RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	ESCO1	Q5FWF5	840 aa		24.39	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	ANKRD30B	Q9BXX2	1392 aa		24.39	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	SETD1A	O15047	1707 aa	Known RBP	24.38	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	RBM6	P78332	1123 aa	Known RBP	24.37	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	LRPPRC	P42704	1394 aa	Known RBP	24.35	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	ABCC11	Q96J66	1382 aa		24.35	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	FOXO3	O43524	673 aa		24.34	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	PPL	O60437	1756 aa		24.34	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	CDK12	Q9NYV4	1490 aa	Predicted RBP	24.33	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	NUTM2F	A1L443	756 aa		24.33	■■□□□ 1.49
PRKAR1A-206	ENST00000585460	NPHP3	Q7Z494	1330 aa		24.32	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	PLEKHH1	Q9ULM0	1364 aa		24.31	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	XPC	Q01831	940 aa	Predicted RBP	24.31	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	FNBP4	Q8N3X1	1017 aa	Predicted RBP	24.31	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	C14orf93	Q9H972	538 aa	Known RBP	24.31	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	TECPR2	O15040	1411 aa		24.3	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	USP21	Q9UK80	565 aa		24.3	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	ACIN1	Q9UKV3	1341 aa	Known RBP	24.3	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	LAMC1	P11047	1609 aa		24.29	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	SIRT1	Q96EB6	747 aa		24.29	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	CFAP70	Q5T0N1	1121 aa		24.27	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	PIK3C2G	O75747	1445 aa		24.27	■■□□□ 1.48
PRKAR1A-206	ENST00000585460	TRPC5	Q9UL62	973 aa	Predicted RBP	24.25	■■□□□ 1.47
PRKAR1A-206	ENST00000585460	RGS12	O14924	1447 aa		24.25	■■□□□ 1.47
PRKAR1A-206	ENST00000585460	YTHDC2	Q9H6S0	1430 aa	Known RBP	24.25	■■□□□ 1.47
PRKAR1A-206	ENST00000585460	CDC42BPG	Q6DT37	1551 aa		24.23	■■□□□ 1.47
PRKAR1A-206	ENST00000585460	PXDN	Q92626	1479 aa		24.22	■■□□□ 1.47
PRKAR1A-206	ENST00000585460	KRT28	Q7Z3Y7	464 aa		24.2	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	MYOM2	P54296	1465 aa		24.19	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	DHX57	Q6P158	1386 aa	Known RBP	24.19	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	SPATA31A3	Q5VYP0	1347 aa		24.18	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	RAB3GAP2	Q9H2M9	1393 aa		24.17	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	PRAM1	Q96QH2	718 aa		24.17	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	ATRN	O75882	1429 aa		24.17	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	NRXN1	Q9ULB1	1477 aa		24.16	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	SAFB2	Q14151	953 aa	Known RBP eCLIP	24.16	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	BCL9L	Q86UU0	1499 aa		24.15	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	PHF8	Q9UPP1	1060 aa		24.15	■■□□□ 1.46
PRKAR1A-206	ENST00000585460	IFT172	Q9UG01	1749 aa		24.14	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	COL22A1	Q8NFW1	1626 aa	Predicted RBP	24.13	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	GJD4	Q96KN9	370 aa	Predicted RBP	24.12	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	POGK	Q9P215	609 aa		24.12	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	PSME1	Q06323	249 aa		24.11	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	KDM2A	Q9Y2K7	1162 aa		24.11	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	ATAD2	Q6PL18	1390 aa		24.09	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	UNC5CL	Q8IV45	518 aa		24.09	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	CABLES1	Q8TDN4	633 aa		24.08	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	TRAK1	Q9UPV9	953 aa		24.08	■■□□□ 1.45
PRKAR1A-206	ENST00000585460	DCAF11	Q8TEB1	546 aa		24.07	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	KNDC1	Q76NI1	1749 aa		24.07	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	PMFBP1	Q8TBY8	1022 aa		24.06	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	PLEKHG5	O94827	1062 aa		24.05	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	HRC	P23327	699 aa		24.05	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	FMN2	Q9NZ56	1722 aa		24.04	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	HIRIP3	Q9BW71	556 aa	Predicted RBP	24.04	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	LMOD2	Q6P5Q4	547 aa		24.03	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	SBNO1	A3KN83	1393 aa		24.03	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	SLIT2	O94813	1529 aa		24.02	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	HAP1	P54257	671 aa	Predicted RBP	24.02	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	STAC3	Q96MF2	364 aa		24.02	■■□□□ 1.44
PRKAR1A-206	ENST00000585460	TNS3	Q68CZ2	1445 aa		24.01	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	MINK1	Q8N4C8	1332 aa	Predicted RBP	24	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	DLC1	Q96QB1	1528 aa		24	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	FAM83G	A6ND36	823 aa		23.99	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	CCDC125	Q86Z20	511 aa		23.99	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	PRR36	Q9H6K5	1346 aa		23.98	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	ADGRB1	O14514	1584 aa		23.98	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	WASL	O00401	505 aa	Predicted RBP	23.97	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	KIF1A	Q12756	1690 aa		23.97	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	VPS72	Q15906	364 aa		23.97	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	ANKAR	Q7Z5J8	1434 aa		23.97	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	RALGAPB	Q86X10	1494 aa		23.96	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	ARHGEF10	O15013	1369 aa		23.96	■■□□□ 1.43
PRKAR1A-206	ENST00000585460	ONECUT3	O60422	494 aa	Predicted RBP	23.95	■■□□□ 1.42
PRKAR1A-206	ENST00000585460	SEPT12	Q8IYM1	358 aa		23.94	■■□□□ 1.42
PRKAR1A-206	ENST00000585460	CCDC9	Q9Y3X0	531 aa	Known RBP	23.91	■■□□□ 1.42
PRKAR1A-206	ENST00000585460	RGPD8	O14715	1765 aa	Predicted RBP	23.91	■■□□□ 1.42
PRKAR1A-206	ENST00000585460	GPRASP1	Q5JY77	1395 aa		23.91	■■□□□ 1.42
PRKAR1A-206	ENST00000585460	MARF1	Q9Y4F3	1742 aa	Known RBP	23.9	■■□□□ 1.42
PRKAR1A-206	ENST00000585460	NGDN	Q8NEJ9	315 aa	Known RBP	23.9	■■□□□ 1.42
PRKAR1A-206	ENST00000585460	ZRANB1	Q9UGI0	708 aa		23.9	■■□□□ 1.42
PRKAR1A-206	ENST00000585460	GLI3	P10071	1580 aa		23.89	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	USP32	Q8NFA0	1604 aa		23.88	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	EIF3A	Q14152	1382 aa	Known RBP	23.88	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	NUDT16	Q96DE0	195 aa	Known RBP	23.87	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	ADGRB2	O60241	1585 aa		23.86	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	PAK3	O75914	559 aa	Predicted RBP	23.86	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	BTG4	Q9NY30	223 aa		23.86	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	KRT27	Q7Z3Y8	459 aa		23.84	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	CDK19	Q9BWU1	502 aa		23.84	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	23.84	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	DEFB132	Q7Z7B7	95 aa		23.83	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	EP400	Q96L91	3159 aa		23.83	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	TULP4	Q9NRJ4	1543 aa		23.83	■■□□□ 1.41
PRKAR1A-206	ENST00000585460	BLM	P54132	1417 aa	Predicted RBP	23.82	■■□□□ 1.4
PRKAR1A-206	ENST00000585460	FAM98C	Q17RN3	349 aa	Known RBP	23.81	■■□□□ 1.4
PRKAR1A-206	ENST00000585460	NBPF1	Q3BBV0	1214 aa		23.81	■■□□□ 1.4
PRKAR1A-206	ENST00000585460	SRCAP	Q6ZRS2	3230 aa		23.8	■■□□□ 1.4
PRKAR1A-206	ENST00000585460	NBPF8	Q3BBV2	869 aa		23.78	■■□□□ 1.4
PRKAR1A-206	ENST00000585460		A0A0G2JS52	829 aa		23.77	■■□□□ 1.4

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms