST00000598165 PUS7Q96PZ0 661 aaKnown RBP19.76■□□□□ 0.75
XRCC1-207ENST00000598165 PNPLA6Q8IY17 1366 aa19.75■□□□□ 0.75
XRCC1-207ENST00000598165 SPATA31A3Q5VYP0 1347 aa19.75■□□□□ 0.75
XRCC1-207ENST00000598165 SBNO1A3KN83 1393 aa19.74■□□□□ 0.75
XRCC1-207ENST00000598165 CDCA8Q53HL2 280 aa19.73■□□□□ 0.75
XRCC1-207ENST00000598165 TMC1Q8TDI8 760 aa19.73■□□□□ 0.75
XRCC1-207ENST00000598165 PAK3O75914 559 aaPredicted RBP19.72■□□□□ 0.75
XRCC1-207ENST00000598165 RXRBP28702 533 aa19.72■□□□□ 0.75
XRCC1-207ENST00000598165 TNS3Q68CZ2 1445 aa19.72■□□□□ 0.75
XRCC1-207ENST00000598165 LMOD2Q6P5Q4 547 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms