RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.3	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	SPATA31D1	Q6ZQQ2	1576 aa		12.3	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	CRBN	Q96SW2	442 aa		12.3	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	EID1	Q9Y6B2	187 aa		12.3	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	HDGF	P51858	240 aa	Known RBP	12.29	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	POLR1A	O95602	1720 aa	Predicted RBP	12.29	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	NLRP1	Q9C000	1473 aa		12.29	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	PRDM4	Q9UKN5	801 aa		12.29	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	TRPM2	O94759	1503 aa		12.29	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	TXNDC2	Q86VQ3	553 aa		12.28	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	SYNM	O15061	1565 aa		12.28	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	SETD1B	Q9UPS6	1966 aa	Known RBP	12.28	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	SPHKAP	Q2M3C7	1700 aa		12.28	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	CALD1	Q05682	793 aa	Known RBP	12.27	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	CHMP4B	Q9H444	224 aa	Known RBP	12.27	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	C20orf194	Q5TEA3	1177 aa		12.26	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	ANKLE2	Q86XL3	938 aa		12.26	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	A2ML1	A8K2U0	1454 aa		12.26	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	SPATA31E1	Q6ZUB1	1445 aa		12.26	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	CLTCL1	P53675	1640 aa		12.25	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.25	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	VGF	O15240	615 aa	Predicted RBP	12.24	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	NCKAP5L	Q9HCH0	1330 aa		12.23	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.23	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	PIK3C2B	O00750	1634 aa		12.23	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	TMEM2	Q9UHN6	1383 aa		12.23	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	RIMS2	Q9UQ26	1411 aa		12.22	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	MYO3A	Q8NEV4	1616 aa		12.22	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	RPGRIP1L	Q68CZ1	1315 aa		12.22	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	LTK	P29376	864 aa		12.22	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	C8orf34	Q49A92	452 aa		12.22	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	SLK	Q9H2G2	1235 aa	Predicted RBP	12.22	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	PDCL3	Q9H2J4	239 aa		12.22	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	CANX	P27824	592 aa	Known RBP	12.21	□□□□□ -0.45
CACNA2D4-223	ENST00000588077	ADGRB3	O60242	1522 aa		12.21	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	SLC26A8	Q96RN1	970 aa		12.2	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	ADGRF5	Q8IZF2	1346 aa		12.2	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	USP47	Q96K76	1375 aa		12.19	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	KIF1B	O60333	1816 aa		12.19	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	FAM161A	Q3B820	660 aa		12.19	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	LMTK3	Q96Q04	1460 aa		12.19	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	LRPPRC	P42704	1394 aa	Known RBP	12.19	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	GTF2E1	P29083	439 aa	Predicted RBP	12.18	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	PANK2	Q9BZ23	570 aa		12.18	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	TMEM131L	A2VDJ0	1609 aa		12.18	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	GZF1	Q9H116	711 aa	Predicted RBP	12.17	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	CLCN1	P35523	988 aa		12.16	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	STAC3	Q96MF2	364 aa		12.16	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	CFAP70	Q5T0N1	1121 aa		12.16	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	SCAF11	Q99590	1463 aa	Known RBP	12.16	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	UBR1	Q8IWV7	1749 aa		12.16	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.15	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	KDM2B	Q8NHM5	1336 aa		12.15	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	STK26	Q9P289	416 aa		12.15	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	DMRT2	Q9Y5R5	561 aa		12.15	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.15	□□□□□ -0.46
CACNA2D4-223	ENST00000588077	TMEM132E	Q6IEE7	984 aa		12.14	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	KTN1	Q86UP2	1357 aa	Known RBP	12.14	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	RALGAPB	Q86X10	1494 aa		12.14	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	MYO5B	Q9ULV0	1848 aa		12.13	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	XRCC6	P12956	609 aa	Known RBP eCLIP	12.13	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	L1TD1	Q5T7N2	865 aa	Known RBP	12.13	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	ZFYVE9	O95405	1425 aa		12.13	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	IPO4	Q8TEX9	1081 aa	Known RBP	12.13	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	NPHP4	O75161	1426 aa	Predicted RBP	12.13	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	SPRYD3	Q8NCJ5	442 aa		12.13	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	ZNF142	P52746	1687 aa	Predicted RBP	12.12	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	ARHGAP23	Q9P227	1491 aa		12.12	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	SEC24B	O95487	1268 aa		12.12	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.12	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	SLIT1	O75093	1534 aa		12.12	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	BRD4	O60885	1362 aa	Predicted RBP	12.12	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	PLEKHG1	Q9ULL1	1385 aa		12.12	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	NEXMIF	Q5QGS0	1516 aa		12.12	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	NBPF1	Q3BBV0	1214 aa		12.11	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	NCBP3	Q53F19	620 aa	Known RBP	12.11	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.11	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	CARD11	Q9BXL7	1154 aa		12.11	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	ST20-MTHFS	A0A0A6YYL1	179 aa		12.1	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	PDE3B	Q13370	1112 aa		12.1	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	C14orf93	Q9H972	538 aa	Known RBP	12.1	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	TBX22	Q9Y458	520 aa		12.1	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	ROCK2	O75116	1388 aa	Known RBP	12.1	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	TRAK1	Q9UPV9	953 aa		12.09	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	USP19	O94966	1318 aa		12.09	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	KDM5A	P29375	1690 aa	Known RBP	12.09	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	TPM2	P07951	284 aa		12.09	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	NCL	P19338	710 aa	Known RBP	12.09	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	CC2D1B	Q5T0F9	858 aa	Known RBP	12.09	□□□□□ -0.47
CACNA2D4-223	ENST00000588077	PRAG1	Q86YV5	1406 aa		12.08	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	C14orf37	Q86TY3	774 aa		12.08	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	DHX37	Q8IY37	1157 aa	Known RBP	12.08	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	PHF23	Q9BUL5	403 aa	Predicted RBP	12.08	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	MYOM2	P54296	1465 aa		12.08	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	NEURL4	Q96JN8	1562 aa		12.08	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	RALBP1	Q15311	655 aa		12.08	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	PLCD3	Q8N3E9	789 aa		12.08	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	GOLGA6L3	A6NEY3	463 aa		12.07	□□□□□ -0.48
CACNA2D4-223	ENST00000588077	NLRP13	Q86W25	1043 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms