RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 NGLY1Q96IV0 654 aa24.32■■□□□ 1.48
RAB3D-202ENST00000589655 COL22A1Q8NFW1 1626 aaPredicted RBP24.32■■□□□ 1.48
RAB3D-202ENST00000589655 IFT172Q9UG01 1749 aa24.31■■□□□ 1.48
RAB3D-202ENST00000589655 CCDC144AA2RUR9 1427 aa24.29■■□□□ 1.48
RAB3D-202ENST00000589655 TECPR2O15040 1411 aa24.29■■□□□ 1.48
RAB3D-202ENST00000589655 PXDNQ92626 1479 aa24.28■■□□□ 1.48
RAB3D-202ENST00000589655 RGL3Q3MIN7 710 aa24.28■■□□□ 1.48
RAB3D-202ENST00000589655 MYOM2P54296 1465 aa24.27■■□□□ 1.48
RAB3D-202ENST00000589655 WAPLQ7Z5K2 1190 aa24.27■■□□□ 1.48
RAB3D-202ENST00000589655 ESCO1Q5FWF5 840 aa24.26■■□□□ 1.47
RAB3D-202ENST00000589655 FNBP4Q8N3X1 1017 aaPredicted RBP24.26■■□□□ 1.47
RAB3D-202ENST00000589655 MPHOSPH9Q99550 1183 aa24.26■■□□□ 1.47
RAB3D-202ENST00000589655 STK26Q9P289 416 aa24.26■■□□□ 1.47
RAB3D-202ENST00000589655 LRPPRCP42704 1394 aaKnown RBP24.26■■□□□ 1.47
RAB3D-202ENST00000589655 PLEKHH1Q9ULM0 1364 aa24.26■■□□□ 1.47
RAB3D-202ENST00000589655 USP21Q9UK80 565 aa24.25■■□□□ 1.47
RAB3D-202ENST00000589655 TMEM132EQ6IEE7 984 aa24.24■■□□□ 1.47
RAB3D-202ENST00000589655 NPHP3Q7Z494 1330 aa24.24■■□□□ 1.47
RAB3D-202ENST00000589655 ANKRD30BQ9BXX2 1392 aa24.24■■□□□ 1.47
RAB3D-202ENST00000589655 PIK3C2GO75747 1445 aa24.24■■□□□ 1.47
RAB3D-202ENST00000589655 FOXO3O43524 673 aa24.23■■□□□ 1.47
RAB3D-202ENST00000589655 XPCQ01831 940 aaPredicted RBP24.23■■□□□ 1.47
RAB3D-202ENST00000589655 ABCC11Q96J66 1382 aa24.23■■□□□ 1.47
RAB3D-202ENST00000589655 KNDC1Q76NI1 1749 aa24.23■■□□□ 1.47
RAB3D-202ENST00000589655 ATRNO75882 1429 aa24.22■■□□□ 1.47
RAB3D-202ENST00000589655 NUTM2FA1L443 756 aa24.21■■□□□ 1.47
RAB3D-202ENST00000589655 TRPC5Q9UL62 973 aaPredicted RBP24.21■■□□□ 1.47
RAB3D-202ENST00000589655 BCL9LQ86UU0 1499 aa24.19■■□□□ 1.46
RAB3D-202ENST00000589655 MARF1Q9Y4F3 1742 aaKnown RBP24.19■■□□□ 1.46
RAB3D-202ENST00000589655 FMN2Q9NZ56 1722 aa24.18■■□□□ 1.46
RAB3D-202ENST00000589655 YTHDC2Q9H6S0 1430 aaKnown RBP24.18■■□□□ 1.46
RAB3D-202ENST00000589655 ATAD2Q6PL18 1390 aa24.15■■□□□ 1.46
RAB3D-202ENST00000589655 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
RAB3D-202ENST00000589655 C14orf93Q9H972 538 aaKnown RBP24.12■■□□□ 1.45
RAB3D-202ENST00000589655 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
RAB3D-202ENST00000589655 SIRT1Q96EB6 747 aa24.11■■□□□ 1.45
RAB3D-202ENST00000589655 KIF1AQ12756 1690 aa24.11■■□□□ 1.45
RAB3D-202ENST00000589655 RGPD8O14715 1765 aaPredicted RBP24.1■■□□□ 1.45
RAB3D-202ENST00000589655 CFAP70Q5T0N1 1121 aa24.09■■□□□ 1.45
RAB3D-202ENST00000589655 SLIT2O94813 1529 aa24.08■■□□□ 1.45
RAB3D-202ENST00000589655 EP400Q96L91 3159 aa24.08■■□□□ 1.45
RAB3D-202ENST00000589655 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.07■■□□□ 1.44
RAB3D-202ENST00000589655 GJD4Q96KN9 370 aaPredicted RBP24.07■■□□□ 1.44
RAB3D-202ENST00000589655 KRT28Q7Z3Y7 464 aa24.06■■□□□ 1.44
RAB3D-202ENST00000589655 GLI3P10071 1580 aa24.05■■□□□ 1.44
RAB3D-202ENST00000589655 USP32Q8NFA0 1604 aa24.05■■□□□ 1.44
RAB3D-202ENST00000589655 DHX57Q6P158 1386 aaKnown RBP24.03■■□□□ 1.44
RAB3D-202ENST00000589655 PHF8Q9UPP1 1060 aa24.03■■□□□ 1.44
RAB3D-202ENST00000589655 TNS3Q68CZ2 1445 aa24.02■■□□□ 1.44
RAB3D-202ENST00000589655 RALGAPBQ86X10 1494 aa24.02■■□□□ 1.44
RAB3D-202ENST00000589655 UNC5CLQ8IV45 518 aa24.02■■□□□ 1.44
RAB3D-202ENST00000589655 PRAM1Q96QH2 718 aa24.02■■□□□ 1.44
RAB3D-202ENST00000589655 SAFB2Q14151 953 aaKnown RBP eCLIP24.01■■□□□ 1.43
RAB3D-202ENST00000589655 SRCAPQ6ZRS2 3230 aa24■■□□□ 1.43
RAB3D-202ENST00000589655 CABLES1Q8TDN4 633 aa24■■□□□ 1.43
RAB3D-202ENST00000589655 DLC1Q96QB1 1528 aa24■■□□□ 1.43
RAB3D-202ENST00000589655 ADGRB1O14514 1584 aa23.99■■□□□ 1.43
RAB3D-202ENST00000589655 ACIN1Q9UKV3 1341 aaKnown RBP23.98■■□□□ 1.43
RAB3D-202ENST00000589655 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
RAB3D-202ENST00000589655 ABCA3Q99758 1704 aa23.98■■□□□ 1.43
RAB3D-202ENST00000589655 SBNO1A3KN83 1393 aa23.97■■□□□ 1.43
RAB3D-202ENST00000589655 BRWD3Q6RI45 1802 aa23.96■■□□□ 1.43
RAB3D-202ENST00000589655 ADGRB2O60241 1585 aa23.95■■□□□ 1.43
RAB3D-202ENST00000589655 PSME1Q06323 249 aa23.95■■□□□ 1.42
RAB3D-202ENST00000589655 CCDC125Q86Z20 511 aa23.95■■□□□ 1.42
RAB3D-202ENST00000589655 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.42
RAB3D-202ENST00000589655 ANKARQ7Z5J8 1434 aa23.93■■□□□ 1.42
RAB3D-202ENST00000589655 PLEKHG5O94827 1062 aa23.93■■□□□ 1.42
RAB3D-202ENST00000589655 PMFBP1Q8TBY8 1022 aa23.93■■□□□ 1.42
RAB3D-202ENST00000589655 POGKQ9P215 609 aa23.92■■□□□ 1.42
RAB3D-202ENST00000589655 NWD2Q9ULI1 1742 aa23.92■■□□□ 1.42
RAB3D-202ENST00000589655 TRPM3Q9HCF6 1732 aaPredicted RBP23.91■■□□□ 1.42
RAB3D-202ENST00000589655 VPS72Q15906 364 aa23.91■■□□□ 1.42
RAB3D-202ENST00000589655 ARHGEF10O15013 1369 aa23.91■■□□□ 1.42
RAB3D-202ENST00000589655 HAP1P54257 671 aaPredicted RBP23.9■■□□□ 1.42
RAB3D-202ENST00000589655 HIRIP3Q9BW71 556 aaPredicted RBP23.9■■□□□ 1.42
RAB3D-202ENST00000589655 ZRANB1Q9UGI0 708 aa23.9■■□□□ 1.42
RAB3D-202ENST00000589655 PRR36Q9H6K5 1346 aa23.89■■□□□ 1.42
RAB3D-202ENST00000589655 LMOD2Q6P5Q4 547 aa23.89■■□□□ 1.41
RAB3D-202ENST00000589655 SEPT12Q8IYM1 358 aa23.89■■□□□ 1.41
RAB3D-202ENST00000589655 TRAK1Q9UPV9 953 aa23.89■■□□□ 1.41
RAB3D-202ENST00000589655 BLMP54132 1417 aaPredicted RBP23.88■■□□□ 1.41
RAB3D-202ENST00000589655 FAM83GA6ND36 823 aa23.88■■□□□ 1.41
RAB3D-202ENST00000589655 ONECUT3O60422 494 aaPredicted RBP23.88■■□□□ 1.41
RAB3D-202ENST00000589655 MINK1Q8N4C8 1332 aaPredicted RBP23.86■■□□□ 1.41
RAB3D-202ENST00000589655 ALS2Q96Q42 1657 aa23.86■■□□□ 1.41
RAB3D-202ENST00000589655 NRAPQ86VF7 1730 aa23.85■■□□□ 1.41
RAB3D-202ENST00000589655 KDM2AQ9Y2K7 1162 aa23.85■■□□□ 1.41
RAB3D-202ENST00000589655 TULP4Q9NRJ4 1543 aa23.84■■□□□ 1.41
RAB3D-202ENST00000589655 DEFB132Q7Z7B7 95 aa23.84■■□□□ 1.41
RAB3D-202ENST00000589655 DCAF11Q8TEB1 546 aa23.84■■□□□ 1.41
RAB3D-202ENST00000589655 WASLO00401 505 aaPredicted RBP23.81■■□□□ 1.4
RAB3D-202ENST00000589655 CCDC9Q9Y3X0 531 aaKnown RBP23.81■■□□□ 1.4
RAB3D-202ENST00000589655 CRYBG1Q9Y4K1 1723 aa23.81■■□□□ 1.4
RAB3D-202ENST00000589655 GPRASP1Q5JY77 1395 aa23.79■■□□□ 1.4
RAB3D-202ENST00000589655 ARHGEF28Q8N1W1 1705 aaKnown RBP23.79■■□□□ 1.4
RAB3D-202ENST00000589655 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
RAB3D-202ENST00000589655 KRT27Q7Z3Y8 459 aa23.78■■□□□ 1.4
RAB3D-202ENST00000589655 BTG4Q9NY30 223 aa23.78■■□□□ 1.4
RAB3D-202ENST00000589655 COL14A1Q05707 1796 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms