RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 STK26Q9P289 416 aa23.77■■□□□ 1.4
LINC02560-201ENST00000596379 SPATA31E1Q6ZUB1 1445 aa23.76■■□□□ 1.39
LINC02560-201ENST00000596379 RBM6P78332 1123 aaKnown RBP23.75■■□□□ 1.39
LINC02560-201ENST00000596379 ESCO1Q5FWF5 840 aa23.75■■□□□ 1.39
LINC02560-201ENST00000596379 WAPLQ7Z5K2 1190 aa23.75■■□□□ 1.39
LINC02560-201ENST00000596379 TMEM132EQ6IEE7 984 aa23.74■■□□□ 1.39
LINC02560-201ENST00000596379 ANKRD30BQ9BXX2 1392 aa23.74■■□□□ 1.39
LINC02560-201ENST00000596379 IFT172Q9UG01 1749 aa23.72■■□□□ 1.39
LINC02560-201ENST00000596379 CDC42BPGQ6DT37 1551 aa23.71■■□□□ 1.39
LINC02560-201ENST00000596379 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
LINC02560-201ENST00000596379 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
LINC02560-201ENST00000596379 NUTM2FA1L443 756 aa23.7■■□□□ 1.38
LINC02560-201ENST00000596379 RGS12O14924 1447 aa23.69■■□□□ 1.38
LINC02560-201ENST00000596379 TECPR2O15040 1411 aa23.69■■□□□ 1.38
LINC02560-201ENST00000596379 ABCC11Q96J66 1382 aa23.69■■□□□ 1.38
LINC02560-201ENST00000596379 FOXO3O43524 673 aa23.69■■□□□ 1.38
LINC02560-201ENST00000596379 USP21Q9UK80 565 aa23.69■■□□□ 1.38
LINC02560-201ENST00000596379 XPCQ01831 940 aaPredicted RBP23.68■■□□□ 1.38
LINC02560-201ENST00000596379 PLEKHH1Q9ULM0 1364 aa23.67■■□□□ 1.38
LINC02560-201ENST00000596379 PIK3C2GO75747 1445 aa23.67■■□□□ 1.38
LINC02560-201ENST00000596379 COL22A1Q8NFW1 1626 aaPredicted RBP23.66■■□□□ 1.38
LINC02560-201ENST00000596379 FNBP4Q8N3X1 1017 aaPredicted RBP23.66■■□□□ 1.38
LINC02560-201ENST00000596379 PXDNQ92626 1479 aa23.65■■□□□ 1.38
LINC02560-201ENST00000596379 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.37
LINC02560-201ENST00000596379 YTHDC2Q9H6S0 1430 aaKnown RBP23.64■■□□□ 1.37
LINC02560-201ENST00000596379 KNDC1Q76NI1 1749 aa23.64■■□□□ 1.37
LINC02560-201ENST00000596379 ACIN1Q9UKV3 1341 aaKnown RBP23.63■■□□□ 1.37
LINC02560-201ENST00000596379 C14orf93Q9H972 538 aaKnown RBP23.63■■□□□ 1.37
LINC02560-201ENST00000596379 MYOM2P54296 1465 aa23.62■■□□□ 1.37
LINC02560-201ENST00000596379 CFAP70Q5T0N1 1121 aa23.6■■□□□ 1.37
LINC02560-201ENST00000596379 SIRT1Q96EB6 747 aa23.6■■□□□ 1.37
LINC02560-201ENST00000596379 FMN2Q9NZ56 1722 aa23.59■■□□□ 1.37
LINC02560-201ENST00000596379 ATRNO75882 1429 aa23.58■■□□□ 1.36
LINC02560-201ENST00000596379 MARF1Q9Y4F3 1742 aaKnown RBP23.56■■□□□ 1.36
LINC02560-201ENST00000596379 DHX57Q6P158 1386 aaKnown RBP23.56■■□□□ 1.36
LINC02560-201ENST00000596379 BCL9LQ86UU0 1499 aa23.56■■□□□ 1.36
LINC02560-201ENST00000596379 KRT28Q7Z3Y7 464 aa23.55■■□□□ 1.36
LINC02560-201ENST00000596379 SPATA31A3Q5VYP0 1347 aa23.55■■□□□ 1.36
LINC02560-201ENST00000596379 NRXN1Q9ULB1 1477 aa23.55■■□□□ 1.36
LINC02560-201ENST00000596379 RGPD8O14715 1765 aaPredicted RBP23.55■■□□□ 1.36
LINC02560-201ENST00000596379 KIF1AQ12756 1690 aa23.53■■□□□ 1.36
LINC02560-201ENST00000596379 ATAD2Q6PL18 1390 aa23.52■■□□□ 1.36
LINC02560-201ENST00000596379 RAB3GAP2Q9H2M9 1393 aa23.52■■□□□ 1.36
LINC02560-201ENST00000596379 SAFB2Q14151 953 aaKnown RBP eCLIP23.52■■□□□ 1.36
LINC02560-201ENST00000596379 PRAM1Q96QH2 718 aa23.52■■□□□ 1.36
LINC02560-201ENST00000596379 PHF8Q9UPP1 1060 aa23.52■■□□□ 1.36
LINC02560-201ENST00000596379 GJD4Q96KN9 370 aaPredicted RBP23.5■■□□□ 1.35
LINC02560-201ENST00000596379 PSME1Q06323 249 aa23.48■■□□□ 1.35
LINC02560-201ENST00000596379 POGKQ9P215 609 aa23.48■■□□□ 1.35
LINC02560-201ENST00000596379 UNC5CLQ8IV45 518 aa23.47■■□□□ 1.35
LINC02560-201ENST00000596379 PLEKHG5O94827 1062 aa23.45■■□□□ 1.34
LINC02560-201ENST00000596379 CABLES1Q8TDN4 633 aa23.45■■□□□ 1.34
LINC02560-201ENST00000596379 SLIT2O94813 1529 aa23.44■■□□□ 1.34
LINC02560-201ENST00000596379 HAP1P54257 671 aaPredicted RBP23.44■■□□□ 1.34
LINC02560-201ENST00000596379 KDM2AQ9Y2K7 1162 aa23.44■■□□□ 1.34
LINC02560-201ENST00000596379 DLC1Q96QB1 1528 aa23.43■■□□□ 1.34
LINC02560-201ENST00000596379 TNS3Q68CZ2 1445 aa23.43■■□□□ 1.34
LINC02560-201ENST00000596379 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.43■■□□□ 1.34
LINC02560-201ENST00000596379 LMOD2Q6P5Q4 547 aa23.43■■□□□ 1.34
LINC02560-201ENST00000596379 PMFBP1Q8TBY8 1022 aa23.43■■□□□ 1.34
LINC02560-201ENST00000596379 TRAK1Q9UPV9 953 aa23.43■■□□□ 1.34
LINC02560-201ENST00000596379 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
LINC02560-201ENST00000596379 SBNO1A3KN83 1393 aa23.41■■□□□ 1.34
LINC02560-201ENST00000596379 DCAF11Q8TEB1 546 aa23.41■■□□□ 1.34
LINC02560-201ENST00000596379 ADGRB1O14514 1584 aa23.4■■□□□ 1.34
LINC02560-201ENST00000596379 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
LINC02560-201ENST00000596379 RALGAPBQ86X10 1494 aa23.4■■□□□ 1.34
LINC02560-201ENST00000596379 GLI3P10071 1580 aa23.39■■□□□ 1.33
LINC02560-201ENST00000596379 CCDC125Q86Z20 511 aa23.38■■□□□ 1.33
LINC02560-201ENST00000596379 ANKARQ7Z5J8 1434 aa23.38■■□□□ 1.33
LINC02560-201ENST00000596379 MINK1Q8N4C8 1332 aaPredicted RBP23.37■■□□□ 1.33
LINC02560-201ENST00000596379 ARHGEF10O15013 1369 aa23.37■■□□□ 1.33
LINC02560-201ENST00000596379 ADGRB2O60241 1585 aa23.35■■□□□ 1.33
LINC02560-201ENST00000596379 VPS72Q15906 364 aa23.34■■□□□ 1.33
LINC02560-201ENST00000596379 STAC3Q96MF2 364 aa23.34■■□□□ 1.33
LINC02560-201ENST00000596379 FAM83GA6ND36 823 aa23.33■■□□□ 1.33
LINC02560-201ENST00000596379 HRCP23327 699 aa23.33■■□□□ 1.33
LINC02560-201ENST00000596379 CCDC9Q9Y3X0 531 aaKnown RBP23.33■■□□□ 1.33
LINC02560-201ENST00000596379 BRWD3Q6RI45 1802 aa23.33■■□□□ 1.32
LINC02560-201ENST00000596379 ABCA3Q99758 1704 aa23.33■■□□□ 1.32
LINC02560-201ENST00000596379 PRR36Q9H6K5 1346 aa23.33■■□□□ 1.32
LINC02560-201ENST00000596379 WASLO00401 505 aaPredicted RBP23.32■■□□□ 1.32
LINC02560-201ENST00000596379 SEPT12Q8IYM1 358 aa23.32■■□□□ 1.32
LINC02560-201ENST00000596379 ZRANB1Q9UGI0 708 aa23.32■■□□□ 1.32
LINC02560-201ENST00000596379 PLCH1Q4KWH8 1693 aa23.32■■□□□ 1.32
LINC02560-201ENST00000596379 NWD2Q9ULI1 1742 aa23.31■■□□□ 1.32
LINC02560-201ENST00000596379 EP400Q96L91 3159 aa23.31■■□□□ 1.32
LINC02560-201ENST00000596379 GPRASP1Q5JY77 1395 aa23.3■■□□□ 1.32
LINC02560-201ENST00000596379 TRPM3Q9HCF6 1732 aaPredicted RBP23.3■■□□□ 1.32
LINC02560-201ENST00000596379 EIF3AQ14152 1382 aaKnown RBP23.29■■□□□ 1.32
LINC02560-201ENST00000596379 ONECUT3O60422 494 aaPredicted RBP23.29■■□□□ 1.32
LINC02560-201ENST00000596379 NGDNQ8NEJ9 315 aaKnown RBP23.28■■□□□ 1.32
LINC02560-201ENST00000596379 TULP4Q9NRJ4 1543 aa23.28■■□□□ 1.32
LINC02560-201ENST00000596379 ALS2Q96Q42 1657 aa23.25■■□□□ 1.31
LINC02560-201ENST00000596379 BLMP54132 1417 aaPredicted RBP23.25■■□□□ 1.31
LINC02560-201ENST00000596379 BTG4Q9NY30 223 aa23.25■■□□□ 1.31
LINC02560-201ENST00000596379 PAK3O75914 559 aaPredicted RBP23.24■■□□□ 1.31
LINC02560-201ENST00000596379 KRT27Q7Z3Y8 459 aa23.24■■□□□ 1.31
LINC02560-201ENST00000596379 ARHGEF28Q8N1W1 1705 aaKnown RBP23.22■■□□□ 1.31
LINC02560-201ENST00000596379 DEFB132Q7Z7B7 95 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms