RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 SLAIN2Q9P270 581 aa11.62□□□□□ -0.55
APOC1-202ENST00000588750 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.62□□□□□ -0.55
APOC1-202ENST00000588750 PIP4K2BP78356 416 aa11.61□□□□□ -0.55
APOC1-202ENST00000588750 CDC42BPGQ6DT37 1551 aa11.6□□□□□ -0.55
APOC1-202ENST00000588750 RALGAPBQ86X10 1494 aa11.6□□□□□ -0.55
APOC1-202ENST00000588750 WAPLQ7Z5K2 1190 aa11.6□□□□□ -0.55
APOC1-202ENST00000588750 CARD11Q9BXL7 1154 aa11.6□□□□□ -0.55
APOC1-202ENST00000588750 GPRASP1Q5JY77 1395 aa11.59□□□□□ -0.55
APOC1-202ENST00000588750 NBPF1Q3BBV0 1214 aa11.59□□□□□ -0.55
APOC1-202ENST00000588750 NALCNQ8IZF0 1738 aa11.59□□□□□ -0.55
APOC1-202ENST00000588750 ARHGEF28Q8N1W1 1705 aaKnown RBP11.58□□□□□ -0.56
APOC1-202ENST00000588750 CENPJQ9HC77 1338 aaPredicted RBP11.58□□□□□ -0.56
APOC1-202ENST00000588750 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
APOC1-202ENST00000588750 ADGRB2O60241 1585 aa11.57□□□□□ -0.56
APOC1-202ENST00000588750 MST1RQ04912 1400 aa11.56□□□□□ -0.56
APOC1-202ENST00000588750 SAFB2Q14151 953 aaKnown RBP eCLIP11.56□□□□□ -0.56
APOC1-202ENST00000588750 PLEKHH1Q9ULM0 1364 aa11.55□□□□□ -0.56
APOC1-202ENST00000588750 ILDR1Q86SU0 546 aaPredicted RBP11.55□□□□□ -0.56
APOC1-202ENST00000588750 ROBO1Q9Y6N7 1651 aa11.55□□□□□ -0.56
APOC1-202ENST00000588750 ANKARQ7Z5J8 1434 aa11.54□□□□□ -0.56
APOC1-202ENST00000588750 WASLO00401 505 aaPredicted RBP11.54□□□□□ -0.56
APOC1-202ENST00000588750 C1orf167Q5SNV9 1468 aa11.54□□□□□ -0.56
APOC1-202ENST00000588750 EVC2Q86UK5 1308 aa11.54□□□□□ -0.56
APOC1-202ENST00000588750 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
APOC1-202ENST00000588750 FMN2Q9NZ56 1722 aa11.53□□□□□ -0.56
APOC1-202ENST00000588750 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
APOC1-202ENST00000588750 SBNO2Q9Y2G9 1366 aa11.53□□□□□ -0.56
APOC1-202ENST00000588750 QRICH2Q9H0J4 1663 aa11.52□□□□□ -0.56
APOC1-202ENST00000588750 BRINP3Q76B58 766 aa11.52□□□□□ -0.57
APOC1-202ENST00000588750 NPHP3Q7Z494 1330 aa11.52□□□□□ -0.57
APOC1-202ENST00000588750 TULP4Q9NRJ4 1543 aa11.51□□□□□ -0.57
APOC1-202ENST00000588750 SRPK2P78362 688 aaKnown RBP11.51□□□□□ -0.57
APOC1-202ENST00000588750 HIRIP3Q9BW71 556 aaPredicted RBP11.51□□□□□ -0.57
APOC1-202ENST00000588750 KIF1AQ12756 1690 aa11.51□□□□□ -0.57
APOC1-202ENST00000588750 ITSN1Q15811 1721 aa11.5□□□□□ -0.57
APOC1-202ENST00000588750 CDCA8Q53HL2 280 aa11.5□□□□□ -0.57
APOC1-202ENST00000588750 CDK19Q9BWU1 502 aa11.5□□□□□ -0.57
APOC1-202ENST00000588750 AHDC1Q5TGY3 1603 aaPredicted RBP11.49□□□□□ -0.57
APOC1-202ENST00000588750 PHLPP1O60346 1717 aa11.49□□□□□ -0.57
APOC1-202ENST00000588750 HSPA1LP34931 641 aa11.49□□□□□ -0.57
APOC1-202ENST00000588750 PSME1Q06323 249 aa11.49□□□□□ -0.57
APOC1-202ENST00000588750 LRRC59Q96AG4 307 aaKnown RBP11.49□□□□□ -0.57
APOC1-202ENST00000588750 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
APOC1-202ENST00000588750 CCDC61Q9Y6R9 512 aa11.49□□□□□ -0.57
APOC1-202ENST00000588750 USP47Q96K76 1375 aa11.49□□□□□ -0.57
APOC1-202ENST00000588750 NUTM2FA1L443 756 aa11.48□□□□□ -0.57
APOC1-202ENST00000588750 EIF4G2P78344 907 aaKnown RBP eCLIP11.48□□□□□ -0.57
APOC1-202ENST00000588750 NUDT16Q96DE0 195 aaKnown RBP11.48□□□□□ -0.57
APOC1-202ENST00000588750 PUS7Q96PZ0 661 aaKnown RBP11.48□□□□□ -0.57
APOC1-202ENST00000588750 ATAD2Q6PL18 1390 aa11.48□□□□□ -0.57
APOC1-202ENST00000588750 NHSL1Q5SYE7 1610 aa11.47□□□□□ -0.57
APOC1-202ENST00000588750 ZEB1P37275 1124 aaPredicted RBP11.47□□□□□ -0.57
APOC1-202ENST00000588750 TMF1P82094 1093 aa11.47□□□□□ -0.57
APOC1-202ENST00000588750 ORAI2Q96SN7 254 aa11.47□□□□□ -0.57
APOC1-202ENST00000588750 JCADQ9P266 1359 aa11.46□□□□□ -0.57
APOC1-202ENST00000588750 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.57
APOC1-202ENST00000588750 NGDNQ8NEJ9 315 aaKnown RBP11.46□□□□□ -0.57
APOC1-202ENST00000588750 FOXO3O43524 673 aa11.45□□□□□ -0.58
APOC1-202ENST00000588750 ATP7BP35670 1465 aa11.44□□□□□ -0.58
APOC1-202ENST00000588750 NINLQ9Y2I6 1382 aa11.44□□□□□ -0.58
APOC1-202ENST00000588750 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
APOC1-202ENST00000588750 SPATA31A6Q5VVP1 1343 aa11.44□□□□□ -0.58
APOC1-202ENST00000588750 RGPD8O14715 1765 aaPredicted RBP11.44□□□□□ -0.58
APOC1-202ENST00000588750 BRD4O60885 1362 aaPredicted RBP11.43□□□□□ -0.58
APOC1-202ENST00000588750 COL16A1Q07092 1604 aaPredicted RBP11.43□□□□□ -0.58
APOC1-202ENST00000588750 USP32Q8NFA0 1604 aa11.43□□□□□ -0.58
APOC1-202ENST00000588750 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
APOC1-202ENST00000588750 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
APOC1-202ENST00000588750 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
APOC1-202ENST00000588750 PPIP5K1Q6PFW1 1433 aa11.43□□□□□ -0.58
APOC1-202ENST00000588750 KRT28Q7Z3Y7 464 aa11.42□□□□□ -0.58
APOC1-202ENST00000588750 PMFBP1Q8TBY8 1022 aa11.42□□□□□ -0.58
APOC1-202ENST00000588750 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
APOC1-202ENST00000588750 ARHGEF10O15013 1369 aa11.41□□□□□ -0.58
APOC1-202ENST00000588750 PRR36Q9H6K5 1346 aa11.41□□□□□ -0.58
APOC1-202ENST00000588750 SHPRHQ149N8 1683 aa11.41□□□□□ -0.58
APOC1-202ENST00000588750 TOPAZ1Q8N9V7 1692 aa11.41□□□□□ -0.58
APOC1-202ENST00000588750 TESK2Q96S53 571 aa11.41□□□□□ -0.58
APOC1-202ENST00000588750 POLR3AO14802 1390 aaPredicted RBP11.41□□□□□ -0.58
APOC1-202ENST00000588750 ACEP12821 1306 aa11.4□□□□□ -0.58
APOC1-202ENST00000588750 PXDNQ92626 1479 aa11.4□□□□□ -0.58
APOC1-202ENST00000588750 HDGFL2Q7Z4V5 671 aaPredicted RBP11.4□□□□□ -0.58
APOC1-202ENST00000588750 TERF2IPQ9NYB0 399 aa11.4□□□□□ -0.58
APOC1-202ENST00000588750 TMC1Q8TDI8 760 aa11.39□□□□□ -0.59
APOC1-202ENST00000588750 CABP1Q9NZU7 370 aa11.39□□□□□ -0.59
APOC1-202ENST00000588750 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
APOC1-202ENST00000588750 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
APOC1-202ENST00000588750 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
APOC1-202ENST00000588750 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
APOC1-202ENST00000588750 LMOD2Q6P5Q4 547 aa11.38□□□□□ -0.59
APOC1-202ENST00000588750 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
APOC1-202ENST00000588750 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
APOC1-202ENST00000588750 XPCQ01831 940 aaPredicted RBP11.37□□□□□ -0.59
APOC1-202ENST00000588750 MEX3CQ5U5Q3 659 aaKnown RBP11.37□□□□□ -0.59
APOC1-202ENST00000588750 PNPLA6Q8IY17 1366 aa11.37□□□□□ -0.59
APOC1-202ENST00000588750 COL22A1Q8NFW1 1626 aaPredicted RBP11.36□□□□□ -0.59
APOC1-202ENST00000588750 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
APOC1-202ENST00000588750 KTN1Q86UP2 1357 aaKnown RBP11.35□□□□□ -0.59
APOC1-202ENST00000588750 USP6P35125 1406 aa11.35□□□□□ -0.59
APOC1-202ENST00000588750 DISP3Q9P2K9 1392 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms