RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
CIRBP-242ENST00000593093 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
CIRBP-242ENST00000593093 A2MP01023 1474 aa17.88■□□□□ 0.45
CIRBP-242ENST00000593093 APBB1O00213 710 aa17.88■□□□□ 0.45
CIRBP-242ENST00000593093 ELL2O00472 640 aaPredicted RBP17.88■□□□□ 0.45
CIRBP-242ENST00000593093 GBP4Q96PP9 640 aa17.88■□□□□ 0.45
CIRBP-242ENST00000593093 GGT6Q6P531 493 aa17.87■□□□□ 0.45
CIRBP-242ENST00000593093 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
CIRBP-242ENST00000593093 ARHGEF12Q9NZN5 1544 aa17.87■□□□□ 0.45
CIRBP-242ENST00000593093 EXOSC9Q06265 439 aaKnown RBP17.87■□□□□ 0.45
CIRBP-242ENST00000593093 TRMT2AQ8IZ69 625 aaKnown RBP17.87■□□□□ 0.45
CIRBP-242ENST00000593093 TNPO1Q92973 898 aaKnown RBP17.87■□□□□ 0.45
CIRBP-242ENST00000593093 FAM13BQ9NYF5 915 aa17.87■□□□□ 0.45
CIRBP-242ENST00000593093 C1orf115Q9H7X2 142 aa17.86■□□□□ 0.45
CIRBP-242ENST00000593093 MSNP26038 577 aaKnown RBP17.86■□□□□ 0.45
CIRBP-242ENST00000593093 ANKRD45Q5TZF3 282 aa17.86■□□□□ 0.45
CIRBP-242ENST00000593093 ERBB4Q15303 1308 aa17.86■□□□□ 0.45
CIRBP-242ENST00000593093 MVPQ14764 893 aaKnown RBP17.85■□□□□ 0.45
CIRBP-242ENST00000593093 GAS2L3Q86XJ1 694 aa17.85■□□□□ 0.45
CIRBP-242ENST00000593093 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
CIRBP-242ENST00000593093 GOLGA6L22H0YM25 854 aa17.85■□□□□ 0.45
CIRBP-242ENST00000593093 KIAA1211Q6ZU35 1233 aa17.84■□□□□ 0.45
CIRBP-242ENST00000593093 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
CIRBP-242ENST00000593093 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
CIRBP-242ENST00000593093 TTC37Q6PGP7 1564 aa17.83■□□□□ 0.44
CIRBP-242ENST00000593093 FSD2A1L4K1 749 aa17.82■□□□□ 0.44
CIRBP-242ENST00000593093 TRAPPC8Q9Y2L5 1435 aa17.82■□□□□ 0.44
CIRBP-242ENST00000593093 FAM135AQ9P2D6 1515 aa17.82■□□□□ 0.44
CIRBP-242ENST00000593093 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
CIRBP-242ENST00000593093 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
CIRBP-242ENST00000593093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.81■□□□□ 0.44
CIRBP-242ENST00000593093 SAMD9LQ8IVG5 1584 aa17.81■□□□□ 0.44
CIRBP-242ENST00000593093 MPNDQ8N594 471 aa17.81■□□□□ 0.44
CIRBP-242ENST00000593093 R3HCC1Q9Y3T6 440 aaKnown RBP17.81■□□□□ 0.44
CIRBP-242ENST00000593093 NASPP49321 788 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-242ENST00000593093 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
CIRBP-242ENST00000593093 SCAPERQ9BY12 1400 aa17.8■□□□□ 0.44
CIRBP-242ENST00000593093 SSFA2P28290 1259 aa17.8■□□□□ 0.44
CIRBP-242ENST00000593093 FOXD4L6Q3SYB3 417 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-242ENST00000593093 FOXD4L3Q6VB84 417 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-242ENST00000593093 TMEM57Q8N5G2 664 aa17.79■□□□□ 0.44
CIRBP-242ENST00000593093 SSH1Q8WYL5 1049 aa17.79■□□□□ 0.44
CIRBP-242ENST00000593093 TRIM27P14373 513 aa17.79■□□□□ 0.44
CIRBP-242ENST00000593093 MCTP1Q6DN14 999 aa17.79■□□□□ 0.44
CIRBP-242ENST00000593093 ABCC2Q92887 1545 aa17.78■□□□□ 0.44
CIRBP-242ENST00000593093 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
CIRBP-242ENST00000593093 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
CIRBP-242ENST00000593093 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.44
CIRBP-242ENST00000593093 STK26Q9P289 416 aa17.77■□□□□ 0.44
CIRBP-242ENST00000593093 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
CIRBP-242ENST00000593093 DDX19BQ9UMR2 479 aa17.76■□□□□ 0.43
CIRBP-242ENST00000593093 PDIA4P13667 645 aaKnown RBP17.75■□□□□ 0.43
CIRBP-242ENST00000593093 ADCY10Q96PN6 1610 aa17.75■□□□□ 0.43
CIRBP-242ENST00000593093 ADGBQ8N7X0 1667 aa17.75■□□□□ 0.43
CIRBP-242ENST00000593093 ADGRF5Q8IZF2 1346 aa17.75■□□□□ 0.43
CIRBP-242ENST00000593093 KDM5DQ9BY66 1539 aa17.75■□□□□ 0.43
CIRBP-242ENST00000593093 NOL8Q76FK4 1167 aaKnown RBP17.75■□□□□ 0.43
CIRBP-242ENST00000593093 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
CIRBP-242ENST00000593093 GGNBP2Q9H3C7 697 aa17.74■□□□□ 0.43
CIRBP-242ENST00000593093 CDC42BPBQ9Y5S2 1711 aa17.74■□□□□ 0.43
CIRBP-242ENST00000593093 RAPGEF3O95398 923 aa17.74■□□□□ 0.43
CIRBP-242ENST00000593093 PTMAP06454 111 aaKnown RBP17.74■□□□□ 0.43
CIRBP-242ENST00000593093 DNTTIP2Q5QJE6 756 aaKnown RBP17.74■□□□□ 0.43
CIRBP-242ENST00000593093 RNF214Q8ND24 703 aa17.74■□□□□ 0.43
CIRBP-242ENST00000593093 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
CIRBP-242ENST00000593093 CD2BP2O95400 341 aaKnown RBP17.73■□□□□ 0.43
CIRBP-242ENST00000593093 PLCH2O75038 1416 aa17.73■□□□□ 0.43
CIRBP-242ENST00000593093 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
CIRBP-242ENST00000593093 RIPK4P57078 832 aa17.72■□□□□ 0.43
CIRBP-242ENST00000593093 XPCQ01831 940 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-242ENST00000593093 WDR63Q8IWG1 891 aa17.71■□□□□ 0.43
CIRBP-242ENST00000593093 INSRP06213 1382 aa17.71■□□□□ 0.43
CIRBP-242ENST00000593093 NSD3Q9BZ95 1437 aa17.71■□□□□ 0.43
CIRBP-242ENST00000593093 SHANK2Q9UPX8 1470 aa17.7■□□□□ 0.42
CIRBP-242ENST00000593093 PIK3C2GO75747 1445 aa17.7■□□□□ 0.42
CIRBP-242ENST00000593093 CHAMP1Q96JM3 812 aa17.7■□□□□ 0.42
CIRBP-242ENST00000593093 CABP2Q9NPB3 220 aa17.7■□□□□ 0.42
CIRBP-242ENST00000593093 SRPK2P78362 688 aaKnown RBP17.7■□□□□ 0.42
CIRBP-242ENST00000593093 NGEFQ8N5V2 710 aa17.7■□□□□ 0.42
CIRBP-242ENST00000593093 GAS2L2Q8NHY3 880 aa17.7■□□□□ 0.42
CIRBP-242ENST00000593093 ZHX1Q9UKY1 873 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-242ENST00000593093 SKOR2Q2VWA4 1001 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-242ENST00000593093 CHD1LQ86WJ1 897 aa17.69■□□□□ 0.42
CIRBP-242ENST00000593093 THUMPD2Q9BTF0 503 aaKnown RBP17.69■□□□□ 0.42
CIRBP-242ENST00000593093 PLCB2Q00722 1185 aa17.69■□□□□ 0.42
CIRBP-242ENST00000593093 IPO8O15397 1037 aaKnown RBP17.68■□□□□ 0.42
CIRBP-242ENST00000593093 PRPF40AO75400 957 aaKnown RBP17.68■□□□□ 0.42
CIRBP-242ENST00000593093 BBXQ8WY36 941 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-242ENST00000593093 NINLQ9Y2I6 1382 aa17.68■□□□□ 0.42
CIRBP-242ENST00000593093 CROCC2H7BZ55 1655 aa17.68■□□□□ 0.42
CIRBP-242ENST00000593093 K7ELQ4 463 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-242ENST00000593093 RBM27Q9P2N5 1060 aaKnown RBP17.68■□□□□ 0.42
CIRBP-242ENST00000593093 FBLN1P23142 703 aa17.67■□□□□ 0.42
CIRBP-242ENST00000593093 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
CIRBP-242ENST00000593093 PRDM10Q9NQV6 1147 aa17.67■□□□□ 0.42
CIRBP-242ENST00000593093 ZSCAN30Q86W11 494 aa17.67■□□□□ 0.42
CIRBP-242ENST00000593093 FANCAO15360 1455 aa17.67■□□□□ 0.42
CIRBP-242ENST00000593093 TPM2P07951 284 aa17.66■□□□□ 0.42
CIRBP-242ENST00000593093 ZCCHC11Q5TAX3 1644 aaKnown RBP17.66■□□□□ 0.42
CIRBP-242ENST00000593093 CCDC173Q0VFZ6 552 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms