RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 DDX17Q92841 729 aaKnown RBP20.34■□□□□ 0.85
APOC1-208ENST00000592535 LRP6O75581 1613 aa20.34■□□□□ 0.85
APOC1-208ENST00000592535 SPATA31A6Q5VVP1 1343 aa20.32■□□□□ 0.84
APOC1-208ENST00000592535 ORAI2Q96SN7 254 aa20.32■□□□□ 0.84
APOC1-208ENST00000592535 KDM2AQ9Y2K7 1162 aa20.32■□□□□ 0.84
APOC1-208ENST00000592535 DHX57Q6P158 1386 aaKnown RBP20.32■□□□□ 0.84
APOC1-208ENST00000592535 DCAF11Q8TEB1 546 aa20.31■□□□□ 0.84
APOC1-208ENST00000592535 FMN2Q9NZ56 1722 aa20.3■□□□□ 0.84
APOC1-208ENST00000592535 ADGRB1O14514 1584 aa20.29■□□□□ 0.84
APOC1-208ENST00000592535 SIRT1Q96EB6 747 aa20.28■□□□□ 0.84
APOC1-208ENST00000592535 LRRC59Q96AG4 307 aaKnown RBP20.27■□□□□ 0.84
APOC1-208ENST00000592535 DLC1Q96QB1 1528 aa20.27■□□□□ 0.83
APOC1-208ENST00000592535 NUTM2FA1L443 756 aa20.26■□□□□ 0.83
APOC1-208ENST00000592535 POTEAQ6S8J7 498 aa20.26■□□□□ 0.83
APOC1-208ENST00000592535 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
APOC1-208ENST00000592535 ESCO1Q5FWF5 840 aa20.25■□□□□ 0.83
APOC1-208ENST00000592535 SOS2Q07890 1332 aaPredicted RBP20.25■□□□□ 0.83
APOC1-208ENST00000592535 RGPD8O14715 1765 aaPredicted RBP20.24■□□□□ 0.83
APOC1-208ENST00000592535 NUTM2BA6NNL0 878 aaPredicted RBP20.24■□□□□ 0.83
APOC1-208ENST00000592535 NUTM2EB1AL46 878 aaPredicted RBP20.24■□□□□ 0.83
APOC1-208ENST00000592535 MEX3CQ5U5Q3 659 aaKnown RBP20.24■□□□□ 0.83
APOC1-208ENST00000592535 NUTM2AQ8IVF1 878 aaPredicted RBP20.24■□□□□ 0.83
APOC1-208ENST00000592535 STAC3Q96MF2 364 aa20.24■□□□□ 0.83
APOC1-208ENST00000592535 PRAM1Q96QH2 718 aa20.24■□□□□ 0.83
APOC1-208ENST00000592535 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
APOC1-208ENST00000592535 TRAK1Q9UPV9 953 aa20.21■□□□□ 0.83
APOC1-208ENST00000592535 POGKQ9P215 609 aa20.2■□□□□ 0.82
APOC1-208ENST00000592535 KIF1AQ12756 1690 aa20.19■□□□□ 0.82
APOC1-208ENST00000592535 PXDNQ92626 1479 aa20.19■□□□□ 0.82
APOC1-208ENST00000592535 NPHP3Q7Z494 1330 aa20.19■□□□□ 0.82
APOC1-208ENST00000592535 ADGRB2O60241 1585 aa20.18■□□□□ 0.82
APOC1-208ENST00000592535 FOXO3O43524 673 aa20.18■□□□□ 0.82
APOC1-208ENST00000592535 ARHGEF28Q8N1W1 1705 aaKnown RBP20.18■□□□□ 0.82
APOC1-208ENST00000592535 KIAA1210Q9ULL0 1709 aa20.18■□□□□ 0.82
APOC1-208ENST00000592535 COL22A1Q8NFW1 1626 aaPredicted RBP20.17■□□□□ 0.82
APOC1-208ENST00000592535 XPCQ01831 940 aaPredicted RBP20.17■□□□□ 0.82
APOC1-208ENST00000592535 USP32Q8NFA0 1604 aa20.16■□□□□ 0.82
APOC1-208ENST00000592535 ZNF772Q68DY9 489 aaPredicted RBP20.14■□□□□ 0.81
APOC1-208ENST00000592535 MINK1Q8N4C8 1332 aaPredicted RBP20.13■□□□□ 0.81
APOC1-208ENST00000592535 HIRIP3Q9BW71 556 aaPredicted RBP20.13■□□□□ 0.81
APOC1-208ENST00000592535 AFF2P51816 1311 aa20.12■□□□□ 0.81
APOC1-208ENST00000592535 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
APOC1-208ENST00000592535 C8orf37Q96NL8 207 aa20.11■□□□□ 0.81
APOC1-208ENST00000592535 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
APOC1-208ENST00000592535 PHF8Q9UPP1 1060 aa20.11■□□□□ 0.81
APOC1-208ENST00000592535 ANKARQ7Z5J8 1434 aa20.1■□□□□ 0.81
APOC1-208ENST00000592535 MARF1Q9Y4F3 1742 aaKnown RBP20.09■□□□□ 0.81
APOC1-208ENST00000592535 KRT28Q7Z3Y7 464 aa20.08■□□□□ 0.81
APOC1-208ENST00000592535 TULP4Q9NRJ4 1543 aa20.07■□□□□ 0.8
APOC1-208ENST00000592535 NBPF1Q3BBV0 1214 aa20.07■□□□□ 0.8
APOC1-208ENST00000592535 L3MBTL2Q969R5 705 aa20.07■□□□□ 0.8
APOC1-208ENST00000592535 SPATA31A3Q5VYP0 1347 aa20.06■□□□□ 0.8
APOC1-208ENST00000592535 PRR36Q9H6K5 1346 aa20.06■□□□□ 0.8
APOC1-208ENST00000592535 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
APOC1-208ENST00000592535 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
APOC1-208ENST00000592535 EIF3AQ14152 1382 aaKnown RBP20.06■□□□□ 0.8
APOC1-208ENST00000592535 NEUROD1Q13562 356 aa20.05■□□□□ 0.8
APOC1-208ENST00000592535 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
APOC1-208ENST00000592535 TNS3Q68CZ2 1445 aa20.03■□□□□ 0.8
APOC1-208ENST00000592535 ITSN1Q15811 1721 aa20.03■□□□□ 0.8
APOC1-208ENST00000592535 RXRBP28702 533 aa20.03■□□□□ 0.8
APOC1-208ENST00000592535 TRIM26Q12899 539 aaPredicted RBP20.03■□□□□ 0.8
APOC1-208ENST00000592535 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.8
APOC1-208ENST00000592535 TRPM3Q9HCF6 1732 aaPredicted RBP20.02■□□□□ 0.8
APOC1-208ENST00000592535 PSME1Q06323 249 aa20.02■□□□□ 0.8
APOC1-208ENST00000592535 ATP7BP35670 1465 aa20■□□□□ 0.79
APOC1-208ENST00000592535 SBNO1A3KN83 1393 aa20■□□□□ 0.79
APOC1-208ENST00000592535 ABCA3Q99758 1704 aa20■□□□□ 0.79
APOC1-208ENST00000592535 QTRT2Q9H974 415 aaKnown RBP20■□□□□ 0.79
APOC1-208ENST00000592535 CDK12Q9NYV4 1490 aaPredicted RBP19.99■□□□□ 0.79
APOC1-208ENST00000592535 TOPAZ1Q8N9V7 1692 aa19.98■□□□□ 0.79
APOC1-208ENST00000592535 QRICH2Q9H0J4 1663 aa19.98■□□□□ 0.79
APOC1-208ENST00000592535 FNBP4Q8N3X1 1017 aaPredicted RBP19.98■□□□□ 0.79
APOC1-208ENST00000592535 USP21Q9UK80 565 aa19.98■□□□□ 0.79
APOC1-208ENST00000592535 ALS2Q96Q42 1657 aa19.97■□□□□ 0.79
APOC1-208ENST00000592535 NUDT16Q96DE0 195 aaKnown RBP19.97■□□□□ 0.79
APOC1-208ENST00000592535 CDK19Q9BWU1 502 aa19.97■□□□□ 0.79
APOC1-208ENST00000592535 RBM6P78332 1123 aaKnown RBP19.96■□□□□ 0.79
APOC1-208ENST00000592535 LMOD2Q6P5Q4 547 aa19.96■□□□□ 0.79
APOC1-208ENST00000592535 CENPJQ9HC77 1338 aaPredicted RBP19.96■□□□□ 0.79
APOC1-208ENST00000592535 ARHGEF10O15013 1369 aa19.95■□□□□ 0.79
APOC1-208ENST00000592535 GPRASP1Q5JY77 1395 aa19.95■□□□□ 0.79
APOC1-208ENST00000592535 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
APOC1-208ENST00000592535 CABLES1Q8TDN4 633 aa19.95■□□□□ 0.78
APOC1-208ENST00000592535 RGS12O14924 1447 aa19.94■□□□□ 0.78
APOC1-208ENST00000592535 NGDNQ8NEJ9 315 aaKnown RBP19.94■□□□□ 0.78
APOC1-208ENST00000592535 ATRNO75882 1429 aa19.93■□□□□ 0.78
APOC1-208ENST00000592535 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.93■□□□□ 0.78
APOC1-208ENST00000592535 BCL9LQ86UU0 1499 aa19.93■□□□□ 0.78
APOC1-208ENST00000592535 HAP1P54257 671 aaPredicted RBP19.93■□□□□ 0.78
APOC1-208ENST00000592535 TRPC5Q9UL62 973 aaPredicted RBP19.93■□□□□ 0.78
APOC1-208ENST00000592535 PLCH1Q4KWH8 1693 aa19.91■□□□□ 0.78
APOC1-208ENST00000592535 NBPF8Q3BBV2 869 aa19.91■□□□□ 0.78
APOC1-208ENST00000592535 ROCK2O75116 1388 aaKnown RBP19.91■□□□□ 0.78
APOC1-208ENST00000592535 SLIT2O94813 1529 aa19.91■□□□□ 0.78
APOC1-208ENST00000592535 CRYBG1Q9Y4K1 1723 aa19.9■□□□□ 0.78
APOC1-208ENST00000592535 CCDC61Q9Y6R9 512 aa19.89■□□□□ 0.77
APOC1-208ENST00000592535 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
APOC1-208ENST00000592535 PAK3O75914 559 aaPredicted RBP19.88■□□□□ 0.77
APOC1-208ENST00000592535 SRPK2P78362 688 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms