RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 SOS2Q07890 1332 aaPredicted RBP24.32■■□□□ 1.48
SYMPK-204ENST00000593959 DDX17Q92841 729 aaKnown RBP24.31■■□□□ 1.48
SYMPK-204ENST00000593959 YTHDC2Q9H6S0 1430 aaKnown RBP24.31■■□□□ 1.48
SYMPK-204ENST00000593959 KNDC1Q76NI1 1749 aa24.3■■□□□ 1.48
SYMPK-204ENST00000593959 WAPLQ7Z5K2 1190 aa24.29■■□□□ 1.48
SYMPK-204ENST00000593959 STK26Q9P289 416 aa24.29■■□□□ 1.48
SYMPK-204ENST00000593959 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
SYMPK-204ENST00000593959 PLEKHH1Q9ULM0 1364 aa24.27■■□□□ 1.48
SYMPK-204ENST00000593959 CFAP70Q5T0N1 1121 aa24.26■■□□□ 1.47
SYMPK-204ENST00000593959 ZNF772Q68DY9 489 aaPredicted RBP24.25■■□□□ 1.47
SYMPK-204ENST00000593959 STAC3Q96MF2 364 aa24.24■■□□□ 1.47
SYMPK-204ENST00000593959 MEX3CQ5U5Q3 659 aaKnown RBP24.23■■□□□ 1.47
SYMPK-204ENST00000593959 DHX57Q6P158 1386 aaKnown RBP24.23■■□□□ 1.47
SYMPK-204ENST00000593959 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.46
SYMPK-204ENST00000593959 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.46
SYMPK-204ENST00000593959 ESCO1Q5FWF5 840 aa24.2■■□□□ 1.46
SYMPK-204ENST00000593959 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.46
SYMPK-204ENST00000593959 NPHP3Q7Z494 1330 aa24.19■■□□□ 1.46
SYMPK-204ENST00000593959 ADGRB1O14514 1584 aa24.19■■□□□ 1.46
SYMPK-204ENST00000593959 PXDNQ92626 1479 aa24.18■■□□□ 1.46
SYMPK-204ENST00000593959 DLC1Q96QB1 1528 aa24.17■■□□□ 1.46
SYMPK-204ENST00000593959 FMN2Q9NZ56 1722 aa24.15■■□□□ 1.46
SYMPK-204ENST00000593959 AFF2P51816 1311 aa24.14■■□□□ 1.46
SYMPK-204ENST00000593959 FOXO3O43524 673 aa24.14■■□□□ 1.45
SYMPK-204ENST00000593959 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.45
SYMPK-204ENST00000593959 COL22A1Q8NFW1 1626 aaPredicted RBP24.13■■□□□ 1.45
SYMPK-204ENST00000593959 PRAM1Q96QH2 718 aa24.13■■□□□ 1.45
SYMPK-204ENST00000593959 CDK12Q9NYV4 1490 aaPredicted RBP24.11■■□□□ 1.45
SYMPK-204ENST00000593959 NUTM2FA1L443 756 aa24.1■■□□□ 1.45
SYMPK-204ENST00000593959 RXRBP28702 533 aa24.1■■□□□ 1.45
SYMPK-204ENST00000593959 C8orf37Q96NL8 207 aa24.09■■□□□ 1.45
SYMPK-204ENST00000593959 KDM2AQ9Y2K7 1162 aa24.09■■□□□ 1.45
SYMPK-204ENST00000593959 FNBP4Q8N3X1 1017 aaPredicted RBP24.07■■□□□ 1.44
SYMPK-204ENST00000593959 ADGRB2O60241 1585 aa24.07■■□□□ 1.44
SYMPK-204ENST00000593959 KIF1AQ12756 1690 aa24.06■■□□□ 1.44
SYMPK-204ENST00000593959 ADAMTS2O95450 1211 aa24.06■■□□□ 1.44
SYMPK-204ENST00000593959 XPCQ01831 940 aaPredicted RBP24.05■■□□□ 1.44
SYMPK-204ENST00000593959 NGLY1Q96IV0 654 aa24.05■■□□□ 1.44
SYMPK-204ENST00000593959 POGKQ9P215 609 aa24.05■■□□□ 1.44
SYMPK-204ENST00000593959 SPATA31A3Q5VYP0 1347 aa24.05■■□□□ 1.44
SYMPK-204ENST00000593959 ANKARQ7Z5J8 1434 aa24.04■■□□□ 1.44
SYMPK-204ENST00000593959 QTRT2Q9H974 415 aaKnown RBP24.04■■□□□ 1.44
SYMPK-204ENST00000593959 PHF8Q9UPP1 1060 aa24.04■■□□□ 1.44
SYMPK-204ENST00000593959 TRAK1Q9UPV9 953 aa24.04■■□□□ 1.44
SYMPK-204ENST00000593959 SAFB2Q14151 953 aaKnown RBP eCLIP24.03■■□□□ 1.44
SYMPK-204ENST00000593959 RBM6P78332 1123 aaKnown RBP24.02■■□□□ 1.44
SYMPK-204ENST00000593959 KRT28Q7Z3Y7 464 aa24.02■■□□□ 1.44
SYMPK-204ENST00000593959 USP32Q8NFA0 1604 aa23.99■■□□□ 1.43
SYMPK-204ENST00000593959 SBNO1A3KN83 1393 aa23.98■■□□□ 1.43
SYMPK-204ENST00000593959 RGPD8O14715 1765 aaPredicted RBP23.98■■□□□ 1.43
SYMPK-204ENST00000593959 PSME1Q06323 249 aa23.97■■□□□ 1.43
SYMPK-204ENST00000593959 USP21Q9UK80 565 aa23.97■■□□□ 1.43
SYMPK-204ENST00000593959 BCL9LQ86UU0 1499 aa23.96■■□□□ 1.43
SYMPK-204ENST00000593959 EIF3AQ14152 1382 aaKnown RBP23.96■■□□□ 1.43
SYMPK-204ENST00000593959 WASLO00401 505 aaPredicted RBP23.96■■□□□ 1.43
SYMPK-204ENST00000593959 ATRNO75882 1429 aa23.95■■□□□ 1.42
SYMPK-204ENST00000593959 TNS3Q68CZ2 1445 aa23.95■■□□□ 1.42
SYMPK-204ENST00000593959 PRR36Q9H6K5 1346 aa23.95■■□□□ 1.42
SYMPK-204ENST00000593959 UPF1Q92900 1129 aaKnown RBP eCLIP23.95■■□□□ 1.42
SYMPK-204ENST00000593959 HIRIP3Q9BW71 556 aaPredicted RBP23.95■■□□□ 1.42
SYMPK-204ENST00000593959 TRPC5Q9UL62 973 aaPredicted RBP23.95■■□□□ 1.42
SYMPK-204ENST00000593959 RGS12O14924 1447 aa23.94■■□□□ 1.42
SYMPK-204ENST00000593959 MINK1Q8N4C8 1332 aaPredicted RBP23.94■■□□□ 1.42
SYMPK-204ENST00000593959 TULP4Q9NRJ4 1543 aa23.94■■□□□ 1.42
SYMPK-204ENST00000593959 KIAA1210Q9ULL0 1709 aa23.93■■□□□ 1.42
SYMPK-204ENST00000593959 MARF1Q9Y4F3 1742 aaKnown RBP23.92■■□□□ 1.42
SYMPK-204ENST00000593959 ARHGEF28Q8N1W1 1705 aaKnown RBP23.91■■□□□ 1.42
SYMPK-204ENST00000593959 PMFBP1Q8TBY8 1022 aa23.9■■□□□ 1.42
SYMPK-204ENST00000593959 ARHGEF10O15013 1369 aa23.9■■□□□ 1.42
SYMPK-204ENST00000593959 SLIT2O94813 1529 aa23.89■■□□□ 1.42
SYMPK-204ENST00000593959 NBPF1Q3BBV0 1214 aa23.88■■□□□ 1.41
SYMPK-204ENST00000593959 TRPM3Q9HCF6 1732 aaPredicted RBP23.85■■□□□ 1.41
SYMPK-204ENST00000593959 ATP7BP35670 1465 aa23.85■■□□□ 1.41
SYMPK-204ENST00000593959 GPRASP1Q5JY77 1395 aa23.84■■□□□ 1.41
SYMPK-204ENST00000593959 TRIM26Q12899 539 aaPredicted RBP23.84■■□□□ 1.41
SYMPK-204ENST00000593959 UNC5CLQ8IV45 518 aa23.84■■□□□ 1.41
SYMPK-204ENST00000593959 CABLES1Q8TDN4 633 aa23.84■■□□□ 1.41
SYMPK-204ENST00000593959 L3MBTL2Q969R5 705 aa23.84■■□□□ 1.41
SYMPK-204ENST00000593959 NUDT16Q96DE0 195 aaKnown RBP23.84■■□□□ 1.41
SYMPK-204ENST00000593959 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.84■■□□□ 1.41
SYMPK-204ENST00000593959 GJD4Q96KN9 370 aaPredicted RBP23.83■■□□□ 1.41
SYMPK-204ENST00000593959 EP400Q96L91 3159 aa23.83■■□□□ 1.4
SYMPK-204ENST00000593959 CDK19Q9BWU1 502 aa23.82■■□□□ 1.4
SYMPK-204ENST00000593959 ALS2Q96Q42 1657 aa23.81■■□□□ 1.4
SYMPK-204ENST00000593959 SIN3AQ96ST3 1273 aa23.8■■□□□ 1.4
SYMPK-204ENST00000593959 ABCA3Q99758 1704 aa23.79■■□□□ 1.4
SYMPK-204ENST00000593959 POLR3AO14802 1390 aaPredicted RBP23.78■■□□□ 1.4
SYMPK-204ENST00000593959 NGDNQ8NEJ9 315 aaKnown RBP23.78■■□□□ 1.4
SYMPK-204ENST00000593959 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
SYMPK-204ENST00000593959 PLEKHG3A1L390 1219 aa23.77■■□□□ 1.4
SYMPK-204ENST00000593959 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
SYMPK-204ENST00000593959 RALGAPBQ86X10 1494 aa23.76■■□□□ 1.39
SYMPK-204ENST00000593959 FAM83GA6ND36 823 aa23.76■■□□□ 1.39
SYMPK-204ENST00000593959 VPS72Q15906 364 aa23.76■■□□□ 1.39
SYMPK-204ENST00000593959 ATAD2Q6PL18 1390 aa23.76■■□□□ 1.39
SYMPK-204ENST00000593959 ITSN1Q15811 1721 aa23.76■■□□□ 1.39
SYMPK-204ENST00000593959 GLI3P10071 1580 aa23.75■■□□□ 1.39
SYMPK-204ENST00000593959 HAP1P54257 671 aaPredicted RBP23.75■■□□□ 1.39
SYMPK-204ENST00000593959 CENPJQ9HC77 1338 aaPredicted RBP23.75■■□□□ 1.39
SYMPK-204ENST00000593959 NWD2Q9ULI1 1742 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms