RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 TRPC5Q9UL62 973 aaPredicted RBP22.7■■□□□ 1.22
SF3A2-202ENST00000586396 VGFO15240 615 aaPredicted RBP22.69■■□□□ 1.22
SF3A2-202ENST00000586396 MYOM2P54296 1465 aa22.68■■□□□ 1.22
SF3A2-202ENST00000586396 ATRNO75882 1429 aa22.68■■□□□ 1.22
SF3A2-202ENST00000586396 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
SF3A2-202ENST00000586396 FNBP4Q8N3X1 1017 aaPredicted RBP22.66■■□□□ 1.22
SF3A2-202ENST00000586396 PXDNQ92626 1479 aa22.65■■□□□ 1.22
SF3A2-202ENST00000586396 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.65■■□□□ 1.22
SF3A2-202ENST00000586396 NPHP3Q7Z494 1330 aa22.64■■□□□ 1.22
SF3A2-202ENST00000586396 FOXD1Q16676 465 aa22.63■■□□□ 1.21
SF3A2-202ENST00000586396 RPGRIP1LQ68CZ1 1315 aa22.62■■□□□ 1.21
SF3A2-202ENST00000586396 ESCO1Q5FWF5 840 aa22.61■■□□□ 1.21
SF3A2-202ENST00000586396 BCL9LQ86UU0 1499 aa22.6■■□□□ 1.21
SF3A2-202ENST00000586396 KNDC1Q76NI1 1749 aa22.6■■□□□ 1.21
SF3A2-202ENST00000586396 ZRANB1Q9UGI0 708 aa22.59■■□□□ 1.21
SF3A2-202ENST00000586396 KIF1AQ12756 1690 aa22.58■■□□□ 1.2
SF3A2-202ENST00000586396 IFT172Q9UG01 1749 aa22.57■■□□□ 1.2
SF3A2-202ENST00000586396 FMN2Q9NZ56 1722 aa22.57■■□□□ 1.2
SF3A2-202ENST00000586396 XPCQ01831 940 aaPredicted RBP22.56■■□□□ 1.2
SF3A2-202ENST00000586396 LRPPRCP42704 1394 aaKnown RBP22.55■■□□□ 1.2
SF3A2-202ENST00000586396 SLC4A1APQ9BWU0 796 aaKnown RBP22.55■■□□□ 1.2
SF3A2-202ENST00000586396 USP32Q8NFA0 1604 aa22.55■■□□□ 1.2
SF3A2-202ENST00000586396 FOXO3O43524 673 aa22.54■■□□□ 1.2
SF3A2-202ENST00000586396 TECPR2O15040 1411 aa22.54■■□□□ 1.2
SF3A2-202ENST00000586396 GLI3P10071 1580 aa22.54■■□□□ 1.2
SF3A2-202ENST00000586396 BRWD3Q6RI45 1802 aa22.52■■□□□ 1.2
SF3A2-202ENST00000586396 CCDC125Q86Z20 511 aa22.52■■□□□ 1.2
SF3A2-202ENST00000586396 GJD4Q96KN9 370 aaPredicted RBP22.52■■□□□ 1.2
SF3A2-202ENST00000586396 NUTM2FA1L443 756 aa22.51■■□□□ 1.19
SF3A2-202ENST00000586396 RALGAPBQ86X10 1494 aa22.51■■□□□ 1.19
SF3A2-202ENST00000586396 SLIT2O94813 1529 aa22.5■■□□□ 1.19
SF3A2-202ENST00000586396 CCDC144AA2RUR9 1427 aa22.49■■□□□ 1.19
SF3A2-202ENST00000586396 PLCH1Q4KWH8 1693 aa22.49■■□□□ 1.19
SF3A2-202ENST00000586396 STK26Q9P289 416 aa22.48■■□□□ 1.19
SF3A2-202ENST00000586396 ADGRF5Q8IZF2 1346 aa22.48■■□□□ 1.19
SF3A2-202ENST00000586396 ABCA3Q99758 1704 aa22.48■■□□□ 1.19
SF3A2-202ENST00000586396 BLMP54132 1417 aaPredicted RBP22.48■■□□□ 1.19
SF3A2-202ENST00000586396 WAPLQ7Z5K2 1190 aa22.47■■□□□ 1.19
SF3A2-202ENST00000586396 RGPD8O14715 1765 aaPredicted RBP22.47■■□□□ 1.19
SF3A2-202ENST00000586396 UNC5CLQ8IV45 518 aa22.46■■□□□ 1.19
SF3A2-202ENST00000586396 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.19
SF3A2-202ENST00000586396 ACIN1Q9UKV3 1341 aaKnown RBP22.45■■□□□ 1.18
SF3A2-202ENST00000586396 ANKRD30BQ9BXX2 1392 aa22.45■■□□□ 1.18
SF3A2-202ENST00000586396 PLEKHH1Q9ULM0 1364 aa22.45■■□□□ 1.18
SF3A2-202ENST00000586396 PIK3C2GO75747 1445 aa22.44■■□□□ 1.18
SF3A2-202ENST00000586396 SPATA31A3Q5VYP0 1347 aa22.44■■□□□ 1.18
SF3A2-202ENST00000586396 SPATA31E1Q6ZUB1 1445 aa22.44■■□□□ 1.18
SF3A2-202ENST00000586396 ABCC11Q96J66 1382 aa22.44■■□□□ 1.18
SF3A2-202ENST00000586396 TNS3Q68CZ2 1445 aa22.43■■□□□ 1.18
SF3A2-202ENST00000586396 RGL3Q3MIN7 710 aa22.42■■□□□ 1.18
SF3A2-202ENST00000586396 YTHDC2Q9H6S0 1430 aaKnown RBP22.41■■□□□ 1.18
SF3A2-202ENST00000586396 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
SF3A2-202ENST00000586396 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
SF3A2-202ENST00000586396 LRP5O75197 1615 aa22.39■■□□□ 1.17
SF3A2-202ENST00000586396 SF3B2Q13435 895 aaKnown RBP22.38■■□□□ 1.17
SF3A2-202ENST00000586396 KRT28Q7Z3Y7 464 aa22.38■■□□□ 1.17
SF3A2-202ENST00000586396 NRXN1Q9ULB1 1477 aa22.35■■□□□ 1.17
SF3A2-202ENST00000586396 DEFB132Q7Z7B7 95 aa22.35■■□□□ 1.17
SF3A2-202ENST00000586396 SEPT12Q8IYM1 358 aa22.35■■□□□ 1.17
SF3A2-202ENST00000586396 NRAPQ86VF7 1730 aa22.34■■□□□ 1.17
SF3A2-202ENST00000586396 PLEKHG5O94827 1062 aa22.34■■□□□ 1.17
SF3A2-202ENST00000586396 VPS72Q15906 364 aa22.34■■□□□ 1.17
SF3A2-202ENST00000586396 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
SF3A2-202ENST00000586396 PSME1Q06323 249 aa22.33■■□□□ 1.17
SF3A2-202ENST00000586396 PHF8Q9UPP1 1060 aa22.33■■□□□ 1.17
SF3A2-202ENST00000586396 ARHGEF10O15013 1369 aa22.33■■□□□ 1.17
SF3A2-202ENST00000586396 CABLES1Q8TDN4 633 aa22.32■■□□□ 1.16
SF3A2-202ENST00000586396 SBNO1A3KN83 1393 aa22.31■■□□□ 1.16
SF3A2-202ENST00000586396 LMOD2Q6P5Q4 547 aa22.31■■□□□ 1.16
SF3A2-202ENST00000586396 ADGRB2O60241 1585 aa22.29■■□□□ 1.16
SF3A2-202ENST00000586396 TRPM3Q9HCF6 1732 aaPredicted RBP22.29■■□□□ 1.16
SF3A2-202ENST00000586396 A0A0G2JS52 829 aa22.29■■□□□ 1.16
SF3A2-202ENST00000586396 MYT1Q01538 1121 aa22.29■■□□□ 1.16
SF3A2-202ENST00000586396 KRT27Q7Z3Y8 459 aa22.29■■□□□ 1.16
SF3A2-202ENST00000586396 RGPD1P0DJD0 1748 aa22.28■■□□□ 1.16
SF3A2-202ENST00000586396 COL14A1Q05707 1796 aaKnown RBP22.27■■□□□ 1.16
SF3A2-202ENST00000586396 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
SF3A2-202ENST00000586396 SIRT1Q96EB6 747 aa22.27■■□□□ 1.16
SF3A2-202ENST00000586396 MPHOSPH9Q99550 1183 aa22.27■■□□□ 1.16
SF3A2-202ENST00000586396 ALS2Q96Q42 1657 aa22.26■■□□□ 1.15
SF3A2-202ENST00000586396 ANKARQ7Z5J8 1434 aa22.26■■□□□ 1.15
SF3A2-202ENST00000586396 SAFB2Q14151 953 aaKnown RBP eCLIP22.26■■□□□ 1.15
SF3A2-202ENST00000586396 DLC1Q96QB1 1528 aa22.26■■□□□ 1.15
SF3A2-202ENST00000586396 ONECUT3O60422 494 aaPredicted RBP22.24■■□□□ 1.15
SF3A2-202ENST00000586396 PRAM1Q96QH2 718 aa22.24■■□□□ 1.15
SF3A2-202ENST00000586396 C14orf93Q9H972 538 aaKnown RBP22.24■■□□□ 1.15
SF3A2-202ENST00000586396 BAG6P46379 1132 aa22.23■■□□□ 1.15
SF3A2-202ENST00000586396 CRYBG1Q9Y4K1 1723 aa22.23■■□□□ 1.15
SF3A2-202ENST00000586396 CFAP70Q5T0N1 1121 aa22.22■■□□□ 1.15
SF3A2-202ENST00000586396 TNS1Q9HBL0 1735 aaKnown RBP22.21■■□□□ 1.15
SF3A2-202ENST00000586396 HRCP23327 699 aa22.21■■□□□ 1.15
SF3A2-202ENST00000586396 FAM98CQ17RN3 349 aaKnown RBP22.21■■□□□ 1.15
SF3A2-202ENST00000586396 PMFBP1Q8TBY8 1022 aa22.21■■□□□ 1.15
SF3A2-202ENST00000586396 FAM83GA6ND36 823 aa22.2■■□□□ 1.14
SF3A2-202ENST00000586396 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
SF3A2-202ENST00000586396 PSDA5PKW4 1024 aaPredicted RBP22.19■■□□□ 1.14
SF3A2-202ENST00000586396 BTG4Q9NY30 223 aa22.19■■□□□ 1.14
SF3A2-202ENST00000586396 POGKQ9P215 609 aa22.19■■□□□ 1.14
SF3A2-202ENST00000586396 THSD7AQ9UPZ6 1657 aa22.19■■□□□ 1.14
SF3A2-202ENST00000586396 TULP4Q9NRJ4 1543 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms