RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 PPLO60437 1756 aa16.5■□□□□ 0.23
LINC00662-206ENST00000590523 RPGRIP1LQ68CZ1 1315 aa16.49■□□□□ 0.23
LINC00662-206ENST00000590523 VIRMAQ69YN4 1812 aaKnown RBP16.48■□□□□ 0.23
LINC00662-206ENST00000590523 QRICH2Q9H0J4 1663 aa16.48■□□□□ 0.23
LINC00662-206ENST00000590523 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
LINC00662-206ENST00000590523 PUS7Q96PZ0 661 aaKnown RBP16.48■□□□□ 0.23
LINC00662-206ENST00000590523 LAS1LQ9Y4W2 734 aaKnown RBP16.48■□□□□ 0.23
LINC00662-206ENST00000590523 NOS1P29475 1434 aa16.48■□□□□ 0.23
LINC00662-206ENST00000590523 C8orf34Q49A92 452 aa16.47■□□□□ 0.23
LINC00662-206ENST00000590523 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
LINC00662-206ENST00000590523 SHPRHQ149N8 1683 aa16.47■□□□□ 0.23
LINC00662-206ENST00000590523 C14orf93Q9H972 538 aaKnown RBP16.46■□□□□ 0.22
LINC00662-206ENST00000590523 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.22
LINC00662-206ENST00000590523 NSD3Q9BZ95 1437 aa16.45■□□□□ 0.22
LINC00662-206ENST00000590523 MORC1Q86VD1 984 aa16.45■□□□□ 0.22
LINC00662-206ENST00000590523 WWC1Q8IX03 1113 aa16.45■□□□□ 0.22
LINC00662-206ENST00000590523 ADGRB1O14514 1584 aa16.44■□□□□ 0.22
LINC00662-206ENST00000590523 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
LINC00662-206ENST00000590523 SKAP1Q86WV1 359 aa16.44■□□□□ 0.22
LINC00662-206ENST00000590523 RUNDC1Q96C34 613 aa16.44■□□□□ 0.22
LINC00662-206ENST00000590523 MLH3Q9UHC1 1453 aa16.44■□□□□ 0.22
LINC00662-206ENST00000590523 NSD2O96028 1365 aa16.44■□□□□ 0.22
LINC00662-206ENST00000590523 BCAR3O75815 825 aa16.44■□□□□ 0.22
LINC00662-206ENST00000590523 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
LINC00662-206ENST00000590523 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
LINC00662-206ENST00000590523 ZMYM3Q14202 1370 aa16.42■□□□□ 0.22
LINC00662-206ENST00000590523 HECW2Q9P2P5 1572 aa16.42■□□□□ 0.22
LINC00662-206ENST00000590523 CCDC27Q2M243 656 aa16.42■□□□□ 0.22
LINC00662-206ENST00000590523 IQSEC2Q5JU85 1478 aa16.42■□□□□ 0.22
LINC00662-206ENST00000590523 NPATQ14207 1427 aa16.42■□□□□ 0.22
LINC00662-206ENST00000590523 CANXP27824 592 aaKnown RBP16.41■□□□□ 0.22
LINC00662-206ENST00000590523 CLUAP1Q96AJ1 413 aa16.41■□□□□ 0.22
LINC00662-206ENST00000590523 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
LINC00662-206ENST00000590523 POGZQ7Z3K3 1410 aa16.41■□□□□ 0.22
LINC00662-206ENST00000590523 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.4■□□□□ 0.22
LINC00662-206ENST00000590523 DIP2BQ9P265 1576 aa16.4■□□□□ 0.22
LINC00662-206ENST00000590523 GLI2P10070 1586 aa16.39■□□□□ 0.22
LINC00662-206ENST00000590523 RGS3P49796 1198 aa16.39■□□□□ 0.21
LINC00662-206ENST00000590523 NFKBIBQ15653 356 aa16.39■□□□□ 0.21
LINC00662-206ENST00000590523 PMFBP1Q8TBY8 1022 aa16.39■□□□□ 0.21
LINC00662-206ENST00000590523 FRMPD1Q5SYB0 1578 aa16.39■□□□□ 0.21
LINC00662-206ENST00000590523 FAM43AQ8N2R8 423 aa16.38■□□□□ 0.21
LINC00662-206ENST00000590523 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
LINC00662-206ENST00000590523 TRAK1Q9UPV9 953 aa16.38■□□□□ 0.21
LINC00662-206ENST00000590523 ABCC3O15438 1527 aa16.38■□□□□ 0.21
LINC00662-206ENST00000590523 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
LINC00662-206ENST00000590523 BRPF3Q9ULD4 1205 aa16.38■□□□□ 0.21
LINC00662-206ENST00000590523 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
LINC00662-206ENST00000590523 EVC2Q86UK5 1308 aa16.37■□□□□ 0.21
LINC00662-206ENST00000590523 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
LINC00662-206ENST00000590523 TCP11L2Q8N4U5 519 aa16.36■□□□□ 0.21
LINC00662-206ENST00000590523 PIK3C2BO00750 1634 aa16.36■□□□□ 0.21
LINC00662-206ENST00000590523 CAMSAP1Q5T5Y3 1602 aa16.36■□□□□ 0.21
LINC00662-206ENST00000590523 ARHGEF28Q8N1W1 1705 aaKnown RBP16.36■□□□□ 0.21
LINC00662-206ENST00000590523 RARSP54136 660 aaKnown RBP16.36■□□□□ 0.21
LINC00662-206ENST00000590523 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
LINC00662-206ENST00000590523 NEO1Q92859 1461 aa16.35■□□□□ 0.21
LINC00662-206ENST00000590523 IGHDP01880 384 aa16.35■□□□□ 0.21
LINC00662-206ENST00000590523 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
LINC00662-206ENST00000590523 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
LINC00662-206ENST00000590523 CFAP65Q6ZU64 1925 aaKnown RBP16.35■□□□□ 0.21
LINC00662-206ENST00000590523 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
LINC00662-206ENST00000590523 RAPGEF3O95398 923 aa16.34■□□□□ 0.21
LINC00662-206ENST00000590523 COG6Q9Y2V7 657 aa16.33■□□□□ 0.21
LINC00662-206ENST00000590523 ADGRB2O60241 1585 aa16.33■□□□□ 0.2
LINC00662-206ENST00000590523 ADRA2BP18089 450 aa16.33■□□□□ 0.2
LINC00662-206ENST00000590523 MTHFSP49914 203 aa16.33■□□□□ 0.2
LINC00662-206ENST00000590523 PANK1Q8TE04 598 aa16.33■□□□□ 0.2
LINC00662-206ENST00000590523 FRAT1Q92837 279 aaPredicted RBP16.33■□□□□ 0.2
LINC00662-206ENST00000590523 ZFYVE9O95405 1425 aa16.32■□□□□ 0.2
LINC00662-206ENST00000590523 NEXMIFQ5QGS0 1516 aa16.32■□□□□ 0.2
LINC00662-206ENST00000590523 BECN1Q14457 450 aa16.31■□□□□ 0.2
LINC00662-206ENST00000590523 ARHGAP31Q2M1Z3 1444 aa16.31■□□□□ 0.2
LINC00662-206ENST00000590523 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
LINC00662-206ENST00000590523 TSPOAP1O95153 1857 aa16.3■□□□□ 0.2
LINC00662-206ENST00000590523 GGT6Q6P531 493 aa16.3■□□□□ 0.2
LINC00662-206ENST00000590523 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
LINC00662-206ENST00000590523 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
LINC00662-206ENST00000590523 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
LINC00662-206ENST00000590523 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
LINC00662-206ENST00000590523 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
LINC00662-206ENST00000590523 SIGLEC1Q9BZZ2 1709 aa16.29■□□□□ 0.2
LINC00662-206ENST00000590523 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
LINC00662-206ENST00000590523 UPF2Q9HAU5 1272 aaKnown RBP16.28■□□□□ 0.2
LINC00662-206ENST00000590523 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
LINC00662-206ENST00000590523 KIF13AQ9H1H9 1805 aa16.27■□□□□ 0.2
LINC00662-206ENST00000590523 MED14O60244 1454 aa16.27■□□□□ 0.19
LINC00662-206ENST00000590523 ANKRD26Q9UPS8 1709 aa16.27■□□□□ 0.19
LINC00662-206ENST00000590523 ABCC11Q96J66 1382 aa16.27■□□□□ 0.19
LINC00662-206ENST00000590523 USP19O94966 1318 aa16.27■□□□□ 0.19
LINC00662-206ENST00000590523 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
LINC00662-206ENST00000590523 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC00662-206ENST00000590523 SLC52A1Q9NWF4 448 aa16.25■□□□□ 0.19
LINC00662-206ENST00000590523 ZKSCAN2Q63HK3 967 aa16.25■□□□□ 0.19
LINC00662-206ENST00000590523 ATAD2Q6PL18 1390 aa16.24■□□□□ 0.19
LINC00662-206ENST00000590523 IL16Q14005 1332 aa16.24■□□□□ 0.19
LINC00662-206ENST00000590523 EIF5BO60841 1220 aaKnown RBP16.24■□□□□ 0.19
LINC00662-206ENST00000590523 MVPQ14764 893 aaKnown RBP16.24■□□□□ 0.19
LINC00662-206ENST00000590523 DIP2CQ9Y2E4 1556 aa16.24■□□□□ 0.19
LINC00662-206ENST00000590523 CLTCQ00610 1675 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms