RNA–Protein interactions for RNA: ENST00000587743.1

SNHG16-205, Transcript of small nucleolar RNA host gene 16, humanhuman

Gene SNHG16, Length 2,665 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-205ENST00000587743 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
SNHG16-205ENST00000587743 UHRF1BP1LA0JNW5 1464 aa20.37■□□□□ 0.85
SNHG16-205ENST00000587743 MROH1Q8NDA8 1641 aa20.36■□□□□ 0.85
SNHG16-205ENST00000587743 SHPRHQ149N8 1683 aa20.36■□□□□ 0.85
SNHG16-205ENST00000587743 INO80Q9ULG1 1556 aaPredicted RBP20.36■□□□□ 0.85
SNHG16-205ENST00000587743 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
SNHG16-205ENST00000587743 MTHFSP49914 203 aa20.35■□□□□ 0.85
SNHG16-205ENST00000587743 KIF1BO60333 1816 aa20.35■□□□□ 0.85
SNHG16-205ENST00000587743 NINLQ9Y2I6 1382 aa20.34■□□□□ 0.85
SNHG16-205ENST00000587743 ADGRL1O94910 1474 aa20.33■□□□□ 0.84
SNHG16-205ENST00000587743 NLRP1Q9C000 1473 aa20.33■□□□□ 0.84
SNHG16-205ENST00000587743 POGKQ9P215 609 aa20.32■□□□□ 0.84
SNHG16-205ENST00000587743 PDZRN3Q9UPQ7 1066 aa20.32■□□□□ 0.84
SNHG16-205ENST00000587743 CFAP65Q6ZU64 1925 aaKnown RBP20.31■□□□□ 0.84
SNHG16-205ENST00000587743 IFT172Q9UG01 1749 aa20.31■□□□□ 0.84
SNHG16-205ENST00000587743 SBNO2Q9Y2G9 1366 aa20.31■□□□□ 0.84
SNHG16-205ENST00000587743 IQSEC2Q5JU85 1478 aa20.31■□□□□ 0.84
SNHG16-205ENST00000587743 ARAP3Q8WWN8 1544 aa20.31■□□□□ 0.84
SNHG16-205ENST00000587743 NUTM2DQ5VT03 806 aaPredicted RBP20.3■□□□□ 0.84
SNHG16-205ENST00000587743 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
SNHG16-205ENST00000587743 EFCAB6Q5THR3 1501 aa20.3■□□□□ 0.84
SNHG16-205ENST00000587743 NEURL4Q96JN8 1562 aa20.3■□□□□ 0.84
SNHG16-205ENST00000587743 PPRC1Q5VV67 1664 aaKnown RBP20.3■□□□□ 0.84
SNHG16-205ENST00000587743 PMFBP1Q8TBY8 1022 aa20.3■□□□□ 0.84
SNHG16-205ENST00000587743 MYO3AQ8NEV4 1616 aa20.29■□□□□ 0.84
SNHG16-205ENST00000587743 NRXN1Q9ULB1 1477 aa20.29■□□□□ 0.84
SNHG16-205ENST00000587743 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
SNHG16-205ENST00000587743 BECN1Q14457 450 aa20.28■□□□□ 0.84
SNHG16-205ENST00000587743 ABCA9Q8IUA7 1624 aa20.28■□□□□ 0.84
SNHG16-205ENST00000587743 WDR63Q8IWG1 891 aa20.28■□□□□ 0.84
SNHG16-205ENST00000587743 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.83
SNHG16-205ENST00000587743 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.832e-6■□□□□ 9.2
SNHG16-205ENST00000587743 SPRYD3Q8NCJ5 442 aa20.26■□□□□ 0.83
SNHG16-205ENST00000587743 TSR2Q969E8 191 aaKnown RBP20.26■□□□□ 0.83
SNHG16-205ENST00000587743 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
SNHG16-205ENST00000587743 ZNF518AQ6AHZ1 1483 aa20.25■□□□□ 0.83
SNHG16-205ENST00000587743 QRICH2Q9H0J4 1663 aa20.25■□□□□ 0.83
SNHG16-205ENST00000587743 GGT6Q6P531 493 aa20.25■□□□□ 0.83
SNHG16-205ENST00000587743 TBC1D32Q96NH3 1257 aa20.24■□□□□ 0.83
SNHG16-205ENST00000587743 SAFB2Q14151 953 aaKnown RBP eCLIP20.24■□□□□ 0.83
SNHG16-205ENST00000587743 CFAP53Q96M91 514 aa20.24■□□□□ 0.83
SNHG16-205ENST00000587743 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
SNHG16-205ENST00000587743 UPF2Q9HAU5 1272 aaKnown RBP20.23■□□□□ 0.83
SNHG16-205ENST00000587743 ADGRB3O60242 1522 aa20.23■□□□□ 0.83
SNHG16-205ENST00000587743 RWDD1Q9H446 243 aaPredicted RBP20.23■□□□□ 0.83
SNHG16-205ENST00000587743 ANTXR1Q9H6X2 564 aa20.23■□□□□ 0.83
SNHG16-205ENST00000587743 MVPQ14764 893 aaKnown RBP20.22■□□□□ 0.83
SNHG16-205ENST00000587743 ADGRB1O14514 1584 aa20.21■□□□□ 0.83
SNHG16-205ENST00000587743 SETBP1Q9Y6X0 1596 aa20.21■□□□□ 0.83
SNHG16-205ENST00000587743 CCDC27Q2M243 656 aa20.21■□□□□ 0.83
SNHG16-205ENST00000587743 FTSJ3Q8IY81 847 aaKnown RBP20.21■□□□□ 0.83
SNHG16-205ENST00000587743 CABP2Q9NPB3 220 aa20.21■□□□□ 0.83
SNHG16-205ENST00000587743 KIDINS220Q9ULH0 1771 aa20.21■□□□□ 0.83
SNHG16-205ENST00000587743 NPATQ14207 1427 aa20.21■□□□□ 0.83
SNHG16-205ENST00000587743 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
SNHG16-205ENST00000587743 ZC3H13Q5T200 1668 aaKnown RBP20.2■□□□□ 0.82
SNHG16-205ENST00000587743 ZKSCAN2Q63HK3 967 aa20.19■□□□□ 0.82
SNHG16-205ENST00000587743 ARXQ96QS3 562 aa20.19■□□□□ 0.82
SNHG16-205ENST00000587743 U2SURPO15042 1029 aaKnown RBP20.18■□□□□ 0.82
SNHG16-205ENST00000587743 AAMPQ13685 434 aa20.18■□□□□ 0.82
SNHG16-205ENST00000587743 DZIP1LQ8IYY4 767 aaKnown RBP20.18■□□□□ 0.82
SNHG16-205ENST00000587743 EXOSC9Q06265 439 aaKnown RBP20.17■□□□□ 0.82
SNHG16-205ENST00000587743 SMC4Q9NTJ3 1288 aa20.17■□□□□ 0.82
SNHG16-205ENST00000587743 PPLO60437 1756 aa20.17■□□□□ 0.82
SNHG16-205ENST00000587743 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
SNHG16-205ENST00000587743 TRIM27P14373 513 aa20.15■□□□□ 0.82
SNHG16-205ENST00000587743 GGNBP2Q9H3C7 697 aa20.15■□□□□ 0.82
SNHG16-205ENST00000587743 EVC2Q86UK5 1308 aa20.15■□□□□ 0.82
SNHG16-205ENST00000587743 ITPRIPQ8IWB1 547 aa20.14■□□□□ 0.82
SNHG16-205ENST00000587743 LMTK2Q8IWU2 1503 aa20.14■□□□□ 0.81
SNHG16-205ENST00000587743 SSH1Q8WYL5 1049 aa20.14■□□□□ 0.81
SNHG16-205ENST00000587743 ASXL2Q76L83 1435 aa20.14■□□□□ 0.81
SNHG16-205ENST00000587743 ANKRD36BQ8N2N9 1353 aa20.14■□□□□ 0.81
SNHG16-205ENST00000587743 TULP4Q9NRJ4 1543 aa20.14■□□□□ 0.81
SNHG16-205ENST00000587743 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
SNHG16-205ENST00000587743 STK26Q9P289 416 aa20.12■□□□□ 0.81
SNHG16-205ENST00000587743 USP32Q8NFA0 1604 aa20.12■□□□□ 0.81
SNHG16-205ENST00000587743 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
SNHG16-205ENST00000587743 PLEKHF1Q96S99 279 aa20.11■□□□□ 0.81
SNHG16-205ENST00000587743 PRKCSHP14314 528 aaPredicted RBP20.11■□□□□ 0.81
SNHG16-205ENST00000587743 TMPOP42166 694 aaKnown RBP20.11■□□□□ 0.81
SNHG16-205ENST00000587743 C22orf23Q9BZE7 217 aa20.11■□□□□ 0.81
SNHG16-205ENST00000587743 GLI2P10070 1586 aa20.11■□□□□ 0.81
SNHG16-205ENST00000587743 NOB1Q9ULX3 412 aaKnown RBP20.1■□□□□ 0.81
SNHG16-205ENST00000587743 ZMYM3Q14202 1370 aa20.1■□□□□ 0.81
SNHG16-205ENST00000587743 GZF1Q9H116 711 aaPredicted RBP20.1■□□□□ 0.81
SNHG16-205ENST00000587743 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
SNHG16-205ENST00000587743 ADGRB2O60241 1585 aa20.09■□□□□ 0.81
SNHG16-205ENST00000587743 SRPK2P78362 688 aaKnown RBP20.09■□□□□ 0.81
SNHG16-205ENST00000587743 ATF7IPQ6VMQ6 1270 aa20.08■□□□□ 0.81
SNHG16-205ENST00000587743 FAM43AQ8N2R8 423 aa20.08■□□□□ 0.81
SNHG16-205ENST00000587743 TMEM57Q8N5G2 664 aa20.08■□□□□ 0.81
SNHG16-205ENST00000587743 EIF5BO60841 1220 aaKnown RBP20.08■□□□□ 0.8
SNHG16-205ENST00000587743 FRMPD1Q5SYB0 1578 aa20.07■□□□□ 0.8
SNHG16-205ENST00000587743 ARHGEF28Q8N1W1 1705 aaKnown RBP20.06■□□□□ 0.8
SNHG16-205ENST00000587743 RPGRIP1LQ68CZ1 1315 aa20.06■□□□□ 0.8
SNHG16-205ENST00000587743 NSD2O96028 1365 aa20.06■□□□□ 0.8
SNHG16-205ENST00000587743 HDAC1Q13547 482 aaPredicted RBP20.06■□□□□ 0.8
SNHG16-205ENST00000587743 DDX19BQ9UMR2 479 aa20.06■□□□□ 0.8
SNHG16-205ENST00000587743 MCM4P33991 863 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms