RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 PXDNQ92626 1479 aa22.51■■□□□ 1.19
SF3A2-206ENST00000592314 IFT172Q9UG01 1749 aa22.51■■□□□ 1.19
SF3A2-206ENST00000592314 ATRNO75882 1429 aa22.49■■□□□ 1.19
SF3A2-206ENST00000592314 VGFO15240 615 aaPredicted RBP22.49■■□□□ 1.19
SF3A2-206ENST00000592314 USP21Q9UK80 565 aa22.46■■□□□ 1.19
SF3A2-206ENST00000592314 KNDC1Q76NI1 1749 aa22.45■■□□□ 1.19
SF3A2-206ENST00000592314 FNBP4Q8N3X1 1017 aaPredicted RBP22.45■■□□□ 1.18
SF3A2-206ENST00000592314 RPGRIP1LQ68CZ1 1315 aa22.45■■□□□ 1.18
SF3A2-206ENST00000592314 BCL9LQ86UU0 1499 aa22.44■■□□□ 1.18
SF3A2-206ENST00000592314 FMN2Q9NZ56 1722 aa22.43■■□□□ 1.18
SF3A2-206ENST00000592314 TECPR2O15040 1411 aa22.43■■□□□ 1.18
SF3A2-206ENST00000592314 ATAD2Q6PL18 1390 aa22.43■■□□□ 1.18
SF3A2-206ENST00000592314 FOXD1Q16676 465 aa22.43■■□□□ 1.18
SF3A2-206ENST00000592314 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.43■■□□□ 1.18
SF3A2-206ENST00000592314 SLC4A1APQ9BWU0 796 aaKnown RBP22.42■■□□□ 1.18
SF3A2-206ENST00000592314 ADGRF5Q8IZF2 1346 aa22.41■■□□□ 1.18
SF3A2-206ENST00000592314 XPCQ01831 940 aaPredicted RBP22.41■■□□□ 1.18
SF3A2-206ENST00000592314 TRPC5Q9UL62 973 aaPredicted RBP22.41■■□□□ 1.18
SF3A2-206ENST00000592314 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
SF3A2-206ENST00000592314 PLEKHH1Q9ULM0 1364 aa22.39■■□□□ 1.18
SF3A2-206ENST00000592314 NPHP3Q7Z494 1330 aa22.39■■□□□ 1.18
SF3A2-206ENST00000592314 ESCO1Q5FWF5 840 aa22.39■■□□□ 1.17
SF3A2-206ENST00000592314 GLI3P10071 1580 aa22.38■■□□□ 1.17
SF3A2-206ENST00000592314 RGPD8O14715 1765 aaPredicted RBP22.38■■□□□ 1.17
SF3A2-206ENST00000592314 WAPLQ7Z5K2 1190 aa22.37■■□□□ 1.17
SF3A2-206ENST00000592314 NUTM2FA1L443 756 aa22.36■■□□□ 1.17
SF3A2-206ENST00000592314 FOXO3O43524 673 aa22.36■■□□□ 1.17
SF3A2-206ENST00000592314 KIF1AQ12756 1690 aa22.36■■□□□ 1.17
SF3A2-206ENST00000592314 BRWD3Q6RI45 1802 aa22.36■■□□□ 1.17
SF3A2-206ENST00000592314 PIK3C2GO75747 1445 aa22.35■■□□□ 1.17
SF3A2-206ENST00000592314 LRPPRCP42704 1394 aaKnown RBP22.35■■□□□ 1.17
SF3A2-206ENST00000592314 USP32Q8NFA0 1604 aa22.35■■□□□ 1.17
SF3A2-206ENST00000592314 STK26Q9P289 416 aa22.34■■□□□ 1.17
SF3A2-206ENST00000592314 ABCA3Q99758 1704 aa22.34■■□□□ 1.17
SF3A2-206ENST00000592314 CCDC144AA2RUR9 1427 aa22.33■■□□□ 1.17
SF3A2-206ENST00000592314 SLIT2O94813 1529 aa22.32■■□□□ 1.16
SF3A2-206ENST00000592314 RALGAPBQ86X10 1494 aa22.31■■□□□ 1.16
SF3A2-206ENST00000592314 ABCC11Q96J66 1382 aa22.31■■□□□ 1.16
SF3A2-206ENST00000592314 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
SF3A2-206ENST00000592314 PLCH1Q4KWH8 1693 aa22.3■■□□□ 1.16
SF3A2-206ENST00000592314 RGL3Q3MIN7 710 aa22.3■■□□□ 1.16
SF3A2-206ENST00000592314 YTHDC2Q9H6S0 1430 aaKnown RBP22.29■■□□□ 1.16
SF3A2-206ENST00000592314 ANKRD30BQ9BXX2 1392 aa22.28■■□□□ 1.16
SF3A2-206ENST00000592314 GJD4Q96KN9 370 aaPredicted RBP22.28■■□□□ 1.16
SF3A2-206ENST00000592314 SPATA31A3Q5VYP0 1347 aa22.28■■□□□ 1.16
SF3A2-206ENST00000592314 NRXN1Q9ULB1 1477 aa22.24■■□□□ 1.15
SF3A2-206ENST00000592314 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
SF3A2-206ENST00000592314 NWD2Q9ULI1 1742 aa22.23■■□□□ 1.15
SF3A2-206ENST00000592314 UNC5CLQ8IV45 518 aa22.23■■□□□ 1.15
SF3A2-206ENST00000592314 MPHOSPH9Q99550 1183 aa22.21■■□□□ 1.15
SF3A2-206ENST00000592314 ZRANB1Q9UGI0 708 aa22.21■■□□□ 1.15
SF3A2-206ENST00000592314 NRAPQ86VF7 1730 aa22.2■■□□□ 1.14
SF3A2-206ENST00000592314 KRT28Q7Z3Y7 464 aa22.19■■□□□ 1.14
SF3A2-206ENST00000592314 CABLES1Q8TDN4 633 aa22.19■■□□□ 1.14
SF3A2-206ENST00000592314 BLMP54132 1417 aaPredicted RBP22.19■■□□□ 1.14
SF3A2-206ENST00000592314 TRPM3Q9HCF6 1732 aaPredicted RBP22.19■■□□□ 1.14
SF3A2-206ENST00000592314 CCDC125Q86Z20 511 aa22.17■■□□□ 1.14
SF3A2-206ENST00000592314 ADGRB2O60241 1585 aa22.16■■□□□ 1.14
SF3A2-206ENST00000592314 C14orf93Q9H972 538 aaKnown RBP22.15■■□□□ 1.14
SF3A2-206ENST00000592314 PHF8Q9UPP1 1060 aa22.15■■□□□ 1.14
SF3A2-206ENST00000592314 ALS2Q96Q42 1657 aa22.14■■□□□ 1.14
SF3A2-206ENST00000592314 ADGRB1O14514 1584 aa22.14■■□□□ 1.13
SF3A2-206ENST00000592314 CFAP70Q5T0N1 1121 aa22.14■■□□□ 1.13
SF3A2-206ENST00000592314 DEFB132Q7Z7B7 95 aa22.14■■□□□ 1.13
SF3A2-206ENST00000592314 SIRT1Q96EB6 747 aa22.14■■□□□ 1.13
SF3A2-206ENST00000592314 DLC1Q96QB1 1528 aa22.14■■□□□ 1.13
SF3A2-206ENST00000592314 CRYBG1Q9Y4K1 1723 aa22.14■■□□□ 1.13
SF3A2-206ENST00000592314 PLEKHG5O94827 1062 aa22.13■■□□□ 1.13
SF3A2-206ENST00000592314 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
SF3A2-206ENST00000592314 SAFB2Q14151 953 aaKnown RBP eCLIP22.12■■□□□ 1.13
SF3A2-206ENST00000592314 VPS72Q15906 364 aa22.12■■□□□ 1.13
SF3A2-206ENST00000592314 SEPT12Q8IYM1 358 aa22.12■■□□□ 1.13
SF3A2-206ENST00000592314 PRAM1Q96QH2 718 aa22.11■■□□□ 1.13
SF3A2-206ENST00000592314 DHX57Q6P158 1386 aaKnown RBP22.09■■□□□ 1.13
SF3A2-206ENST00000592314 LRP5O75197 1615 aa22.09■■□□□ 1.13
SF3A2-206ENST00000592314 ANKARQ7Z5J8 1434 aa22.08■■□□□ 1.13
SF3A2-206ENST00000592314 ARHGEF10O15013 1369 aa22.08■■□□□ 1.12
SF3A2-206ENST00000592314 ONECUT3O60422 494 aaPredicted RBP22.07■■□□□ 1.12
SF3A2-206ENST00000592314 PMFBP1Q8TBY8 1022 aa22.07■■□□□ 1.12
SF3A2-206ENST00000592314 FAM83GA6ND36 823 aa22.06■■□□□ 1.12
SF3A2-206ENST00000592314 HAP1P54257 671 aaPredicted RBP22.06■■□□□ 1.12
SF3A2-206ENST00000592314 PSME1Q06323 249 aa22.06■■□□□ 1.12
SF3A2-206ENST00000592314 COL14A1Q05707 1796 aaKnown RBP22.06■■□□□ 1.12
SF3A2-206ENST00000592314 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
SF3A2-206ENST00000592314 PRR36Q9H6K5 1346 aa22.05■■□□□ 1.12
SF3A2-206ENST00000592314 TULP4Q9NRJ4 1543 aa22.03■■□□□ 1.12
SF3A2-206ENST00000592314 KRT27Q7Z3Y8 459 aa22.03■■□□□ 1.12
SF3A2-206ENST00000592314 THSD7AQ9UPZ6 1657 aa22.03■■□□□ 1.12
SF3A2-206ENST00000592314 TNS1Q9HBL0 1735 aaKnown RBP22.03■■□□□ 1.12
SF3A2-206ENST00000592314 HIRIP3Q9BW71 556 aaPredicted RBP22.02■■□□□ 1.12
SF3A2-206ENST00000592314 CCDC9Q9Y3X0 531 aaKnown RBP22.02■■□□□ 1.12
SF3A2-206ENST00000592314 RGPD1P0DJD0 1748 aa22.01■■□□□ 1.11
SF3A2-206ENST00000592314 ARHGEF28Q8N1W1 1705 aaKnown RBP22.01■■□□□ 1.11
SF3A2-206ENST00000592314 FAM98CQ17RN3 349 aaKnown RBP21.99■■□□□ 1.11
SF3A2-206ENST00000592314 PHRF1Q9P1Y6 1649 aaKnown RBP21.98■■□□□ 1.11
SF3A2-206ENST00000592314 BTG4Q9NY30 223 aa21.98■■□□□ 1.11
SF3A2-206ENST00000592314 POGKQ9P215 609 aa21.98■■□□□ 1.11
SF3A2-206ENST00000592314 TRAK1Q9UPV9 953 aa21.98■■□□□ 1.11
SF3A2-206ENST00000592314 ACIN1Q9UKV3 1341 aaKnown RBP21.98■■□□□ 1.11
SF3A2-206ENST00000592314 SF3B2Q13435 895 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms