RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 WDR63Q8IWG1 891 aa16■□□□□ 0.15
PDE4A-207ENST00000590407 NSD3Q9BZ95 1437 aa16■□□□□ 0.15
PDE4A-207ENST00000590407 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
PDE4A-207ENST00000590407 NSD2O96028 1365 aa16■□□□□ 0.15
PDE4A-207ENST00000590407 RUNDC1Q96C34 613 aa16■□□□□ 0.15
PDE4A-207ENST00000590407 DAXXQ9UER7 740 aaPredicted RBP16■□□□□ 0.15
PDE4A-207ENST00000590407 MLH3Q9UHC1 1453 aa15.99■□□□□ 0.15
PDE4A-207ENST00000590407 ASXL2Q76L83 1435 aa15.98■□□□□ 0.15
PDE4A-207ENST00000590407 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
PDE4A-207ENST00000590407 CLUAP1Q96AJ1 413 aa15.98■□□□□ 0.15
PDE4A-207ENST00000590407 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
PDE4A-207ENST00000590407 HECW2Q9P2P5 1572 aa15.97■□□□□ 0.15
PDE4A-207ENST00000590407 NPATQ14207 1427 aa15.97■□□□□ 0.15
PDE4A-207ENST00000590407 MORC1Q86VD1 984 aa15.96■□□□□ 0.15
PDE4A-207ENST00000590407 FRMPD1Q5SYB0 1578 aa15.96■□□□□ 0.14
PDE4A-207ENST00000590407 IGHDP01880 384 aa15.95■□□□□ 0.14
PDE4A-207ENST00000590407 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
PDE4A-207ENST00000590407 POGZQ7Z3K3 1410 aa15.95■□□□□ 0.14
PDE4A-207ENST00000590407 ADGRB2O60241 1585 aa15.94■□□□□ 0.14
PDE4A-207ENST00000590407 RGS3P49796 1198 aa15.94■□□□□ 0.14
PDE4A-207ENST00000590407 RARSP54136 660 aaKnown RBP15.94■□□□□ 0.14
PDE4A-207ENST00000590407 GSE1Q14687 1217 aa15.94■□□□□ 0.14
PDE4A-207ENST00000590407 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
PDE4A-207ENST00000590407 USP19O94966 1318 aa15.93■□□□□ 0.14
PDE4A-207ENST00000590407 ABCC3O15438 1527 aa15.93■□□□□ 0.14
PDE4A-207ENST00000590407 ANKRD36BQ8N2N9 1353 aa15.93■□□□□ 0.14
PDE4A-207ENST00000590407 CT47B1P0C2W7 299 aaPredicted RBP15.92■□□□□ 0.14
PDE4A-207ENST00000590407 CFAP53Q96M91 514 aa15.92■□□□□ 0.14
PDE4A-207ENST00000590407 TCP11L2Q8N4U5 519 aa15.92■□□□□ 0.14
PDE4A-207ENST00000590407 GLI2P10070 1586 aa15.92■□□□□ 0.14
PDE4A-207ENST00000590407 ZFYVE9O95405 1425 aa15.91■□□□□ 0.14
PDE4A-207ENST00000590407 ARHGEF28Q8N1W1 1705 aaKnown RBP15.91■□□□□ 0.14
PDE4A-207ENST00000590407 NLRP1Q9C000 1473 aa15.9■□□□□ 0.14
PDE4A-207ENST00000590407 CAMSAP1Q5T5Y3 1602 aa15.9■□□□□ 0.14
PDE4A-207ENST00000590407 TULP4Q9NRJ4 1543 aa15.9■□□□□ 0.14
PDE4A-207ENST00000590407 CANXP27824 592 aaKnown RBP15.9■□□□□ 0.14
PDE4A-207ENST00000590407 SLC12A5Q9H2X9 1139 aa15.9■□□□□ 0.14
PDE4A-207ENST00000590407 EVC2Q86UK5 1308 aa15.89■□□□□ 0.13
PDE4A-207ENST00000590407 PANK1Q8TE04 598 aa15.89■□□□□ 0.13
PDE4A-207ENST00000590407 MYH16Q9H6N6 1097 aa15.89■□□□□ 0.13
PDE4A-207ENST00000590407 TRAK1Q9UPV9 953 aa15.89■□□□□ 0.13
PDE4A-207ENST00000590407 COG6Q9Y2V7 657 aa15.89■□□□□ 0.13
PDE4A-207ENST00000590407 ARHGAP31Q2M1Z3 1444 aa15.89■□□□□ 0.13
PDE4A-207ENST00000590407 NEXMIFQ5QGS0 1516 aa15.88■□□□□ 0.13
PDE4A-207ENST00000590407 SLC4A3P48751 1232 aa15.88■□□□□ 0.13
PDE4A-207ENST00000590407 MTHFSP49914 203 aa15.87■□□□□ 0.13
PDE4A-207ENST00000590407 BECN1Q14457 450 aa15.87■□□□□ 0.13
PDE4A-207ENST00000590407 MED14O60244 1454 aa15.86■□□□□ 0.13
PDE4A-207ENST00000590407 VGFO15240 615 aaPredicted RBP15.85■□□□□ 0.13
PDE4A-207ENST00000590407 ABCC11Q96J66 1382 aa15.85■□□□□ 0.13
PDE4A-207ENST00000590407 CD109Q6YHK3 1445 aa15.84■□□□□ 0.13
PDE4A-207ENST00000590407 RWDD1Q9H446 243 aaPredicted RBP15.84■□□□□ 0.13
PDE4A-207ENST00000590407 NEO1Q92859 1461 aa15.83■□□□□ 0.13
PDE4A-207ENST00000590407 SIGLEC1Q9BZZ2 1709 aa15.83■□□□□ 0.13
PDE4A-207ENST00000590407 PCDHB15Q9Y5E8 787 aa15.83■□□□□ 0.12
PDE4A-207ENST00000590407 IL16Q14005 1332 aa15.83■□□□□ 0.12
PDE4A-207ENST00000590407 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
PDE4A-207ENST00000590407 ANKRD26Q9UPS8 1709 aa15.83■□□□□ 0.12
PDE4A-207ENST00000590407 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
PDE4A-207ENST00000590407 RLBP1P12271 317 aa15.82■□□□□ 0.12
PDE4A-207ENST00000590407 MVPQ14764 893 aaKnown RBP15.82■□□□□ 0.12
PDE4A-207ENST00000590407 IL27Q8NEV9 243 aa15.82■□□□□ 0.12
PDE4A-207ENST00000590407 FRAT1Q92837 279 aaPredicted RBP15.82■□□□□ 0.12
PDE4A-207ENST00000590407 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
PDE4A-207ENST00000590407 CLTCQ00610 1675 aaKnown RBP15.81■□□□□ 0.12
PDE4A-207ENST00000590407 TMEM132EQ6IEE7 984 aa15.81■□□□□ 0.12
PDE4A-207ENST00000590407 UPF2Q9HAU5 1272 aaKnown RBP15.81■□□□□ 0.12
PDE4A-207ENST00000590407 RRP7AQ9Y3A4 280 aaKnown RBP15.81■□□□□ 0.12
PDE4A-207ENST00000590407 FRAT2O75474 233 aaPredicted RBP15.8■□□□□ 0.12
PDE4A-207ENST00000590407 ZKSCAN2Q63HK3 967 aa15.8■□□□□ 0.12
PDE4A-207ENST00000590407 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
PDE4A-207ENST00000590407 SEC24BO95487 1268 aa15.8■□□□□ 0.12
PDE4A-207ENST00000590407 ATAD2Q6PL18 1390 aa15.79■□□□□ 0.12
PDE4A-207ENST00000590407 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
PDE4A-207ENST00000590407 HDAC1Q13547 482 aaPredicted RBP15.78■□□□□ 0.12
PDE4A-207ENST00000590407 NEUROD2Q15784 382 aa15.78■□□□□ 0.12
PDE4A-207ENST00000590407 PLEKHF1Q96S99 279 aa15.78■□□□□ 0.12
PDE4A-207ENST00000590407 DIP2CQ9Y2E4 1556 aa15.78■□□□□ 0.12
PDE4A-207ENST00000590407 U2AF1L5P0DN76 240 aaPredicted RBP15.77■□□□□ 0.12
PDE4A-207ENST00000590407 U2AF1Q01081 240 aaKnown RBP eCLIP15.77■□□□□ 0.12
PDE4A-207ENST00000590407 DZIP1LQ8IYY4 767 aaKnown RBP15.77■□□□□ 0.12
PDE4A-207ENST00000590407 ANTXR1Q9H6X2 564 aa15.77■□□□□ 0.12
PDE4A-207ENST00000590407 CFAP65Q6ZU64 1925 aaKnown RBP15.77■□□□□ 0.12
PDE4A-207ENST00000590407 NPM1P06748 294 aaKnown RBP eCLIP15.77■□□□□ 0.11
PDE4A-207ENST00000590407 GGT6Q6P531 493 aa15.77■□□□□ 0.11
PDE4A-207ENST00000590407 SLC52A1Q9NWF4 448 aa15.77■□□□□ 0.11
PDE4A-207ENST00000590407 A0A1W2PP64 1363 aa15.77■□□□□ 0.11
PDE4A-207ENST00000590407 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
PDE4A-207ENST00000590407 PTPRMP28827 1452 aa15.76■□□□□ 0.11
PDE4A-207ENST00000590407 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
PDE4A-207ENST00000590407 TMPOP42166 694 aaKnown RBP15.75■□□□□ 0.11
PDE4A-207ENST00000590407 TNNQ9UQP3 1299 aa15.75■□□□□ 0.11
PDE4A-207ENST00000590407 PNNQ9H307 717 aaKnown RBP15.74■□□□□ 0.11
PDE4A-207ENST00000590407 DDX19BQ9UMR2 479 aa15.74■□□□□ 0.11
PDE4A-207ENST00000590407 FTSJ3Q8IY81 847 aaKnown RBP15.73■□□□□ 0.11
PDE4A-207ENST00000590407 TRIM35Q9UPQ4 493 aa15.73■□□□□ 0.11
PDE4A-207ENST00000590407 CD163L1Q9NR16 1453 aa15.73■□□□□ 0.11
PDE4A-207ENST00000590407 TMEM131LA2VDJ0 1609 aa15.72■□□□□ 0.11
PDE4A-207ENST00000590407 TERF2IPQ9NYB0 399 aa15.72■□□□□ 0.11
PDE4A-207ENST00000590407 BRPF1P55201 1214 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms