RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 CARD11Q9BXL7 1154 aa22.06■■□□□ 1.12
GHDC-209ENST00000588762 GPRASP1Q5JY77 1395 aa22.06■■□□□ 1.12
GHDC-209ENST00000588762 PLEKHH1Q9ULM0 1364 aa22.06■■□□□ 1.12
GHDC-209ENST00000588762 DCCP43146 1447 aa22.05■■□□□ 1.12
GHDC-209ENST00000588762 SAFB2Q14151 953 aaKnown RBP eCLIP22.04■■□□□ 1.12
GHDC-209ENST00000588762 CADPS2Q86UW7 1296 aa22.03■■□□□ 1.12
GHDC-209ENST00000588762 FBXO41Q8TF61 875 aa22.02■■□□□ 1.12
GHDC-209ENST00000588762 EIF3AQ14152 1382 aaKnown RBP22.01■■□□□ 1.11
GHDC-209ENST00000588762 CDC42BPGQ6DT37 1551 aa22■■□□□ 1.11
GHDC-209ENST00000588762 QRICH2Q9H0J4 1663 aa22■■□□□ 1.11
GHDC-209ENST00000588762 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
GHDC-209ENST00000588762 CENPJQ9HC77 1338 aaPredicted RBP21.99■■□□□ 1.11
GHDC-209ENST00000588762 PIP4K2BP78356 416 aa21.98■■□□□ 1.11
GHDC-209ENST00000588762 SLAIN2Q9P270 581 aa21.98■■□□□ 1.11
GHDC-209ENST00000588762 MINK1Q8N4C8 1332 aaPredicted RBP21.98■■□□□ 1.11
GHDC-209ENST00000588762 ADGRB2O60241 1585 aa21.97■■□□□ 1.11
GHDC-209ENST00000588762 FMN2Q9NZ56 1722 aa21.96■■□□□ 1.11
GHDC-209ENST00000588762 HIRIP3Q9BW71 556 aaPredicted RBP21.94■■□□□ 1.1
GHDC-209ENST00000588762 MST1RQ04912 1400 aa21.93■■□□□ 1.1
GHDC-209ENST00000588762 ROBO1Q9Y6N7 1651 aa21.92■■□□□ 1.1
GHDC-209ENST00000588762 RGPD8O14715 1765 aaPredicted RBP21.9■■□□□ 1.1
GHDC-209ENST00000588762 USP47Q96K76 1375 aa21.89■■□□□ 1.1
GHDC-209ENST00000588762 WASLO00401 505 aaPredicted RBP21.89■■□□□ 1.09
GHDC-209ENST00000588762 C1orf167Q5SNV9 1468 aa21.89■■□□□ 1.09
GHDC-209ENST00000588762 NUTM2FA1L443 756 aa21.88■■□□□ 1.09
GHDC-209ENST00000588762 TULP4Q9NRJ4 1543 aa21.85■■□□□ 1.09
GHDC-209ENST00000588762 ST20-MTHFSA0A0A6YYL1 179 aa21.85■■□□□ 1.09
GHDC-209ENST00000588762 CDK19Q9BWU1 502 aa21.85■■□□□ 1.09
GHDC-209ENST00000588762 ANKARQ7Z5J8 1434 aa21.85■■□□□ 1.09
GHDC-209ENST00000588762 SBNO2Q9Y2G9 1366 aa21.85■■□□□ 1.09
GHDC-209ENST00000588762 EVC2Q86UK5 1308 aa21.84■■□□□ 1.09
GHDC-209ENST00000588762 ITSN1Q15811 1721 aa21.84■■□□□ 1.09
GHDC-209ENST00000588762 BRINP3Q76B58 766 aa21.84■■□□□ 1.09
GHDC-209ENST00000588762 USP32Q8NFA0 1604 aa21.84■■□□□ 1.09
GHDC-209ENST00000588762 SLC24A1O60721 1099 aa21.83■■□□□ 1.09
GHDC-209ENST00000588762 ESCO1Q5FWF5 840 aa21.83■■□□□ 1.09
GHDC-209ENST00000588762 SRPK2P78362 688 aaKnown RBP21.82■■□□□ 1.08
GHDC-209ENST00000588762 ILDR1Q86SU0 546 aaPredicted RBP21.82■■□□□ 1.08
GHDC-209ENST00000588762 ORAI2Q96SN7 254 aa21.82■■□□□ 1.08
GHDC-209ENST00000588762 KIF1AQ12756 1690 aa21.82■■□□□ 1.08
GHDC-209ENST00000588762 PHLPP1O60346 1717 aa21.81■■□□□ 1.08
GHDC-209ENST00000588762 EIF4G2P78344 907 aaKnown RBP eCLIP21.81■■□□□ 1.08
GHDC-209ENST00000588762 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
GHDC-209ENST00000588762 NUDT16Q96DE0 195 aaKnown RBP21.79■■□□□ 1.08
GHDC-209ENST00000588762 NHSL1Q5SYE7 1610 aa21.79■■□□□ 1.08
GHDC-209ENST00000588762 TESK2Q96S53 571 aa21.78■■□□□ 1.08
GHDC-209ENST00000588762 CABP2Q9NPB3 220 aa21.78■■□□□ 1.08
GHDC-209ENST00000588762 PRR36Q9H6K5 1346 aa21.78■■□□□ 1.08
GHDC-209ENST00000588762 ATP7BP35670 1465 aa21.77■■□□□ 1.08
GHDC-209ENST00000588762 AHDC1Q5TGY3 1603 aaPredicted RBP21.77■■□□□ 1.08
GHDC-209ENST00000588762 PHF8Q9UPP1 1060 aa21.77■■□□□ 1.08
GHDC-209ENST00000588762 TOPAZ1Q8N9V7 1692 aa21.76■■□□□ 1.07
GHDC-209ENST00000588762 HSPA1LP34931 641 aa21.76■■□□□ 1.07
GHDC-209ENST00000588762 HSPA5P11021 654 aaKnown RBP21.75■■□□□ 1.07
GHDC-209ENST00000588762 CCDC61Q9Y6R9 512 aa21.75■■□□□ 1.07
GHDC-209ENST00000588762 TMF1P82094 1093 aa21.74■■□□□ 1.07
GHDC-209ENST00000588762 NPHP3Q7Z494 1330 aa21.73■■□□□ 1.07
GHDC-209ENST00000588762 FOXO3O43524 673 aa21.72■■□□□ 1.07
GHDC-209ENST00000588762 PMFBP1Q8TBY8 1022 aa21.72■■□□□ 1.07
GHDC-209ENST00000588762 ATAD2Q6PL18 1390 aa21.72■■□□□ 1.07
GHDC-209ENST00000588762 COL16A1Q07092 1604 aaPredicted RBP21.71■■□□□ 1.07
GHDC-209ENST00000588762 DDX17Q92841 729 aaKnown RBP21.71■■□□□ 1.07
GHDC-209ENST00000588762 PPIP5K1Q6PFW1 1433 aa21.71■■□□□ 1.07
GHDC-209ENST00000588762 CDCA8Q53HL2 280 aa21.7■■□□□ 1.06
GHDC-209ENST00000588762 NGDNQ8NEJ9 315 aaKnown RBP21.7■■□□□ 1.06
GHDC-209ENST00000588762 PUS7Q96PZ0 661 aaKnown RBP21.7■■□□□ 1.06
GHDC-209ENST00000588762 PSME1Q06323 249 aa21.68■■□□□ 1.06
GHDC-209ENST00000588762 DISP3Q9P2K9 1392 aa21.68■■□□□ 1.06
GHDC-209ENST00000588762 PLEKHG3A1L390 1219 aa21.67■■□□□ 1.06
GHDC-209ENST00000588762 SOS2Q07890 1332 aaPredicted RBP21.66■■□□□ 1.06
GHDC-209ENST00000588762 XPCQ01831 940 aaPredicted RBP21.66■■□□□ 1.06
GHDC-209ENST00000588762 KRT28Q7Z3Y7 464 aa21.66■■□□□ 1.06
GHDC-209ENST00000588762 CABP1Q9NZU7 370 aa21.66■■□□□ 1.06
GHDC-209ENST00000588762 PXDNQ92626 1479 aa21.65■■□□□ 1.06
GHDC-209ENST00000588762 ACEP12821 1306 aa21.65■■□□□ 1.06
GHDC-209ENST00000588762 LRRC59Q96AG4 307 aaKnown RBP21.65■■□□□ 1.06
GHDC-209ENST00000588762 POLR3AO14802 1390 aaPredicted RBP21.64■■□□□ 1.06
GHDC-209ENST00000588762 TMC1Q8TDI8 760 aa21.64■■□□□ 1.05
GHDC-209ENST00000588762 AKAP12Q02952 1782 aa21.62■■□□□ 1.05
GHDC-209ENST00000588762 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
GHDC-209ENST00000588762 JCADQ9P266 1359 aa21.61■■□□□ 1.05
GHDC-209ENST00000588762 NINLQ9Y2I6 1382 aa21.61■■□□□ 1.05
GHDC-209ENST00000588762 TRPM3Q9HCF6 1732 aaPredicted RBP21.6■■□□□ 1.05
GHDC-209ENST00000588762 POLR3GLQ9BT43 218 aa21.59■■□□□ 1.05
GHDC-209ENST00000588762 ZNF692Q9BU19 519 aaPredicted RBP21.59■■□□□ 1.05
GHDC-209ENST00000588762 SBNO1A3KN83 1393 aa21.59■■□□□ 1.05
GHDC-209ENST00000588762 SLC12A5Q9H2X9 1139 aa21.58■■□□□ 1.05
GHDC-209ENST00000588762 TERF2IPQ9NYB0 399 aa21.58■■□□□ 1.05
GHDC-209ENST00000588762 SPATA31A3Q5VYP0 1347 aa21.57■■□□□ 1.04
GHDC-209ENST00000588762 PAK3O75914 559 aaPredicted RBP21.57■■□□□ 1.04
GHDC-209ENST00000588762 HDGFL2Q7Z4V5 671 aaPredicted RBP21.57■■□□□ 1.04
GHDC-209ENST00000588762 TNS3Q68CZ2 1445 aa21.56■■□□□ 1.04
GHDC-209ENST00000588762 MON2Q7Z3U7 1717 aa21.56■■□□□ 1.04
GHDC-209ENST00000588762 LMOD2Q6P5Q4 547 aa21.56■■□□□ 1.04
GHDC-209ENST00000588762 BRD4O60885 1362 aaPredicted RBP21.56■■□□□ 1.04
GHDC-209ENST00000588762 MYOM1P52179 1685 aa21.56■■□□□ 1.04
GHDC-209ENST00000588762 USP6P35125 1406 aa21.55■■□□□ 1.04
GHDC-209ENST00000588762 CPSF1Q10570 1443 aaKnown RBP21.55■■□□□ 1.04
GHDC-209ENST00000588762 KTN1Q86UP2 1357 aaKnown RBP21.55■■□□□ 1.04
GHDC-209ENST00000588762 PNPLA6Q8IY17 1366 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms