RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
PPFIA4-208ENST00000597023 LRRC59Q96AG4 307 aaKnown RBP22.85■■□□□ 1.25
PPFIA4-208ENST00000597023 ABCC11Q96J66 1382 aa22.85■■□□□ 1.25
PPFIA4-208ENST00000597023 YTHDC2Q9H6S0 1430 aaKnown RBP22.84■■□□□ 1.25
PPFIA4-208ENST00000597023 ESCO1Q5FWF5 840 aa22.83■■□□□ 1.25
PPFIA4-208ENST00000597023 DCAF11Q8TEB1 546 aa22.83■■□□□ 1.25
PPFIA4-208ENST00000597023 TECPR2O15040 1411 aa22.82■■□□□ 1.24
PPFIA4-208ENST00000597023 MYOM2P54296 1465 aa22.81■■□□□ 1.24
PPFIA4-208ENST00000597023 NRXN1Q9ULB1 1477 aa22.81■■□□□ 1.24
PPFIA4-208ENST00000597023 SAFB2Q14151 953 aaKnown RBP eCLIP22.81■■□□□ 1.24
PPFIA4-208ENST00000597023 NHSL1Q5SYE7 1610 aa22.81■■□□□ 1.24
PPFIA4-208ENST00000597023 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
PPFIA4-208ENST00000597023 PNPLA6Q8IY17 1366 aa22.78■■□□□ 1.24
PPFIA4-208ENST00000597023 SHPRHQ149N8 1683 aa22.78■■□□□ 1.24
PPFIA4-208ENST00000597023 XPCQ01831 940 aaPredicted RBP22.77■■□□□ 1.24
PPFIA4-208ENST00000597023 PRAM1Q96QH2 718 aa22.77■■□□□ 1.24
PPFIA4-208ENST00000597023 SOS2Q07890 1332 aaPredicted RBP22.77■■□□□ 1.24
PPFIA4-208ENST00000597023 FOXO3O43524 673 aa22.76■■□□□ 1.23
PPFIA4-208ENST00000597023 SIRT1Q96EB6 747 aa22.75■■□□□ 1.23
PPFIA4-208ENST00000597023 CDC42BPGQ6DT37 1551 aa22.75■■□□□ 1.23
PPFIA4-208ENST00000597023 TRAK1Q9UPV9 953 aa22.74■■□□□ 1.23
PPFIA4-208ENST00000597023 ADAMTS2O95450 1211 aa22.73■■□□□ 1.23
PPFIA4-208ENST00000597023 ZNF772Q68DY9 489 aaPredicted RBP22.73■■□□□ 1.23
PPFIA4-208ENST00000597023 POGKQ9P215 609 aa22.73■■□□□ 1.23
PPFIA4-208ENST00000597023 KNDC1Q76NI1 1749 aa22.72■■□□□ 1.23
PPFIA4-208ENST00000597023 C8orf37Q96NL8 207 aa22.72■■□□□ 1.23
PPFIA4-208ENST00000597023 AFF2P51816 1311 aa22.72■■□□□ 1.23
PPFIA4-208ENST00000597023 NPHP3Q7Z494 1330 aa22.71■■□□□ 1.23
PPFIA4-208ENST00000597023 HIRIP3Q9BW71 556 aaPredicted RBP22.68■■□□□ 1.22
PPFIA4-208ENST00000597023 LAMC1P11047 1609 aa22.68■■□□□ 1.22
PPFIA4-208ENST00000597023 ADGRB1O14514 1584 aa22.67■■□□□ 1.22
PPFIA4-208ENST00000597023 MINK1Q8N4C8 1332 aaPredicted RBP22.65■■□□□ 1.22
PPFIA4-208ENST00000597023 NGLY1Q96IV0 654 aa22.65■■□□□ 1.22
PPFIA4-208ENST00000597023 PXDNQ92626 1479 aa22.65■■□□□ 1.22
PPFIA4-208ENST00000597023 STAC3Q96MF2 364 aa22.64■■□□□ 1.21
PPFIA4-208ENST00000597023 FMN2Q9NZ56 1722 aa22.63■■□□□ 1.21
PPFIA4-208ENST00000597023 RXRBP28702 533 aa22.63■■□□□ 1.21
PPFIA4-208ENST00000597023 KRT28Q7Z3Y7 464 aa22.63■■□□□ 1.21
PPFIA4-208ENST00000597023 PHF8Q9UPP1 1060 aa22.63■■□□□ 1.21
PPFIA4-208ENST00000597023 DLC1Q96QB1 1528 aa22.62■■□□□ 1.21
PPFIA4-208ENST00000597023 QTRT2Q9H974 415 aaKnown RBP22.62■■□□□ 1.21
PPFIA4-208ENST00000597023 PLEKHG5O94827 1062 aa22.61■■□□□ 1.21
PPFIA4-208ENST00000597023 PMFBP1Q8TBY8 1022 aa22.61■■□□□ 1.21
PPFIA4-208ENST00000597023 SIN3AQ96ST3 1273 aa22.59■■□□□ 1.21
PPFIA4-208ENST00000597023 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
PPFIA4-208ENST00000597023 NBPF1Q3BBV0 1214 aa22.57■■□□□ 1.2
PPFIA4-208ENST00000597023 USP21Q9UK80 565 aa22.56■■□□□ 1.2
PPFIA4-208ENST00000597023 WASLO00401 505 aaPredicted RBP22.55■■□□□ 1.2
PPFIA4-208ENST00000597023 PSME1Q06323 249 aa22.55■■□□□ 1.2
PPFIA4-208ENST00000597023 NEUROD1Q13562 356 aa22.55■■□□□ 1.2
PPFIA4-208ENST00000597023 LMOD2Q6P5Q4 547 aa22.55■■□□□ 1.2
PPFIA4-208ENST00000597023 PRR36Q9H6K5 1346 aa22.55■■□□□ 1.2
PPFIA4-208ENST00000597023 RGPD8O14715 1765 aaPredicted RBP22.54■■□□□ 1.2
PPFIA4-208ENST00000597023 CABLES1Q8TDN4 633 aa22.53■■□□□ 1.2
PPFIA4-208ENST00000597023 RBM6P78332 1123 aaKnown RBP22.52■■□□□ 1.2
PPFIA4-208ENST00000597023 FNBP4Q8N3X1 1017 aaPredicted RBP22.52■■□□□ 1.2
PPFIA4-208ENST00000597023 L3MBTL2Q969R5 705 aa22.52■■□□□ 1.2
PPFIA4-208ENST00000597023 COL22A1Q8NFW1 1626 aaPredicted RBP22.52■■□□□ 1.2
PPFIA4-208ENST00000597023 KIF1AQ12756 1690 aa22.52■■□□□ 1.2
PPFIA4-208ENST00000597023 USP32Q8NFA0 1604 aa22.5■■□□□ 1.19
PPFIA4-208ENST00000597023 ANKARQ7Z5J8 1434 aa22.5■■□□□ 1.19
PPFIA4-208ENST00000597023 ADGRB2O60241 1585 aa22.5■■□□□ 1.19
PPFIA4-208ENST00000597023 HAP1P54257 671 aaPredicted RBP22.49■■□□□ 1.19
PPFIA4-208ENST00000597023 TNS3Q68CZ2 1445 aa22.48■■□□□ 1.19
PPFIA4-208ENST00000597023 TRPC5Q9UL62 973 aaPredicted RBP22.48■■□□□ 1.19
PPFIA4-208ENST00000597023 CDK19Q9BWU1 502 aa22.47■■□□□ 1.19
PPFIA4-208ENST00000597023 NGDNQ8NEJ9 315 aaKnown RBP22.46■■□□□ 1.19
PPFIA4-208ENST00000597023 UPF1Q92900 1129 aaKnown RBP eCLIP22.46■■□□□ 1.19
PPFIA4-208ENST00000597023 NUDT16Q96DE0 195 aaKnown RBP22.46■■□□□ 1.19
PPFIA4-208ENST00000597023 SBNO1A3KN83 1393 aa22.46■■□□□ 1.19
PPFIA4-208ENST00000597023 RGS12O14924 1447 aa22.46■■□□□ 1.19
PPFIA4-208ENST00000597023 TULP4Q9NRJ4 1543 aa22.46■■□□□ 1.19
PPFIA4-208ENST00000597023 EIF3AQ14152 1382 aaKnown RBP22.45■■□□□ 1.18
PPFIA4-208ENST00000597023 ARHGEF28Q8N1W1 1705 aaKnown RBP22.45■■□□□ 1.18
PPFIA4-208ENST00000597023 BCL9LQ86UU0 1499 aa22.44■■□□□ 1.18
PPFIA4-208ENST00000597023 CDK12Q9NYV4 1490 aaPredicted RBP22.44■■□□□ 1.18
PPFIA4-208ENST00000597023 GPRASP1Q5JY77 1395 aa22.43■■□□□ 1.18
PPFIA4-208ENST00000597023 ATRNO75882 1429 aa22.42■■□□□ 1.18
PPFIA4-208ENST00000597023 PAK3O75914 559 aaPredicted RBP22.42■■□□□ 1.18
PPFIA4-208ENST00000597023 ARHGEF10O15013 1369 aa22.4■■□□□ 1.18
PPFIA4-208ENST00000597023 UNC5CLQ8IV45 518 aa22.39■■□□□ 1.17
PPFIA4-208ENST00000597023 KIAA1210Q9ULL0 1709 aa22.39■■□□□ 1.17
PPFIA4-208ENST00000597023 ATP7BP35670 1465 aa22.39■■□□□ 1.17
PPFIA4-208ENST00000597023 CENPJQ9HC77 1338 aaPredicted RBP22.38■■□□□ 1.17
PPFIA4-208ENST00000597023 GJD4Q96KN9 370 aaPredicted RBP22.38■■□□□ 1.17
PPFIA4-208ENST00000597023 FAM83GA6ND36 823 aa22.36■■□□□ 1.17
PPFIA4-208ENST00000597023 SRPK2P78362 688 aaKnown RBP22.36■■□□□ 1.17
PPFIA4-208ENST00000597023 CABP2Q9NPB3 220 aa22.36■■□□□ 1.17
PPFIA4-208ENST00000597023 SLIT2O94813 1529 aa22.36■■□□□ 1.17
PPFIA4-208ENST00000597023 MARF1Q9Y4F3 1742 aaKnown RBP22.35■■□□□ 1.17
PPFIA4-208ENST00000597023 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
PPFIA4-208ENST00000597023 CCDC61Q9Y6R9 512 aa22.35■■□□□ 1.17
PPFIA4-208ENST00000597023 ACEP12821 1306 aa22.34■■□□□ 1.17
PPFIA4-208ENST00000597023 NBPF8Q3BBV2 869 aa22.34■■□□□ 1.17
PPFIA4-208ENST00000597023 NUTM2GQ5VZR2 741 aa22.34■■□□□ 1.17
PPFIA4-208ENST00000597023 TRPM3Q9HCF6 1732 aaPredicted RBP22.34■■□□□ 1.17
PPFIA4-208ENST00000597023 CCDC9Q9Y3X0 531 aaKnown RBP22.32■■□□□ 1.16
PPFIA4-208ENST00000597023 ROCK2O75116 1388 aaKnown RBP22.31■■□□□ 1.16
PPFIA4-208ENST00000597023 RALGAPBQ86X10 1494 aa22.3■■□□□ 1.16
PPFIA4-208ENST00000597023 PLEKHG3A1L390 1219 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms