RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 LILRB3O75022 631 aa7.46□□□□□ -1.22
LINC01538-201ENST00000588074 RBM42Q9BTD8 480 aaKnown RBP7.46□□□□□ -1.22
LINC01538-201ENST00000588074 SPTLC1O15269 473 aa7.46□□□□□ -1.22
LINC01538-201ENST00000588074 HSP90AA1P07900 732 aaKnown RBP7.46□□□□□ -1.22
LINC01538-201ENST00000588074 SERPINB4P48594 390 aa7.46□□□□□ -1.22
LINC01538-201ENST00000588074 STAC3Q96MF2 364 aa7.46□□□□□ -1.22
LINC01538-201ENST00000588074 GIMAP6Q6P9H5 292 aa7.44□□□□□ -1.22
LINC01538-201ENST00000588074 C8orf37Q96NL8 207 aa7.44□□□□□ -1.22
LINC01538-201ENST00000588074 ADGRG1Q9Y653 693 aa7.44□□□□□ -1.22
LINC01538-201ENST00000588074 CADPSQ9ULU8 1353 aa7.44□□□□□ -1.22
LINC01538-201ENST00000588074 PADI6Q6TGC4 694 aa7.44□□□□□ -1.22
LINC01538-201ENST00000588074 EPS8L1Q8TE68 723 aa7.44□□□□□ -1.22
LINC01538-201ENST00000588074 NPAS4Q8IUM7 802 aa7.43□□□□□ -1.22
LINC01538-201ENST00000588074 RECKO95980 971 aa7.43□□□□□ -1.22
LINC01538-201ENST00000588074 WASHC4Q2M389 1173 aa7.43□□□□□ -1.22
LINC01538-201ENST00000588074 ZNF662Q6ZS27 426 aa7.43□□□□□ -1.22
LINC01538-201ENST00000588074 PAK3O75914 559 aaPredicted RBP7.42□□□□□ -1.22
LINC01538-201ENST00000588074 PRKAR2AP13861 404 aaKnown RBP7.42□□□□□ -1.22
LINC01538-201ENST00000588074 TMEM92Q6UXU6 159 aa7.42□□□□□ -1.22
LINC01538-201ENST00000588074 NAALADL2Q58DX5 795 aa7.42□□□□□ -1.22
LINC01538-201ENST00000588074 SECISBP2LQ93073 1101 aaKnown RBP7.42□□□□□ -1.22
LINC01538-201ENST00000588074 SOWAHDA6NJG2 315 aa7.41□□□□□ -1.22
LINC01538-201ENST00000588074 C7P10643 843 aa7.41□□□□□ -1.22
LINC01538-201ENST00000588074 CTDSPL2Q05D32 466 aa7.41□□□□□ -1.22
LINC01538-201ENST00000588074 DIXDC1Q155Q3 683 aa7.41□□□□□ -1.22
LINC01538-201ENST00000588074 KANK4Q5T7N3 995 aaPredicted RBP7.41□□□□□ -1.22
LINC01538-201ENST00000588074 ANKRD33BA6NCL7 494 aa7.41□□□□□ -1.22
LINC01538-201ENST00000588074 KDM4AO75164 1064 aa7.41□□□□□ -1.22
LINC01538-201ENST00000588074 TUSC1Q2TAM9 212 aa7.41□□□□□ -1.22
LINC01538-201ENST00000588074 BRPF3Q9ULD4 1205 aa7.41□□□□□ -1.22
LINC01538-201ENST00000588074 OATP04181 439 aa7.4□□□□□ -1.22
LINC01538-201ENST00000588074 NEFMP07197 916 aa7.4□□□□□ -1.22
LINC01538-201ENST00000588074 ZC3H6P61129 1189 aaKnown RBP7.4□□□□□ -1.22
LINC01538-201ENST00000588074 MARSP56192 900 aaKnown RBP7.4□□□□□ -1.23
LINC01538-201ENST00000588074 PDCD7Q8N8D1 485 aaKnown RBP7.4□□□□□ -1.23
LINC01538-201ENST00000588074 NUTM2BA6NNL0 878 aaPredicted RBP7.39□□□□□ -1.23
LINC01538-201ENST00000588074 NUTM2EB1AL46 878 aaPredicted RBP7.39□□□□□ -1.23
LINC01538-201ENST00000588074 SSFA2P28290 1259 aa7.39□□□□□ -1.23
LINC01538-201ENST00000588074 NUTM2DQ5VT03 806 aaPredicted RBP7.39□□□□□ -1.23
LINC01538-201ENST00000588074 NUTM2AQ8IVF1 878 aaPredicted RBP7.39□□□□□ -1.23
LINC01538-201ENST00000588074 LRRN4Q8WUT4 740 aa7.39□□□□□ -1.23
LINC01538-201ENST00000588074 CD46P15529 392 aa7.39□□□□□ -1.23
LINC01538-201ENST00000588074 ERCC3P19447 782 aa7.39□□□□□ -1.23
LINC01538-201ENST00000588074 UBXN4Q92575 508 aa7.39□□□□□ -1.23
LINC01538-201ENST00000588074 MS4A3Q96HJ5 214 aa7.39□□□□□ -1.23
LINC01538-201ENST00000588074 L3MBTL3Q96JM7 780 aaPredicted RBP7.39□□□□□ -1.23
LINC01538-201ENST00000588074 PCDHGA10Q9Y5H3 936 aa7.39□□□□□ -1.23
LINC01538-201ENST00000588074 ANKRD62A6NC57 917 aa7.38□□□□□ -1.23
LINC01538-201ENST00000588074 PIK3CDO00329 1044 aa7.38□□□□□ -1.23
LINC01538-201ENST00000588074 CERS3Q8IU89 383 aa7.38□□□□□ -1.23
LINC01538-201ENST00000588074 TTLL13PA6NNM8 815 aa7.38□□□□□ -1.23
LINC01538-201ENST00000588074 PDCL3Q9H2J4 239 aa7.38□□□□□ -1.23
LINC01538-201ENST00000588074 B4GALNT3Q6L9W6 998 aa7.37□□□□□ -1.23
LINC01538-201ENST00000588074 TMEM121BQ9BXQ6 578 aaPredicted RBP7.37□□□□□ -1.23
LINC01538-201ENST00000588074 NOVA2Q9UNW9 492 aaKnown RBP7.37□□□□□ -1.23
LINC01538-201ENST00000588074 TICAM2Q86XR7 235 aa7.37□□□□□ -1.23
LINC01538-201ENST00000588074 ZRANB1Q9UGI0 708 aa7.37□□□□□ -1.23
LINC01538-201ENST00000588074 ATP9BO43861 1147 aa7.36□□□□□ -1.23
LINC01538-201ENST00000588074 RGS3P49796 1198 aa7.36□□□□□ -1.23
LINC01538-201ENST00000588074 IRX6P78412 446 aaPredicted RBP7.36□□□□□ -1.23
LINC01538-201ENST00000588074 C9orf131Q5VYM1 1079 aa7.36□□□□□ -1.23
LINC01538-201ENST00000588074 ANKRD13AQ8IZ07 590 aa7.36□□□□□ -1.23
LINC01538-201ENST00000588074 CNPY4Q8N129 248 aa7.36□□□□□ -1.23
LINC01538-201ENST00000588074 HIRIP3Q9BW71 556 aaPredicted RBP7.36□□□□□ -1.23
LINC01538-201ENST00000588074 BIN2Q9UBW5 565 aaPredicted RBP7.36□□□□□ -1.23
LINC01538-201ENST00000588074 ARID4AP29374 1257 aaPredicted RBP7.35□□□□□ -1.23
LINC01538-201ENST00000588074 TSNAXIP1Q2TAA8 658 aa7.35□□□□□ -1.23
LINC01538-201ENST00000588074 IPO9Q96P70 1041 aaKnown RBP7.35□□□□□ -1.23
LINC01538-201ENST00000588074 PHF14O94880 888 aa7.35□□□□□ -1.23
LINC01538-201ENST00000588074 FAM69CQ0P6D2 419 aa7.35□□□□□ -1.23
LINC01538-201ENST00000588074 ELOAQ14241 798 aaKnown RBP7.35□□□□□ -1.23
LINC01538-201ENST00000588074 FBXO33Q7Z6M2 555 aa7.35□□□□□ -1.23
LINC01538-201ENST00000588074 NUTM1Q86Y26 1132 aa7.35□□□□□ -1.23
LINC01538-201ENST00000588074 CRTC2Q53ET0 693 aaPredicted RBP7.34□□□□□ -1.23
LINC01538-201ENST00000588074 DPH6Q7L8W6 267 aa7.34□□□□□ -1.23
LINC01538-201ENST00000588074 HLA-CQ95604 372 aa7.34□□□□□ -1.23
LINC01538-201ENST00000588074 ZC3H4Q9UPT8 1303 aaKnown RBP7.34□□□□□ -1.24
LINC01538-201ENST00000588074 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
LINC01538-201ENST00000588074 ZCCHC6Q5VYS8 1495 aaKnown RBP7.33□□□□□ -1.24
LINC01538-201ENST00000588074 VAMP1P23763 118 aa7.33□□□□□ -1.24
LINC01538-201ENST00000588074 ANP32AP39687 249 aaKnown RBP7.33□□□□□ -1.24
LINC01538-201ENST00000588074 GUCA2AQ02747 115 aa7.33□□□□□ -1.24
LINC01538-201ENST00000588074 TRIM35Q9UPQ4 493 aa7.33□□□□□ -1.24
LINC01538-201ENST00000588074 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.33□□□□□ -1.24
LINC01538-201ENST00000588074 DDX11L8A8MPP1 907 aa7.32□□□□□ -1.24
LINC01538-201ENST00000588074 ITGAEP38570 1179 aa7.32□□□□□ -1.24
LINC01538-201ENST00000588074 SEMA3FQ13275 785 aa7.32□□□□□ -1.24
LINC01538-201ENST00000588074 SMAP1Q8IYB5 467 aaPredicted RBP7.32□□□□□ -1.24
LINC01538-201ENST00000588074 DEPDC4Q8N2C3 294 aa7.32□□□□□ -1.24
LINC01538-201ENST00000588074 SLAIN1Q8ND83 568 aa7.32□□□□□ -1.24
LINC01538-201ENST00000588074 BOLA1Q9Y3E2 137 aa7.32□□□□□ -1.24
LINC01538-201ENST00000588074 CLSTN1O94985 981 aa7.32□□□□□ -1.24
LINC01538-201ENST00000588074 PTMAP06454 111 aaKnown RBP7.32□□□□□ -1.24
LINC01538-201ENST00000588074 GRIPAP1Q4V328 841 aa7.32□□□□□ -1.24
LINC01538-201ENST00000588074 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
LINC01538-201ENST00000588074 DNAJC2Q99543 621 aaKnown RBP7.32□□□□□ -1.24
LINC01538-201ENST00000588074 TSC1Q92574 1164 aa7.31□□□□□ -1.24
LINC01538-201ENST00000588074 EPAS1Q99814 870 aa7.31□□□□□ -1.24
LINC01538-201ENST00000588074 PCDHGC3Q9UN70 934 aa7.31□□□□□ -1.24
LINC01538-201ENST00000588074 CLGNO14967 610 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms