RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 CD109Q6YHK3 1445 aa18.1■□□□□ 0.49
COLGALT1-202ENST00000593832 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
COLGALT1-202ENST00000593832 PCDHB15Q9Y5E8 787 aa18.09■□□□□ 0.49
COLGALT1-202ENST00000593832 ZMYM3Q14202 1370 aa18.09■□□□□ 0.49
COLGALT1-202ENST00000593832 XRCC6P12956 609 aaKnown RBP eCLIP18.08■□□□□ 0.49
COLGALT1-202ENST00000593832 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.48
COLGALT1-202ENST00000593832 FSD2A1L4K1 749 aa18.08■□□□□ 0.48
COLGALT1-202ENST00000593832 ARAP3Q8WWN8 1544 aa18.08■□□□□ 0.48
COLGALT1-202ENST00000593832 KIF3BO15066 747 aa18.07■□□□□ 0.48
COLGALT1-202ENST00000593832 SPHKAPQ2M3C7 1700 aa18.07■□□□□ 0.48
COLGALT1-202ENST00000593832 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
COLGALT1-202ENST00000593832 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
COLGALT1-202ENST00000593832 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
COLGALT1-202ENST00000593832 RLBP1P12271 317 aa18.06■□□□□ 0.48
COLGALT1-202ENST00000593832 RARSP54136 660 aaKnown RBP18.06■□□□□ 0.48
COLGALT1-202ENST00000593832 PDZRN3Q9UPQ7 1066 aa18.05■□□□□ 0.48
COLGALT1-202ENST00000593832 ATP7AQ04656 1500 aa18.05■□□□□ 0.48
COLGALT1-202ENST00000593832 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
COLGALT1-202ENST00000593832 TNNQ9UQP3 1299 aa18.04■□□□□ 0.48
COLGALT1-202ENST00000593832 STAC3Q96MF2 364 aa18.04■□□□□ 0.48
COLGALT1-202ENST00000593832 CEP152O94986 1710 aa18.04■□□□□ 0.48
COLGALT1-202ENST00000593832 POLR3AO14802 1390 aaPredicted RBP18.04■□□□□ 0.48
COLGALT1-202ENST00000593832 MCM4P33991 863 aa18.03■□□□□ 0.48
COLGALT1-202ENST00000593832 GOLGA6L3A6NEY3 463 aa18.03■□□□□ 0.48
COLGALT1-202ENST00000593832 TRPM2O94759 1503 aa18.02■□□□□ 0.48
COLGALT1-202ENST00000593832 RAPGEF3O95398 923 aa18.02■□□□□ 0.48
COLGALT1-202ENST00000593832 ERVK-7P63135 1459 aa18.02■□□□□ 0.47
COLGALT1-202ENST00000593832 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.47
COLGALT1-202ENST00000593832 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.47
COLGALT1-202ENST00000593832 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.47
COLGALT1-202ENST00000593832 PANK2Q9BZ23 570 aa18.02■□□□□ 0.47
COLGALT1-202ENST00000593832 CHMP4BQ9H444 224 aaKnown RBP18.02■□□□□ 0.47
COLGALT1-202ENST00000593832 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
COLGALT1-202ENST00000593832 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
COLGALT1-202ENST00000593832 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
COLGALT1-202ENST00000593832 PRDM4Q9UKN5 801 aa18■□□□□ 0.47
COLGALT1-202ENST00000593832 PTPRTO14522 1441 aa18■□□□□ 0.47
COLGALT1-202ENST00000593832 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
COLGALT1-202ENST00000593832 INO80Q9ULG1 1556 aaPredicted RBP17.99■□□□□ 0.47
COLGALT1-202ENST00000593832 CLTCL1P53675 1640 aa17.99■□□□□ 0.47
COLGALT1-202ENST00000593832 CLCN1P35523 988 aa17.99■□□□□ 0.47
COLGALT1-202ENST00000593832 GZF1Q9H116 711 aaPredicted RBP17.99■□□□□ 0.47
COLGALT1-202ENST00000593832 NEUROD2Q15784 382 aa17.98■□□□□ 0.47
COLGALT1-202ENST00000593832 PAXIP1Q6ZW49 1069 aaPredicted RBP17.98■□□□□ 0.47
COLGALT1-202ENST00000593832 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
COLGALT1-202ENST00000593832 SHPRHQ149N8 1683 aa17.98■□□□□ 0.47
COLGALT1-202ENST00000593832 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
COLGALT1-202ENST00000593832 BCL2L13Q9BXK5 485 aa17.97■□□□□ 0.47
COLGALT1-202ENST00000593832 IQSEC2Q5JU85 1478 aa17.97■□□□□ 0.47
COLGALT1-202ENST00000593832 KIAA1210Q9ULL0 1709 aa17.97■□□□□ 0.47
COLGALT1-202ENST00000593832 ZHX1Q9UKY1 873 aaPredicted RBP17.97■□□□□ 0.47
COLGALT1-202ENST00000593832 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
COLGALT1-202ENST00000593832 ZNF518AQ6AHZ1 1483 aa17.96■□□□□ 0.47
COLGALT1-202ENST00000593832 TRAK2O60296 914 aa17.96■□□□□ 0.47
COLGALT1-202ENST00000593832 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
COLGALT1-202ENST00000593832 CHMP5Q9NZZ3 219 aa17.96■□□□□ 0.47
COLGALT1-202ENST00000593832 GGT6Q6P531 493 aa17.95■□□□□ 0.46
COLGALT1-202ENST00000593832 KIDINS220Q9ULH0 1771 aa17.95■□□□□ 0.46
COLGALT1-202ENST00000593832 FAM69CQ0P6D2 419 aa17.95■□□□□ 0.46
COLGALT1-202ENST00000593832 WDR63Q8IWG1 891 aa17.95■□□□□ 0.46
COLGALT1-202ENST00000593832 C22orf23Q9BZE7 217 aa17.95■□□□□ 0.46
COLGALT1-202ENST00000593832 CFAP70Q5T0N1 1121 aa17.94■□□□□ 0.46
COLGALT1-202ENST00000593832 KANK1Q14678 1352 aa17.94■□□□□ 0.46
COLGALT1-202ENST00000593832 MVPQ14764 893 aaKnown RBP17.92■□□□□ 0.46
COLGALT1-202ENST00000593832 POGZQ7Z3K3 1410 aa17.92■□□□□ 0.46
COLGALT1-202ENST00000593832 MRE11P49959 708 aa17.92■□□□□ 0.46
COLGALT1-202ENST00000593832 ZNF692Q9BU19 519 aaPredicted RBP17.92■□□□□ 0.46
COLGALT1-202ENST00000593832 NAP1L2Q9ULW6 460 aaPredicted RBP17.92■□□□□ 0.46
COLGALT1-202ENST00000593832 CFAP65Q6ZU64 1925 aaKnown RBP17.91■□□□□ 0.46
COLGALT1-202ENST00000593832 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
COLGALT1-202ENST00000593832 TSPOAP1O95153 1857 aa17.91■□□□□ 0.46
COLGALT1-202ENST00000593832 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
COLGALT1-202ENST00000593832 CFAP74Q9C0B2 1584 aa17.89■□□□□ 0.46
COLGALT1-202ENST00000593832 PRDM10Q9NQV6 1147 aa17.89■□□□□ 0.46
COLGALT1-202ENST00000593832 MORC1Q86VD1 984 aa17.89■□□□□ 0.45
COLGALT1-202ENST00000593832 ABCA6Q8N139 1617 aa17.89■□□□□ 0.45
COLGALT1-202ENST00000593832 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.45
COLGALT1-202ENST00000593832 TNNT2P45379 298 aaPredicted RBP17.88■□□□□ 0.45
COLGALT1-202ENST00000593832 DDIT3P35638 169 aa17.88■□□□□ 0.45
COLGALT1-202ENST00000593832 GRPEL1Q9HAV7 217 aa17.88■□□□□ 0.45
COLGALT1-202ENST00000593832 MAP3K4Q9Y6R4 1608 aa17.88■□□□□ 0.45
COLGALT1-202ENST00000593832 NSD3Q9BZ95 1437 aa17.88■□□□□ 0.45
COLGALT1-202ENST00000593832 SBNO2Q9Y2G9 1366 aa17.87■□□□□ 0.45
COLGALT1-202ENST00000593832 NCOA3Q9Y6Q9 1424 aa17.87■□□□□ 0.45
COLGALT1-202ENST00000593832 NEURL4Q96JN8 1562 aa17.87■□□□□ 0.45
COLGALT1-202ENST00000593832 MYOM2P54296 1465 aa17.86■□□□□ 0.45
COLGALT1-202ENST00000593832 ZKSCAN2Q63HK3 967 aa17.86■□□□□ 0.45
COLGALT1-202ENST00000593832 DEPDC5O75140 1603 aa17.86■□□□□ 0.45
COLGALT1-202ENST00000593832 DDX11L8A8MPP1 907 aa17.86■□□□□ 0.45
COLGALT1-202ENST00000593832 DZIP1LQ8IYY4 767 aaKnown RBP17.86■□□□□ 0.45
COLGALT1-202ENST00000593832 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
COLGALT1-202ENST00000593832 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
COLGALT1-202ENST00000593832 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
COLGALT1-202ENST00000593832 TET3O43151 1660 aa17.85■□□□□ 0.45
COLGALT1-202ENST00000593832 HECW2Q9P2P5 1572 aa17.85■□□□□ 0.45
COLGALT1-202ENST00000593832 HDAC1Q13547 482 aaPredicted RBP17.85■□□□□ 0.45
COLGALT1-202ENST00000593832 MYO3AQ8NEV4 1616 aa17.85■□□□□ 0.45
COLGALT1-202ENST00000593832 ERBB4Q15303 1308 aa17.85■□□□□ 0.45
COLGALT1-202ENST00000593832 PLCD3Q8N3E9 789 aa17.85■□□□□ 0.45
COLGALT1-202ENST00000593832 ISY1Q9ULR0 285 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms