RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, human

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-219	ENST00000588411	KNDC1	Q76NI1	1749 aa		31.89	■■■□□ 2.69
CIRBP-219	ENST00000588411	CFAP70	Q5T0N1	1121 aa		31.88	■■■□□ 2.69
CIRBP-219	ENST00000588411	WAPL	Q7Z5K2	1190 aa		31.88	■■■□□ 2.69
CIRBP-219	ENST00000588411	STAC3	Q96MF2	364 aa		31.88	■■■□□ 2.69
CIRBP-219	ENST00000588411	SIRT1	Q96EB6	747 aa		31.87	■■■□□ 2.69
CIRBP-219	ENST00000588411	ORAI2	Q96SN7	254 aa		31.85	■■■□□ 2.69
CIRBP-219	ENST00000588411	DDX17	Q92841	729 aa	Known RBP	31.84	■■■□□ 2.69
CIRBP-219	ENST00000588411	DCAF11	Q8TEB1	546 aa		31.83	■■■□□ 2.69
CIRBP-219	ENST00000588411	LRP6	O75581	1613 aa		31.82	■■■□□ 2.69
CIRBP-219	ENST00000588411	PLEKHH1	Q9ULM0	1364 aa		31.81	■■■□□ 2.68
CIRBP-219	ENST00000588411	KDM2A	Q9Y2K7	1162 aa		31.81	■■■□□ 2.68
CIRBP-219	ENST00000588411	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.8	■■■□□ 2.68
CIRBP-219	ENST00000588411	NUTM2E	B1AL46	878 aa	Predicted RBP	31.8	■■■□□ 2.68
CIRBP-219	ENST00000588411	ESCO1	Q5FWF5	840 aa		31.8	■■■□□ 2.68
CIRBP-219	ENST00000588411	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.8	■■■□□ 2.68
CIRBP-219	ENST00000588411	POTEA	Q6S8J7	498 aa		31.79	■■■□□ 2.68
CIRBP-219	ENST00000588411	SOS2	Q07890	1332 aa	Predicted RBP	31.77	■■■□□ 2.68
CIRBP-219	ENST00000588411	PNPLA6	Q8IY17	1366 aa		31.77	■■■□□ 2.68
CIRBP-219	ENST00000588411	NPHP3	Q7Z494	1330 aa		31.76	■■■□□ 2.68
CIRBP-219	ENST00000588411	ZNF772	Q68DY9	489 aa	Predicted RBP	31.75	■■■□□ 2.67
CIRBP-219	ENST00000588411	PRAM1	Q96QH2	718 aa		31.74	■■■□□ 2.67
CIRBP-219	ENST00000588411	POGK	Q9P215	609 aa		31.74	■■■□□ 2.67
CIRBP-219	ENST00000588411	DLC1	Q96QB1	1528 aa		31.72	■■■□□ 2.67
CIRBP-219	ENST00000588411	NUTM2F	A1L443	756 aa		31.72	■■■□□ 2.67
CIRBP-219	ENST00000588411	ADGRB1	O14514	1584 aa		31.69	■■■□□ 2.66
CIRBP-219	ENST00000588411	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.68	■■■□□ 2.66
CIRBP-219	ENST00000588411	FMN2	Q9NZ56	1722 aa		31.67	■■■□□ 2.66
CIRBP-219	ENST00000588411	FOXO3	O43524	673 aa		31.66	■■■□□ 2.66
CIRBP-219	ENST00000588411	TRAK1	Q9UPV9	953 aa		31.66	■■■□□ 2.66
CIRBP-219	ENST00000588411	PXDN	Q92626	1479 aa		31.62	■■■□□ 2.65
CIRBP-219	ENST00000588411	C8orf37	Q96NL8	207 aa		31.62	■■■□□ 2.65
CIRBP-219	ENST00000588411	AFF2	P51816	1311 aa		31.61	■■■□□ 2.65
CIRBP-219	ENST00000588411	KIF1A	Q12756	1690 aa		31.6	■■■□□ 2.65
CIRBP-219	ENST00000588411	ADAMTS2	O95450	1211 aa		31.59	■■■□□ 2.65
CIRBP-219	ENST00000588411	XPC	Q01831	940 aa	Predicted RBP	31.59	■■■□□ 2.65
CIRBP-219	ENST00000588411	PHF8	Q9UPP1	1060 aa		31.58	■■■□□ 2.65
CIRBP-219	ENST00000588411	EIF3A	Q14152	1382 aa	Known RBP	31.57	■■■□□ 2.64
CIRBP-219	ENST00000588411	ANKAR	Q7Z5J8	1434 aa		31.56	■■■□□ 2.64
CIRBP-219	ENST00000588411	ADGRB2	O60241	1585 aa		31.56	■■■□□ 2.64
CIRBP-219	ENST00000588411	NGLY1	Q96IV0	654 aa		31.55	■■■□□ 2.64
CIRBP-219	ENST00000588411	RXRB	P28702	533 aa		31.54	■■■□□ 2.64
CIRBP-219	ENST00000588411	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.53	■■■□□ 2.64
CIRBP-219	ENST00000588411	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.53	■■■□□ 2.64
CIRBP-219	ENST00000588411	PSME1	Q06323	249 aa		31.53	■■■□□ 2.64
CIRBP-219	ENST00000588411	KRT28	Q7Z3Y7	464 aa		31.52	■■■□□ 2.64
CIRBP-219	ENST00000588411	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.52	■■■□□ 2.64
CIRBP-219	ENST00000588411	SPATA31A3	Q5VYP0	1347 aa		31.49	■■■□□ 2.63
CIRBP-219	ENST00000588411	KIAA1210	Q9ULL0	1709 aa		31.47	■■■□□ 2.63
CIRBP-219	ENST00000588411	WASL	O00401	505 aa	Predicted RBP	31.47	■■■□□ 2.63
CIRBP-219	ENST00000588411	QTRT2	Q9H974	415 aa	Known RBP	31.46	■■■□□ 2.63
CIRBP-219	ENST00000588411	TULP4	Q9NRJ4	1543 aa		31.44	■■■□□ 2.62
CIRBP-219	ENST00000588411	RGPD8	O14715	1765 aa	Predicted RBP	31.44	■■■□□ 2.62
CIRBP-219	ENST00000588411	SBNO1	A3KN83	1393 aa		31.43	■■■□□ 2.62
CIRBP-219	ENST00000588411	TNS3	Q68CZ2	1445 aa		31.43	■■■□□ 2.62
CIRBP-219	ENST00000588411	PMFBP1	Q8TBY8	1022 aa		31.43	■■■□□ 2.62
CIRBP-219	ENST00000588411	USP21	Q9UK80	565 aa		31.43	■■■□□ 2.62
CIRBP-219	ENST00000588411	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.43	■■■□□ 2.62
CIRBP-219	ENST00000588411	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.43	■■■□□ 2.62
CIRBP-219	ENST00000588411	RBM6	P78332	1123 aa	Known RBP	31.42	■■■□□ 2.62
CIRBP-219	ENST00000588411	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.41	■■■□□ 2.62
CIRBP-219	ENST00000588411	USP32	Q8NFA0	1604 aa		31.41	■■■□□ 2.62
CIRBP-219	ENST00000588411	L3MBTL2	Q969R5	705 aa		31.4	■■■□□ 2.62
CIRBP-219	ENST00000588411	ARHGEF10	O15013	1369 aa		31.4	■■■□□ 2.62
CIRBP-219	ENST00000588411	GPRASP1	Q5JY77	1395 aa		31.4	■■■□□ 2.62
CIRBP-219	ENST00000588411	HAP1	P54257	671 aa	Predicted RBP	31.39	■■■□□ 2.62
CIRBP-219	ENST00000588411	SIN3A	Q96ST3	1273 aa		31.39	■■■□□ 2.62
CIRBP-219	ENST00000588411	NEUROD1	Q13562	356 aa		31.38	■■■□□ 2.61
CIRBP-219	ENST00000588411	NBPF1	Q3BBV0	1214 aa		31.38	■■■□□ 2.61
CIRBP-219	ENST00000588411	LMOD2	Q6P5Q4	547 aa		31.38	■■■□□ 2.61
CIRBP-219	ENST00000588411	TRPC5	Q9UL62	973 aa	Predicted RBP	31.38	■■■□□ 2.61
CIRBP-219	ENST00000588411	PRR36	Q9H6K5	1346 aa		31.38	■■■□□ 2.61
CIRBP-219	ENST00000588411	NGDN	Q8NEJ9	315 aa	Known RBP	31.35	■■■□□ 2.61
CIRBP-219	ENST00000588411	TRIM26	Q12899	539 aa	Predicted RBP	31.32	■■■□□ 2.6
CIRBP-219	ENST00000588411	NUDT16	Q96DE0	195 aa	Known RBP	31.32	■■■□□ 2.6
CIRBP-219	ENST00000588411	CDK19	Q9BWU1	502 aa		31.32	■■■□□ 2.6
CIRBP-219	ENST00000588411	MARF1	Q9Y4F3	1742 aa	Known RBP	31.29	■■■□□ 2.6
CIRBP-219	ENST00000588411	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.29	■■■□□ 2.6
CIRBP-219	ENST00000588411	ATP7B	P35670	1465 aa		31.29	■■■□□ 2.6
CIRBP-219	ENST00000588411	ATRN	O75882	1429 aa		31.29	■■■□□ 2.6
CIRBP-219	ENST00000588411	RGS12	O14924	1447 aa		31.28	■■■□□ 2.6
CIRBP-219	ENST00000588411	BCL9L	Q86UU0	1499 aa		31.27	■■■□□ 2.6
CIRBP-219	ENST00000588411	ITSN1	Q15811	1721 aa		31.27	■■■□□ 2.6
CIRBP-219	ENST00000588411	PLEKHG5	O94827	1062 aa		31.26	■■■□□ 2.59
CIRBP-219	ENST00000588411	CABLES1	Q8TDN4	633 aa		31.26	■■■□□ 2.59
CIRBP-219	ENST00000588411	CCDC61	Q9Y6R9	512 aa		31.25	■■■□□ 2.59
CIRBP-219	ENST00000588411	PAK3	O75914	559 aa	Predicted RBP	31.23	■■■□□ 2.59
CIRBP-219	ENST00000588411	UNC5CL	Q8IV45	518 aa		31.23	■■■□□ 2.59
CIRBP-219	ENST00000588411	ROCK2	O75116	1388 aa	Known RBP	31.22	■■■□□ 2.59
CIRBP-219	ENST00000588411	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.22	■■■□□ 2.59
CIRBP-219	ENST00000588411	SLIT2	O94813	1529 aa		31.21	■■■□□ 2.59
CIRBP-219	ENST00000588411	SRPK2	P78362	688 aa	Known RBP	31.21	■■■□□ 2.59
CIRBP-219	ENST00000588411	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.2	■■■□□ 2.59
CIRBP-219	ENST00000588411	TRPM1	Q7Z4N2	1603 aa		31.18	■■■□□ 2.58
CIRBP-219	ENST00000588411	GJD4	Q96KN9	370 aa	Predicted RBP	31.18	■■■□□ 2.58
CIRBP-219	ENST00000588411	POLR3A	O14802	1390 aa	Predicted RBP	31.17	■■■□□ 2.58
CIRBP-219	ENST00000588411	ALS2	Q96Q42	1657 aa		31.16	■■■□□ 2.58
CIRBP-219	ENST00000588411	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.16	■■■□□ 2.58
CIRBP-219	ENST00000588411	PLEKHG3	A1L390	1219 aa		31.16	■■■□□ 2.58
CIRBP-219	ENST00000588411	ACE	P12821	1306 aa		31.15	■■■□□ 2.58
CIRBP-219	ENST00000588411	TONSL	Q96HA7	1378 aa		31.15	■■■□□ 2.58

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