RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 KNDC1Q76NI1 1749 aa24.52■■□□□ 1.52
LIG1-205ENST00000593425 ADAMTS2O95450 1211 aa24.52■■□□□ 1.52
LIG1-205ENST00000593425 QTRT2Q9H974 415 aaKnown RBP24.51■■□□□ 1.51
LIG1-205ENST00000593425 RGL3Q3MIN7 710 aa24.5■■□□□ 1.51
LIG1-205ENST00000593425 TECPR2O15040 1411 aa24.5■■□□□ 1.51
LIG1-205ENST00000593425 RBM6P78332 1123 aaKnown RBP24.49■■□□□ 1.51
LIG1-205ENST00000593425 MPHOSPH9Q99550 1183 aa24.49■■□□□ 1.51
LIG1-205ENST00000593425 PXDNQ92626 1479 aa24.48■■□□□ 1.51
LIG1-205ENST00000593425 NGLY1Q96IV0 654 aa24.48■■□□□ 1.51
LIG1-205ENST00000593425 PIK3C2GO75747 1445 aa24.47■■□□□ 1.51
LIG1-205ENST00000593425 ANKRD30BQ9BXX2 1392 aa24.47■■□□□ 1.51
LIG1-205ENST00000593425 LRPPRCP42704 1394 aaKnown RBP24.46■■□□□ 1.51
LIG1-205ENST00000593425 STK26Q9P289 416 aa24.46■■□□□ 1.51
LIG1-205ENST00000593425 PLEKHH1Q9ULM0 1364 aa24.45■■□□□ 1.5
LIG1-205ENST00000593425 MARF1Q9Y4F3 1742 aaKnown RBP24.45■■□□□ 1.5
LIG1-205ENST00000593425 ESCO1Q5FWF5 840 aa24.45■■□□□ 1.5
LIG1-205ENST00000593425 WAPLQ7Z5K2 1190 aa24.45■■□□□ 1.5
LIG1-205ENST00000593425 MYOM2P54296 1465 aa24.45■■□□□ 1.5
LIG1-205ENST00000593425 FMN2Q9NZ56 1722 aa24.44■■□□□ 1.5
LIG1-205ENST00000593425 NPHP3Q7Z494 1330 aa24.44■■□□□ 1.5
LIG1-205ENST00000593425 TMEM132EQ6IEE7 984 aa24.43■■□□□ 1.5
LIG1-205ENST00000593425 ABCC11Q96J66 1382 aa24.42■■□□□ 1.5
LIG1-205ENST00000593425 USP21Q9UK80 565 aa24.42■■□□□ 1.5
LIG1-205ENST00000593425 NUTM2FA1L443 756 aa24.41■■□□□ 1.5
LIG1-205ENST00000593425 XPCQ01831 940 aaPredicted RBP24.41■■□□□ 1.5
LIG1-205ENST00000593425 YTHDC2Q9H6S0 1430 aaKnown RBP24.4■■□□□ 1.5
LIG1-205ENST00000593425 FOXO3O43524 673 aa24.39■■□□□ 1.49
LIG1-205ENST00000593425 FNBP4Q8N3X1 1017 aaPredicted RBP24.39■■□□□ 1.49
LIG1-205ENST00000593425 ATRNO75882 1429 aa24.38■■□□□ 1.49
LIG1-205ENST00000593425 KIF1AQ12756 1690 aa24.38■■□□□ 1.49
LIG1-205ENST00000593425 TRPC5Q9UL62 973 aaPredicted RBP24.37■■□□□ 1.49
LIG1-205ENST00000593425 RGPD8O14715 1765 aaPredicted RBP24.37■■□□□ 1.49
LIG1-205ENST00000593425 NRXN1Q9ULB1 1477 aa24.36■■□□□ 1.49
LIG1-205ENST00000593425 BCL9LQ86UU0 1499 aa24.34■■□□□ 1.49
LIG1-205ENST00000593425 C14orf93Q9H972 538 aaKnown RBP24.32■■□□□ 1.48
LIG1-205ENST00000593425 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.31■■□□□ 1.48
LIG1-205ENST00000593425 ATAD2Q6PL18 1390 aa24.3■■□□□ 1.48
LIG1-205ENST00000593425 CFAP70Q5T0N1 1121 aa24.29■■□□□ 1.48
LIG1-205ENST00000593425 SPATA31A3Q5VYP0 1347 aa24.29■■□□□ 1.48
LIG1-205ENST00000593425 USP32Q8NFA0 1604 aa24.28■■□□□ 1.48
LIG1-205ENST00000593425 SIRT1Q96EB6 747 aa24.28■■□□□ 1.48
LIG1-205ENST00000593425 DHX57Q6P158 1386 aaKnown RBP24.26■■□□□ 1.47
LIG1-205ENST00000593425 ACIN1Q9UKV3 1341 aaKnown RBP24.25■■□□□ 1.47
LIG1-205ENST00000593425 RAB3GAP2Q9H2M9 1393 aa24.25■■□□□ 1.47
LIG1-205ENST00000593425 SLIT2O94813 1529 aa24.25■■□□□ 1.47
LIG1-205ENST00000593425 ABCA3Q99758 1704 aa24.24■■□□□ 1.47
LIG1-205ENST00000593425 KRT28Q7Z3Y7 464 aa24.24■■□□□ 1.47
LIG1-205ENST00000593425 GLI3P10071 1580 aa24.24■■□□□ 1.47
LIG1-205ENST00000593425 TNS3Q68CZ2 1445 aa24.23■■□□□ 1.47
LIG1-205ENST00000593425 DLC1Q96QB1 1528 aa24.23■■□□□ 1.47
LIG1-205ENST00000593425 ADGRB1O14514 1584 aa24.22■■□□□ 1.47
LIG1-205ENST00000593425 SAFB2Q14151 953 aaKnown RBP eCLIP24.22■■□□□ 1.47
LIG1-205ENST00000593425 GJD4Q96KN9 370 aaPredicted RBP24.22■■□□□ 1.47
LIG1-205ENST00000593425 PRAM1Q96QH2 718 aa24.22■■□□□ 1.47
LIG1-205ENST00000593425 PHF8Q9UPP1 1060 aa24.22■■□□□ 1.47
LIG1-205ENST00000593425 ADGRB2O60241 1585 aa24.21■■□□□ 1.47
LIG1-205ENST00000593425 PLCH1Q4KWH8 1693 aa24.21■■□□□ 1.47
LIG1-205ENST00000593425 RALGAPBQ86X10 1494 aa24.19■■□□□ 1.46
LIG1-205ENST00000593425 UNC5CLQ8IV45 518 aa24.18■■□□□ 1.46
LIG1-205ENST00000593425 BRWD3Q6RI45 1802 aa24.17■■□□□ 1.46
LIG1-205ENST00000593425 CABLES1Q8TDN4 633 aa24.16■■□□□ 1.46
LIG1-205ENST00000593425 ANKARQ7Z5J8 1434 aa24.16■■□□□ 1.46
LIG1-205ENST00000593425 SBNO1A3KN83 1393 aa24.16■■□□□ 1.46
LIG1-205ENST00000593425 TRPM3Q9HCF6 1732 aaPredicted RBP24.15■■□□□ 1.46
LIG1-205ENST00000593425 NWD2Q9ULI1 1742 aa24.15■■□□□ 1.46
LIG1-205ENST00000593425 PSME1Q06323 249 aa24.15■■□□□ 1.46
LIG1-205ENST00000593425 PLEKHG5O94827 1062 aa24.14■■□□□ 1.45
LIG1-205ENST00000593425 POGKQ9P215 609 aa24.14■■□□□ 1.45
LIG1-205ENST00000593425 PMFBP1Q8TBY8 1022 aa24.13■■□□□ 1.45
LIG1-205ENST00000593425 EP400Q96L91 3159 aa24.13■■□□□ 1.45
LIG1-205ENST00000593425 HAP1P54257 671 aaPredicted RBP24.12■■□□□ 1.45
LIG1-205ENST00000593425 TRAK1Q9UPV9 953 aa24.11■■□□□ 1.45
LIG1-205ENST00000593425 ARHGEF10O15013 1369 aa24.11■■□□□ 1.45
LIG1-205ENST00000593425 ALS2Q96Q42 1657 aa24.11■■□□□ 1.45
LIG1-205ENST00000593425 LMOD2Q6P5Q4 547 aa24.1■■□□□ 1.45
LIG1-205ENST00000593425 HIRIP3Q9BW71 556 aaPredicted RBP24.1■■□□□ 1.45
LIG1-205ENST00000593425 NRAPQ86VF7 1730 aa24.1■■□□□ 1.45
LIG1-205ENST00000593425 TULP4Q9NRJ4 1543 aa24.09■■□□□ 1.45
LIG1-205ENST00000593425 PRR36Q9H6K5 1346 aa24.09■■□□□ 1.45
LIG1-205ENST00000593425 KDM2AQ9Y2K7 1162 aa24.08■■□□□ 1.45
LIG1-205ENST00000593425 MINK1Q8N4C8 1332 aaPredicted RBP24.08■■□□□ 1.44
LIG1-205ENST00000593425 ARHGEF28Q8N1W1 1705 aaKnown RBP24.07■■□□□ 1.44
LIG1-205ENST00000593425 VPS72Q15906 364 aa24.07■■□□□ 1.44
LIG1-205ENST00000593425 CCDC125Q86Z20 511 aa24.07■■□□□ 1.44
LIG1-205ENST00000593425 DCAF11Q8TEB1 546 aa24.06■■□□□ 1.44
LIG1-205ENST00000593425 CRYBG1Q9Y4K1 1723 aa24.06■■□□□ 1.44
LIG1-205ENST00000593425 BLMP54132 1417 aaPredicted RBP24.04■■□□□ 1.44
LIG1-205ENST00000593425 SEPT12Q8IYM1 358 aa24.04■■□□□ 1.44
LIG1-205ENST00000593425 ZRANB1Q9UGI0 708 aa24.03■■□□□ 1.44
LIG1-205ENST00000593425 EIF3AQ14152 1382 aaKnown RBP24.03■■□□□ 1.44
LIG1-205ENST00000593425 FAM83GA6ND36 823 aa24.02■■□□□ 1.44
LIG1-205ENST00000593425 CCDC9Q9Y3X0 531 aaKnown RBP24.02■■□□□ 1.44
LIG1-205ENST00000593425 ITSN1Q15811 1721 aa24.01■■□□□ 1.43
LIG1-205ENST00000593425 COL14A1Q05707 1796 aaKnown RBP24.01■■□□□ 1.43
LIG1-205ENST00000593425 WASLO00401 505 aaPredicted RBP24.01■■□□□ 1.43
LIG1-205ENST00000593425 GPRASP1Q5JY77 1395 aa24.01■■□□□ 1.43
LIG1-205ENST00000593425 ONECUT3O60422 494 aaPredicted RBP23.99■■□□□ 1.43
LIG1-205ENST00000593425 ATP7BP35670 1465 aa23.99■■□□□ 1.43
LIG1-205ENST00000593425 DEFB132Q7Z7B7 95 aa23.96■■□□□ 1.43
LIG1-205ENST00000593425 STAC3Q96MF2 364 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms