RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 DIEXFQ68CQ4 756 aaKnown RBP20.4■□□□□ 0.86
CAPN12-202ENST00000593700 CCDC7Q96M83 1385 aa20.4■□□□□ 0.86
CAPN12-202ENST00000593700 SLC26A8Q96RN1 970 aa20.4■□□□□ 0.86
CAPN12-202ENST00000593700 CERKQ8TCT0 537 aa20.39■□□□□ 0.85
CAPN12-202ENST00000593700 NWD1Q149M9 1564 aa20.38■□□□□ 0.85
CAPN12-202ENST00000593700 NKTRP30414 1462 aaKnown RBP20.38■□□□□ 0.85
CAPN12-202ENST00000593700 CENPJQ9HC77 1338 aaPredicted RBP20.38■□□□□ 0.85
CAPN12-202ENST00000593700 LRPPRCP42704 1394 aaKnown RBP20.37■□□□□ 0.85
CAPN12-202ENST00000593700 TMF1P82094 1093 aa20.37■□□□□ 0.85
CAPN12-202ENST00000593700 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
CAPN12-202ENST00000593700 CDCA8Q53HL2 280 aa20.36■□□□□ 0.85
CAPN12-202ENST00000593700 TMEM132EQ6IEE7 984 aa20.36■□□□□ 0.85
CAPN12-202ENST00000593700 WASHC2AQ641Q2 1341 aa20.35■□□□□ 0.85
CAPN12-202ENST00000593700 TRAK1Q9UPV9 953 aa20.35■□□□□ 0.85
CAPN12-202ENST00000593700 KIF7Q2M1P5 1343 aa20.34■□□□□ 0.85
CAPN12-202ENST00000593700 XRN1Q8IZH2 1706 aaKnown RBP20.34■□□□□ 0.85
CAPN12-202ENST00000593700 TECPR2O15040 1411 aa20.34■□□□□ 0.85
CAPN12-202ENST00000593700 ABCC11Q96J66 1382 aa20.32■□□□□ 0.84
CAPN12-202ENST00000593700 NCOA3Q9Y6Q9 1424 aa20.31■□□□□ 0.84
CAPN12-202ENST00000593700 TESK2Q96S53 571 aa20.31■□□□□ 0.84
CAPN12-202ENST00000593700 STRCP1A6NGW2 1772 aa20.31■□□□□ 0.84
CAPN12-202ENST00000593700 FAM135BQ49AJ0 1406 aa20.3■□□□□ 0.84
CAPN12-202ENST00000593700 MYOM1P52179 1685 aa20.3■□□□□ 0.84
CAPN12-202ENST00000593700 METP08581 1390 aa20.3■□□□□ 0.84
CAPN12-202ENST00000593700 LRRC7Q96NW7 1537 aa20.29■□□□□ 0.84
CAPN12-202ENST00000593700 STK26Q9P289 416 aa20.29■□□□□ 0.84
CAPN12-202ENST00000593700 DISP3Q9P2K9 1392 aa20.29■□□□□ 0.84
CAPN12-202ENST00000593700 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
CAPN12-202ENST00000593700 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
CAPN12-202ENST00000593700 POGKQ9P215 609 aa20.28■□□□□ 0.84
CAPN12-202ENST00000593700 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
CAPN12-202ENST00000593700 PTCH1Q13635 1447 aa20.27■□□□□ 0.84
CAPN12-202ENST00000593700 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.84
CAPN12-202ENST00000593700 ADGRB2O60241 1585 aa20.26■□□□□ 0.83
CAPN12-202ENST00000593700 TULP4Q9NRJ4 1543 aa20.25■□□□□ 0.83
CAPN12-202ENST00000593700 C11orf95C9JLR9 678 aaPredicted RBP20.24■□□□□ 0.83
CAPN12-202ENST00000593700 SIRT1Q96EB6 747 aa20.24■□□□□ 0.83
CAPN12-202ENST00000593700 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
CAPN12-202ENST00000593700 EVC2Q86UK5 1308 aa20.24■□□□□ 0.83
CAPN12-202ENST00000593700 FBXO41Q8TF61 875 aa20.23■□□□□ 0.83
CAPN12-202ENST00000593700 PRAM1Q96QH2 718 aa20.23■□□□□ 0.83
CAPN12-202ENST00000593700 TMEM94Q12767 1356 aa20.22■□□□□ 0.83
CAPN12-202ENST00000593700 TOM1O60784 492 aa20.22■□□□□ 0.83
CAPN12-202ENST00000593700 ITSN1Q15811 1721 aa20.21■□□□□ 0.83
CAPN12-202ENST00000593700 ZNF219Q9P2Y4 722 aaPredicted RBP20.2■□□□□ 0.82
CAPN12-202ENST00000593700 MSH6P52701 1360 aa20.2■□□□□ 0.82
CAPN12-202ENST00000593700 PUS7Q96PZ0 661 aaKnown RBP20.19■□□□□ 0.82
CAPN12-202ENST00000593700 NINLQ9Y2I6 1382 aa20.18■□□□□ 0.82
CAPN12-202ENST00000593700 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
CAPN12-202ENST00000593700 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.17■□□□□ 0.82
CAPN12-202ENST00000593700 SAFB2Q14151 953 aaKnown RBP eCLIP20.17■□□□□ 0.82
CAPN12-202ENST00000593700 ATAD2Q6PL18 1390 aa20.17■□□□□ 0.82
CAPN12-202ENST00000593700 DCCP43146 1447 aa20.17■□□□□ 0.82
CAPN12-202ENST00000593700 C14orf37Q86TY3 774 aa20.16■□□□□ 0.82
CAPN12-202ENST00000593700 MINK1Q8N4C8 1332 aaPredicted RBP20.16■□□□□ 0.82
CAPN12-202ENST00000593700 ROBO2Q9HCK4 1378 aa20.16■□□□□ 0.82
CAPN12-202ENST00000593700 NALCNQ8IZF0 1738 aa20.16■□□□□ 0.82
CAPN12-202ENST00000593700 UBAP1LF5GYI3 381 aa20.15■□□□□ 0.82
CAPN12-202ENST00000593700 ANP32CO43423 234 aa20.15■□□□□ 0.82
CAPN12-202ENST00000593700 C19orf44Q9H6X5 657 aa20.15■□□□□ 0.82
CAPN12-202ENST00000593700 PLEKHH1Q9ULM0 1364 aa20.14■□□□□ 0.81
CAPN12-202ENST00000593700 CADPS2Q86UW7 1296 aa20.13■□□□□ 0.81
CAPN12-202ENST00000593700 ADGRL3Q9HAR2 1447 aa20.12■□□□□ 0.81
CAPN12-202ENST00000593700 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
CAPN12-202ENST00000593700 TOPAZ1Q8N9V7 1692 aa20.12■□□□□ 0.81
CAPN12-202ENST00000593700 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
CAPN12-202ENST00000593700 FMN2Q9NZ56 1722 aa20.11■□□□□ 0.81
CAPN12-202ENST00000593700 WAPLQ7Z5K2 1190 aa20.11■□□□□ 0.81
CAPN12-202ENST00000593700 USP32Q8NFA0 1604 aa20.1■□□□□ 0.81
CAPN12-202ENST00000593700 ATF3P18847 181 aa20.1■□□□□ 0.81
CAPN12-202ENST00000593700 ILDR1Q86SU0 546 aaPredicted RBP20.08■□□□□ 0.81
CAPN12-202ENST00000593700 AKAP12Q02952 1782 aa20.08■□□□□ 0.8
CAPN12-202ENST00000593700 ATP7BP35670 1465 aa20.06■□□□□ 0.8
CAPN12-202ENST00000593700 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
CAPN12-202ENST00000593700 KTN1Q86UP2 1357 aaKnown RBP20.06■□□□□ 0.8
CAPN12-202ENST00000593700 KIF20BQ96Q89 1820 aa20.05■□□□□ 0.8
CAPN12-202ENST00000593700 CDK19Q9BWU1 502 aa20.05■□□□□ 0.8
CAPN12-202ENST00000593700 MON2Q7Z3U7 1717 aa20.05■□□□□ 0.8
CAPN12-202ENST00000593700 RGPD8O14715 1765 aaPredicted RBP20.04■□□□□ 0.8
CAPN12-202ENST00000593700 TMC1Q8TDI8 760 aa20.04■□□□□ 0.8
CAPN12-202ENST00000593700 RBM33Q96EV2 1170 aaKnown RBP20.04■□□□□ 0.8
CAPN12-202ENST00000593700 CABP2Q9NPB3 220 aa20.04■□□□□ 0.8
CAPN12-202ENST00000593700 ANKRD36BQ8N2N9 1353 aa20.04■□□□□ 0.8
CAPN12-202ENST00000593700 ANKRD26Q9UPS8 1709 aa20.04■□□□□ 0.8
CAPN12-202ENST00000593700 MIER1Q8N108 512 aa20.03■□□□□ 0.8
CAPN12-202ENST00000593700 PANK3Q9H999 370 aa20.03■□□□□ 0.8
CAPN12-202ENST00000593700 SLAIN2Q9P270 581 aa20.03■□□□□ 0.8
CAPN12-202ENST00000593700 ANKARQ7Z5J8 1434 aa20.02■□□□□ 0.79
CAPN12-202ENST00000593700 KNSTRNQ9Y448 316 aa20.01■□□□□ 0.79
CAPN12-202ENST00000593700 TERF2IPQ9NYB0 399 aa20■□□□□ 0.79
CAPN12-202ENST00000593700 PPIP5K1Q6PFW1 1433 aa20■□□□□ 0.79
CAPN12-202ENST00000593700 PIP4K2BP78356 416 aa19.99■□□□□ 0.79
CAPN12-202ENST00000593700 HDGFL2Q7Z4V5 671 aaPredicted RBP19.98■□□□□ 0.79
CAPN12-202ENST00000593700 NPC1L1Q9UHC9 1359 aa19.97■□□□□ 0.79
CAPN12-202ENST00000593700 MST1RQ04912 1400 aa19.97■□□□□ 0.79
CAPN12-202ENST00000593700 NSD3Q9BZ95 1437 aa19.97■□□□□ 0.79
CAPN12-202ENST00000593700 CCER2I3L3R5 266 aa19.96■□□□□ 0.79
CAPN12-202ENST00000593700 PRKRIP1Q9H875 184 aaPredicted RBP19.96■□□□□ 0.79
CAPN12-202ENST00000593700 KIF1AQ12756 1690 aa19.96■□□□□ 0.79
CAPN12-202ENST00000593700 A0A1W2PP64 1363 aa19.95■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms