RNA–Protein interactions for RNA: ENST00000585760.5

GCDH-204, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-204ENST00000585760 PTCH1Q13635 1447 aa21.19■□□□□ 0.98
GCDH-204ENST00000585760 ROBO2Q9HCK4 1378 aa21.18■□□□□ 0.98
GCDH-204ENST00000585760 PRAG1Q86YV5 1406 aa21.18■□□□□ 0.98
GCDH-204ENST00000585760 ADAMTS2O95450 1211 aa21.17■□□□□ 0.98
GCDH-204ENST00000585760 C14orf93Q9H972 538 aaKnown RBP21.17■□□□□ 0.98
GCDH-204ENST00000585760 TMEM132EQ6IEE7 984 aa21.15■□□□□ 0.98
GCDH-204ENST00000585760 MYOM2P54296 1465 aa21.14■□□□□ 0.98
GCDH-204ENST00000585760 NRXN1Q9ULB1 1477 aa21.14■□□□□ 0.98
GCDH-204ENST00000585760 ATAD2Q6PL18 1390 aa21.14■□□□□ 0.98
GCDH-204ENST00000585760 STK26Q9P289 416 aa21.14■□□□□ 0.97
GCDH-204ENST00000585760 LRPPRCP42704 1394 aaKnown RBP21.13■□□□□ 0.97
GCDH-204ENST00000585760 STAC3Q96MF2 364 aa21.13■□□□□ 0.97
GCDH-204ENST00000585760 C1orf167Q5SNV9 1468 aa21.13■□□□□ 0.97
GCDH-204ENST00000585760 ABCC11Q96J66 1382 aa21.12■□□□□ 0.97
GCDH-204ENST00000585760 CFAP70Q5T0N1 1121 aa21.12■□□□□ 0.97
GCDH-204ENST00000585760 DCAF11Q8TEB1 546 aa21.12■□□□□ 0.97
GCDH-204ENST00000585760 USP21Q9UK80 565 aa21.12■□□□□ 0.97
GCDH-204ENST00000585760 TRPC5Q9UL62 973 aaPredicted RBP21.11■□□□□ 0.97
GCDH-204ENST00000585760 KDM2AQ9Y2K7 1162 aa21.11■□□□□ 0.97
GCDH-204ENST00000585760 SOS2Q07890 1332 aaPredicted RBP21.1■□□□□ 0.97
GCDH-204ENST00000585760 TECPR2O15040 1411 aa21.1■□□□□ 0.97
GCDH-204ENST00000585760 YTHDC2Q9H6S0 1430 aaKnown RBP21.09■□□□□ 0.97
GCDH-204ENST00000585760 DHX57Q6P158 1386 aaKnown RBP21.09■□□□□ 0.97
GCDH-204ENST00000585760 WAPLQ7Z5K2 1190 aa21.08■□□□□ 0.97
GCDH-204ENST00000585760 NALCNQ8IZF0 1738 aa21.08■□□□□ 0.97
GCDH-204ENST00000585760 FNBP4Q8N3X1 1017 aaPredicted RBP21.08■□□□□ 0.97
GCDH-204ENST00000585760 SIRT1Q96EB6 747 aa21.08■□□□□ 0.97
GCDH-204ENST00000585760 ORAI2Q96SN7 254 aa21.07■□□□□ 0.96
GCDH-204ENST00000585760 ZRANB1Q9UGI0 708 aa21.07■□□□□ 0.96
GCDH-204ENST00000585760 LAMC1P11047 1609 aa21.05■□□□□ 0.96
GCDH-204ENST00000585760 TRIM26Q12899 539 aaPredicted RBP21.04■□□□□ 0.96
GCDH-204ENST00000585760 ATRNO75882 1429 aa21.03■□□□□ 0.96
GCDH-204ENST00000585760 PLEKHH1Q9ULM0 1364 aa21.02■□□□□ 0.96
GCDH-204ENST00000585760 KNDC1Q76NI1 1749 aa21.01■□□□□ 0.95
GCDH-204ENST00000585760 CCDC125Q86Z20 511 aa21.01■□□□□ 0.95
GCDH-204ENST00000585760 CDC42BPGQ6DT37 1551 aa20.97■□□□□ 0.95
GCDH-204ENST00000585760 PRAM1Q96QH2 718 aa20.97■□□□□ 0.95
GCDH-204ENST00000585760 SRCAPQ6ZRS2 3230 aa20.97■□□□□ 0.95
GCDH-204ENST00000585760 NPHP3Q7Z494 1330 aa20.97■□□□□ 0.95
GCDH-204ENST00000585760 ADGRB1O14514 1584 aa20.97■□□□□ 0.95
GCDH-204ENST00000585760 POGKQ9P215 609 aa20.96■□□□□ 0.95
GCDH-204ENST00000585760 TRAK1Q9UPV9 953 aa20.96■□□□□ 0.95
GCDH-204ENST00000585760 COL22A1Q8NFW1 1626 aaPredicted RBP20.96■□□□□ 0.95
GCDH-204ENST00000585760 ESCO1Q5FWF5 840 aa20.95■□□□□ 0.94
GCDH-204ENST00000585760 SIN3AQ96ST3 1273 aa20.95■□□□□ 0.94
GCDH-204ENST00000585760 BCL9LQ86UU0 1499 aa20.94■□□□□ 0.94
GCDH-204ENST00000585760 DLC1Q96QB1 1528 aa20.94■□□□□ 0.94
GCDH-204ENST00000585760 SAFB2Q14151 953 aaKnown RBP eCLIP20.94■□□□□ 0.94
GCDH-204ENST00000585760 GJD4Q96KN9 370 aaPredicted RBP20.94■□□□□ 0.94
GCDH-204ENST00000585760 NUTM2FA1L443 756 aa20.93■□□□□ 0.94
GCDH-204ENST00000585760 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
GCDH-204ENST00000585760 L3MBTL2Q969R5 705 aa20.91■□□□□ 0.94
GCDH-204ENST00000585760 PXDNQ92626 1479 aa20.9■□□□□ 0.94
GCDH-204ENST00000585760 FOXO3O43524 673 aa20.9■□□□□ 0.94
GCDH-204ENST00000585760 XPCQ01831 940 aaPredicted RBP20.89■□□□□ 0.93
GCDH-204ENST00000585760 UNC5CLQ8IV45 518 aa20.87■□□□□ 0.93
GCDH-204ENST00000585760 FMN2Q9NZ56 1722 aa20.86■□□□□ 0.93
GCDH-204ENST00000585760 BLMP54132 1417 aaPredicted RBP20.86■□□□□ 0.93
GCDH-204ENST00000585760 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
GCDH-204ENST00000585760 HIRIP3Q9BW71 556 aaPredicted RBP20.85■□□□□ 0.93
GCDH-204ENST00000585760 MINK1Q8N4C8 1332 aaPredicted RBP20.84■□□□□ 0.93
GCDH-204ENST00000585760 KIAA1210Q9ULL0 1709 aa20.84■□□□□ 0.93
GCDH-204ENST00000585760 MARF1Q9Y4F3 1742 aaKnown RBP20.84■□□□□ 0.93
GCDH-204ENST00000585760 RALGAPBQ86X10 1494 aa20.83■□□□□ 0.93
GCDH-204ENST00000585760 PHF8Q9UPP1 1060 aa20.83■□□□□ 0.93
GCDH-204ENST00000585760 EP400Q96L91 3159 aa20.82■□□□□ 0.92
GCDH-204ENST00000585760 WASLO00401 505 aaPredicted RBP20.81■□□□□ 0.92
GCDH-204ENST00000585760 SF3B2Q13435 895 aaKnown RBP20.81■□□□□ 0.92
GCDH-204ENST00000585760 SLIT2O94813 1529 aa20.81■□□□□ 0.92
GCDH-204ENST00000585760 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.81■□□□□ 0.92
GCDH-204ENST00000585760 ADGRB2O60241 1585 aa20.8■□□□□ 0.92
GCDH-204ENST00000585760 SPATA31A3Q5VYP0 1347 aa20.8■□□□□ 0.92
GCDH-204ENST00000585760 ANKARQ7Z5J8 1434 aa20.79■□□□□ 0.92
GCDH-204ENST00000585760 DEFB132Q7Z7B7 95 aa20.79■□□□□ 0.92
GCDH-204ENST00000585760 GLI3P10071 1580 aa20.79■□□□□ 0.92
GCDH-204ENST00000585760 EIF3AQ14152 1382 aaKnown RBP20.78■□□□□ 0.92
GCDH-204ENST00000585760 KRT28Q7Z3Y7 464 aa20.78■□□□□ 0.92
GCDH-204ENST00000585760 KIF1AQ12756 1690 aa20.77■□□□□ 0.92
GCDH-204ENST00000585760 SEPT12Q8IYM1 358 aa20.77■□□□□ 0.92
GCDH-204ENST00000585760 ARHGEF28Q8N1W1 1705 aaKnown RBP20.77■□□□□ 0.92
GCDH-204ENST00000585760 HAP1P54257 671 aaPredicted RBP20.76■□□□□ 0.91
GCDH-204ENST00000585760 PSME1Q06323 249 aa20.76■□□□□ 0.91
GCDH-204ENST00000585760 VPS72Q15906 364 aa20.75■□□□□ 0.91
GCDH-204ENST00000585760 PMFBP1Q8TBY8 1022 aa20.75■□□□□ 0.91
GCDH-204ENST00000585760 PRR36Q9H6K5 1346 aa20.75■□□□□ 0.91
GCDH-204ENST00000585760 RGPD8O14715 1765 aaPredicted RBP20.74■□□□□ 0.91
GCDH-204ENST00000585760 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
GCDH-204ENST00000585760 USP32Q8NFA0 1604 aa20.73■□□□□ 0.91
GCDH-204ENST00000585760 TULP4Q9NRJ4 1543 aa20.73■□□□□ 0.91
GCDH-204ENST00000585760 ONECUT3O60422 494 aaPredicted RBP20.72■□□□□ 0.91
GCDH-204ENST00000585760 NUDT16Q96DE0 195 aaKnown RBP20.72■□□□□ 0.91
GCDH-204ENST00000585760 CCDC9Q9Y3X0 531 aaKnown RBP20.72■□□□□ 0.91
GCDH-204ENST00000585760 CENPJQ9HC77 1338 aaPredicted RBP20.72■□□□□ 0.91
GCDH-204ENST00000585760 TONSLQ96HA7 1378 aa20.72■□□□□ 0.91
GCDH-204ENST00000585760 NBPF8Q3BBV2 869 aa20.71■□□□□ 0.91
GCDH-204ENST00000585760 KRT27Q7Z3Y8 459 aa20.71■□□□□ 0.91
GCDH-204ENST00000585760 SBNO1A3KN83 1393 aa20.7■□□□□ 0.9
GCDH-204ENST00000585760 ROCK2O75116 1388 aaKnown RBP20.7■□□□□ 0.9
GCDH-204ENST00000585760 TNS3Q68CZ2 1445 aa20.7■□□□□ 0.9
GCDH-204ENST00000585760 BRWD3Q6RI45 1802 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms