RNA–Protein interactions for RNA: ENST00000586144.1

CXXC1-203, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-203ENST00000586144 ABCC11Q96J66 1382 aa21.84■■□□□ 1.09
CXXC1-203ENST00000586144 SHPRHQ149N8 1683 aa21.83■■□□□ 1.09
CXXC1-203ENST00000586144 NUTM2FA1L443 756 aa21.83■■□□□ 1.09
CXXC1-203ENST00000586144 KNDC1Q76NI1 1749 aa21.83■■□□□ 1.08
CXXC1-203ENST00000586144 NUTM2BA6NNL0 878 aaPredicted RBP21.81■■□□□ 1.08
CXXC1-203ENST00000586144 NUTM2EB1AL46 878 aaPredicted RBP21.81■■□□□ 1.08
CXXC1-203ENST00000586144 NUTM2AQ8IVF1 878 aaPredicted RBP21.81■■□□□ 1.08
CXXC1-203ENST00000586144 DCAF11Q8TEB1 546 aa21.81■■□□□ 1.08
CXXC1-203ENST00000586144 CDC42BPGQ6DT37 1551 aa21.79■■□□□ 1.08
CXXC1-203ENST00000586144 DHX57Q6P158 1386 aaKnown RBP21.79■■□□□ 1.08
CXXC1-203ENST00000586144 SPATA31A6Q5VVP1 1343 aa21.79■■□□□ 1.08
CXXC1-203ENST00000586144 SAFB2Q14151 953 aaKnown RBP eCLIP21.78■■□□□ 1.08
CXXC1-203ENST00000586144 ESCO1Q5FWF5 840 aa21.77■■□□□ 1.08
CXXC1-203ENST00000586144 MEX3CQ5U5Q3 659 aaKnown RBP21.76■■□□□ 1.07
CXXC1-203ENST00000586144 LAMC1P11047 1609 aa21.76■■□□□ 1.07
CXXC1-203ENST00000586144 ADGRB1O14514 1584 aa21.75■■□□□ 1.07
CXXC1-203ENST00000586144 LRRC59Q96AG4 307 aaKnown RBP21.75■■□□□ 1.07
CXXC1-203ENST00000586144 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
CXXC1-203ENST00000586144 PNPLA6Q8IY17 1366 aa21.74■■□□□ 1.07
CXXC1-203ENST00000586144 XPCQ01831 940 aaPredicted RBP21.74■■□□□ 1.07
CXXC1-203ENST00000586144 SOS2Q07890 1332 aaPredicted RBP21.73■■□□□ 1.07
CXXC1-203ENST00000586144 TRAK1Q9UPV9 953 aa21.72■■□□□ 1.07
CXXC1-203ENST00000586144 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
CXXC1-203ENST00000586144 SIRT1Q96EB6 747 aa21.71■■□□□ 1.07
CXXC1-203ENST00000586144 FOXO3O43524 673 aa21.7■■□□□ 1.06
CXXC1-203ENST00000586144 RGPD8O14715 1765 aaPredicted RBP21.69■■□□□ 1.06
CXXC1-203ENST00000586144 PXDNQ92626 1479 aa21.68■■□□□ 1.06
CXXC1-203ENST00000586144 DLC1Q96QB1 1528 aa21.67■■□□□ 1.06
CXXC1-203ENST00000586144 HIRIP3Q9BW71 556 aaPredicted RBP21.67■■□□□ 1.06
CXXC1-203ENST00000586144 POGKQ9P215 609 aa21.67■■□□□ 1.06
CXXC1-203ENST00000586144 ADAMTS2O95450 1211 aa21.66■■□□□ 1.06
CXXC1-203ENST00000586144 C8orf37Q96NL8 207 aa21.65■■□□□ 1.06
CXXC1-203ENST00000586144 AFF2P51816 1311 aa21.64■■□□□ 1.05
CXXC1-203ENST00000586144 NPHP3Q7Z494 1330 aa21.64■■□□□ 1.05
CXXC1-203ENST00000586144 MINK1Q8N4C8 1332 aaPredicted RBP21.64■■□□□ 1.05
CXXC1-203ENST00000586144 SIN3AQ96ST3 1273 aa21.63■■□□□ 1.05
CXXC1-203ENST00000586144 USP32Q8NFA0 1604 aa21.62■■□□□ 1.05
CXXC1-203ENST00000586144 ZNF772Q68DY9 489 aaPredicted RBP21.61■■□□□ 1.05
CXXC1-203ENST00000586144 NBPF1Q3BBV0 1214 aa21.6■■□□□ 1.05
CXXC1-203ENST00000586144 STAC3Q96MF2 364 aa21.59■■□□□ 1.05
CXXC1-203ENST00000586144 PHF8Q9UPP1 1060 aa21.59■■□□□ 1.05
CXXC1-203ENST00000586144 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.05
CXXC1-203ENST00000586144 ARHGEF28Q8N1W1 1705 aaKnown RBP21.58■■□□□ 1.05
CXXC1-203ENST00000586144 ADGRB2O60241 1585 aa21.58■■□□□ 1.05
CXXC1-203ENST00000586144 KRT28Q7Z3Y7 464 aa21.58■■□□□ 1.05
CXXC1-203ENST00000586144 PMFBP1Q8TBY8 1022 aa21.58■■□□□ 1.05
CXXC1-203ENST00000586144 KIF1AQ12756 1690 aa21.58■■□□□ 1.05
CXXC1-203ENST00000586144 PRR36Q9H6K5 1346 aa21.57■■□□□ 1.04
CXXC1-203ENST00000586144 PLEKHG5O94827 1062 aa21.56■■□□□ 1.04
CXXC1-203ENST00000586144 NEUROD1Q13562 356 aa21.56■■□□□ 1.04
CXXC1-203ENST00000586144 L3MBTL2Q969R5 705 aa21.56■■□□□ 1.04
CXXC1-203ENST00000586144 NGLY1Q96IV0 654 aa21.55■■□□□ 1.04
CXXC1-203ENST00000586144 SPATA31A3Q5VYP0 1347 aa21.55■■□□□ 1.04
CXXC1-203ENST00000586144 WASLO00401 505 aaPredicted RBP21.53■■□□□ 1.04
CXXC1-203ENST00000586144 RXRBP28702 533 aa21.53■■□□□ 1.04
CXXC1-203ENST00000586144 QTRT2Q9H974 415 aaKnown RBP21.53■■□□□ 1.04
CXXC1-203ENST00000586144 ANKARQ7Z5J8 1434 aa21.52■■□□□ 1.04
CXXC1-203ENST00000586144 KIAA1210Q9ULL0 1709 aa21.52■■□□□ 1.03
CXXC1-203ENST00000586144 TULP4Q9NRJ4 1543 aa21.5■■□□□ 1.03
CXXC1-203ENST00000586144 CABLES1Q8TDN4 633 aa21.5■■□□□ 1.03
CXXC1-203ENST00000586144 PSME1Q06323 249 aa21.49■■□□□ 1.03
CXXC1-203ENST00000586144 TNS3Q68CZ2 1445 aa21.48■■□□□ 1.03
CXXC1-203ENST00000586144 LMOD2Q6P5Q4 547 aa21.48■■□□□ 1.03
CXXC1-203ENST00000586144 USP21Q9UK80 565 aa21.48■■□□□ 1.03
CXXC1-203ENST00000586144 FNBP4Q8N3X1 1017 aaPredicted RBP21.47■■□□□ 1.03
CXXC1-203ENST00000586144 MARF1Q9Y4F3 1742 aaKnown RBP21.46■■□□□ 1.03
CXXC1-203ENST00000586144 CDK19Q9BWU1 502 aa21.46■■□□□ 1.03
CXXC1-203ENST00000586144 RGS12O14924 1447 aa21.46■■□□□ 1.03
CXXC1-203ENST00000586144 NUDT16Q96DE0 195 aaKnown RBP21.45■■□□□ 1.02
CXXC1-203ENST00000586144 SBNO1A3KN83 1393 aa21.45■■□□□ 1.02
CXXC1-203ENST00000586144 ATP7BP35670 1465 aa21.45■■□□□ 1.02
CXXC1-203ENST00000586144 TRPM3Q9HCF6 1732 aaPredicted RBP21.44■■□□□ 1.02
CXXC1-203ENST00000586144 RBM6P78332 1123 aaKnown RBP21.44■■□□□ 1.02
CXXC1-203ENST00000586144 BCL9LQ86UU0 1499 aa21.44■■□□□ 1.02
CXXC1-203ENST00000586144 ATRNO75882 1429 aa21.42■■□□□ 1.02
CXXC1-203ENST00000586144 EIF3AQ14152 1382 aaKnown RBP21.42■■□□□ 1.02
CXXC1-203ENST00000586144 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
CXXC1-203ENST00000586144 NBPF8Q3BBV2 869 aa21.41■■□□□ 1.02
CXXC1-203ENST00000586144 NGDNQ8NEJ9 315 aaKnown RBP21.41■■□□□ 1.02
CXXC1-203ENST00000586144 ABCA3Q99758 1704 aa21.41■■□□□ 1.02
CXXC1-203ENST00000586144 TRPM1Q7Z4N2 1603 aa21.4■■□□□ 1.02
CXXC1-203ENST00000586144 CDK12Q9NYV4 1490 aaPredicted RBP21.4■■□□□ 1.02
CXXC1-203ENST00000586144 TRPC5Q9UL62 973 aaPredicted RBP21.4■■□□□ 1.02
CXXC1-203ENST00000586144 CENPJQ9HC77 1338 aaPredicted RBP21.39■■□□□ 1.01
CXXC1-203ENST00000586144 ALS2Q96Q42 1657 aa21.39■■□□□ 1.01
CXXC1-203ENST00000586144 GPRASP1Q5JY77 1395 aa21.38■■□□□ 1.01
CXXC1-203ENST00000586144 HAP1P54257 671 aaPredicted RBP21.38■■□□□ 1.01
CXXC1-203ENST00000586144 UPF1Q92900 1129 aaKnown RBP eCLIP21.38■■□□□ 1.01
CXXC1-203ENST00000586144 ARHGEF10O15013 1369 aa21.37■■□□□ 1.01
CXXC1-203ENST00000586144 PAK3O75914 559 aaPredicted RBP21.37■■□□□ 1.01
CXXC1-203ENST00000586144 CABP2Q9NPB3 220 aa21.37■■□□□ 1.01
CXXC1-203ENST00000586144 SLIT2O94813 1529 aa21.37■■□□□ 1.01
CXXC1-203ENST00000586144 TOPAZ1Q8N9V7 1692 aa21.37■■□□□ 1.01
CXXC1-203ENST00000586144 QRICH2Q9H0J4 1663 aa21.37■■□□□ 1.01
CXXC1-203ENST00000586144 ITSN1Q15811 1721 aa21.36■■□□□ 1.01
CXXC1-203ENST00000586144 ACEP12821 1306 aa21.34■■□□□ 1.01
CXXC1-203ENST00000586144 FAM83GA6ND36 823 aa21.34■■□□□ 1.01
CXXC1-203ENST00000586144 UNC5CLQ8IV45 518 aa21.34■■□□□ 1.01
CXXC1-203ENST00000586144 ROCK2O75116 1388 aaKnown RBP21.34■■□□□ 1.01
CXXC1-203ENST00000586144 SRPK2P78362 688 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms