RNA–Protein interactions for RNA: ENST00000585375.1

GHDC-204, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-204ENST00000585375 SIRT1Q96EB6 747 aa23.59■■□□□ 1.37
GHDC-204ENST00000585375 STK26Q9P289 416 aa23.59■■□□□ 1.37
GHDC-204ENST00000585375 TMEM132EQ6IEE7 984 aa23.58■■□□□ 1.37
GHDC-204ENST00000585375 SOS2Q07890 1332 aaPredicted RBP23.58■■□□□ 1.36
GHDC-204ENST00000585375 PNPLA6Q8IY17 1366 aa23.57■■□□□ 1.36
GHDC-204ENST00000585375 ZNF772Q68DY9 489 aaPredicted RBP23.57■■□□□ 1.36
GHDC-204ENST00000585375 ORAI2Q96SN7 254 aa23.57■■□□□ 1.36
GHDC-204ENST00000585375 DDX17Q92841 729 aaKnown RBP23.56■■□□□ 1.36
GHDC-204ENST00000585375 DHX57Q6P158 1386 aaKnown RBP23.55■■□□□ 1.36
GHDC-204ENST00000585375 WAPLQ7Z5K2 1190 aa23.55■■□□□ 1.36
GHDC-204ENST00000585375 STAC3Q96MF2 364 aa23.55■■□□□ 1.36
GHDC-204ENST00000585375 CFAP70Q5T0N1 1121 aa23.53■■□□□ 1.36
GHDC-204ENST00000585375 NPHP3Q7Z494 1330 aa23.53■■□□□ 1.36
GHDC-204ENST00000585375 PLEKHH1Q9ULM0 1364 aa23.52■■□□□ 1.36
GHDC-204ENST00000585375 NUTM2BA6NNL0 878 aaPredicted RBP23.52■■□□□ 1.36
GHDC-204ENST00000585375 NUTM2EB1AL46 878 aaPredicted RBP23.52■■□□□ 1.36
GHDC-204ENST00000585375 NUTM2AQ8IVF1 878 aaPredicted RBP23.52■■□□□ 1.36
GHDC-204ENST00000585375 FMN2Q9NZ56 1722 aa23.51■■□□□ 1.35
GHDC-204ENST00000585375 DLC1Q96QB1 1528 aa23.51■■□□□ 1.35
GHDC-204ENST00000585375 ESCO1Q5FWF5 840 aa23.5■■□□□ 1.35
GHDC-204ENST00000585375 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
GHDC-204ENST00000585375 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
GHDC-204ENST00000585375 PXDNQ92626 1479 aa23.47■■□□□ 1.35
GHDC-204ENST00000585375 KIF1AQ12756 1690 aa23.47■■□□□ 1.35
GHDC-204ENST00000585375 AFF2P51816 1311 aa23.44■■□□□ 1.34
GHDC-204ENST00000585375 DCAF11Q8TEB1 546 aa23.44■■□□□ 1.34
GHDC-204ENST00000585375 CDK12Q9NYV4 1490 aaPredicted RBP23.43■■□□□ 1.34
GHDC-204ENST00000585375 FOXO3O43524 673 aa23.42■■□□□ 1.34
GHDC-204ENST00000585375 PRAM1Q96QH2 718 aa23.42■■□□□ 1.34
GHDC-204ENST00000585375 ADGRB2O60241 1585 aa23.42■■□□□ 1.34
GHDC-204ENST00000585375 C8orf37Q96NL8 207 aa23.41■■□□□ 1.34
GHDC-204ENST00000585375 NUTM2FA1L443 756 aa23.4■■□□□ 1.34
GHDC-204ENST00000585375 RXRBP28702 533 aa23.4■■□□□ 1.34
GHDC-204ENST00000585375 KDM2AQ9Y2K7 1162 aa23.4■■□□□ 1.34
GHDC-204ENST00000585375 POGKQ9P215 609 aa23.39■■□□□ 1.33
GHDC-204ENST00000585375 ANKARQ7Z5J8 1434 aa23.38■■□□□ 1.33
GHDC-204ENST00000585375 ADAMTS2O95450 1211 aa23.36■■□□□ 1.33
GHDC-204ENST00000585375 NGLY1Q96IV0 654 aa23.36■■□□□ 1.33
GHDC-204ENST00000585375 RGPD8O14715 1765 aaPredicted RBP23.35■■□□□ 1.33
GHDC-204ENST00000585375 EIF3AQ14152 1382 aaKnown RBP23.35■■□□□ 1.33
GHDC-204ENST00000585375 XPCQ01831 940 aaPredicted RBP23.34■■□□□ 1.33
GHDC-204ENST00000585375 SAFB2Q14151 953 aaKnown RBP eCLIP23.34■■□□□ 1.33
GHDC-204ENST00000585375 PHF8Q9UPP1 1060 aa23.34■■□□□ 1.33
GHDC-204ENST00000585375 TRAK1Q9UPV9 953 aa23.34■■□□□ 1.33
GHDC-204ENST00000585375 SPATA31A3Q5VYP0 1347 aa23.33■■□□□ 1.33
GHDC-204ENST00000585375 MARF1Q9Y4F3 1742 aaKnown RBP23.33■■□□□ 1.32
GHDC-204ENST00000585375 RBM6P78332 1123 aaKnown RBP23.32■■□□□ 1.32
GHDC-204ENST00000585375 FNBP4Q8N3X1 1017 aaPredicted RBP23.32■■□□□ 1.32
GHDC-204ENST00000585375 QTRT2Q9H974 415 aaKnown RBP23.32■■□□□ 1.32
GHDC-204ENST00000585375 KIAA1210Q9ULL0 1709 aa23.32■■□□□ 1.32
GHDC-204ENST00000585375 USP32Q8NFA0 1604 aa23.32■■□□□ 1.32
GHDC-204ENST00000585375 KRT28Q7Z3Y7 464 aa23.31■■□□□ 1.32
GHDC-204ENST00000585375 PSME1Q06323 249 aa23.3■■□□□ 1.32
GHDC-204ENST00000585375 ARHGEF28Q8N1W1 1705 aaKnown RBP23.3■■□□□ 1.32
GHDC-204ENST00000585375 TULP4Q9NRJ4 1543 aa23.29■■□□□ 1.32
GHDC-204ENST00000585375 TNS3Q68CZ2 1445 aa23.29■■□□□ 1.32
GHDC-204ENST00000585375 USP21Q9UK80 565 aa23.29■■□□□ 1.32
GHDC-204ENST00000585375 SBNO1A3KN83 1393 aa23.28■■□□□ 1.32
GHDC-204ENST00000585375 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
GHDC-204ENST00000585375 RGS12O14924 1447 aa23.26■■□□□ 1.31
GHDC-204ENST00000585375 MINK1Q8N4C8 1332 aaPredicted RBP23.26■■□□□ 1.31
GHDC-204ENST00000585375 ATRNO75882 1429 aa23.25■■□□□ 1.31
GHDC-204ENST00000585375 WASLO00401 505 aaPredicted RBP23.25■■□□□ 1.31
GHDC-204ENST00000585375 ARHGEF10O15013 1369 aa23.25■■□□□ 1.31
GHDC-204ENST00000585375 HIRIP3Q9BW71 556 aaPredicted RBP23.24■■□□□ 1.31
GHDC-204ENST00000585375 BCL9LQ86UU0 1499 aa23.23■■□□□ 1.31
GHDC-204ENST00000585375 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.22■■□□□ 1.31
GHDC-204ENST00000585375 UPF1Q92900 1129 aaKnown RBP eCLIP23.22■■□□□ 1.31
GHDC-204ENST00000585375 TRIM26Q12899 539 aaPredicted RBP23.21■■□□□ 1.31
GHDC-204ENST00000585375 PRR36Q9H6K5 1346 aa23.21■■□□□ 1.31
GHDC-204ENST00000585375 ITSN1Q15811 1721 aa23.2■■□□□ 1.3
GHDC-204ENST00000585375 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
GHDC-204ENST00000585375 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
GHDC-204ENST00000585375 SLIT2O94813 1529 aa23.19■■□□□ 1.3
GHDC-204ENST00000585375 GPRASP1Q5JY77 1395 aa23.19■■□□□ 1.3
GHDC-204ENST00000585375 ABCA3Q99758 1704 aa23.19■■□□□ 1.3
GHDC-204ENST00000585375 ATP7BP35670 1465 aa23.17■■□□□ 1.3
GHDC-204ENST00000585375 HAP1P54257 671 aaPredicted RBP23.16■■□□□ 1.3
GHDC-204ENST00000585375 ALS2Q96Q42 1657 aa23.16■■□□□ 1.3
GHDC-204ENST00000585375 UNC5CLQ8IV45 518 aa23.14■■□□□ 1.29
GHDC-204ENST00000585375 NWD2Q9ULI1 1742 aa23.13■■□□□ 1.29
GHDC-204ENST00000585375 NBPF1Q3BBV0 1214 aa23.13■■□□□ 1.29
GHDC-204ENST00000585375 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
GHDC-204ENST00000585375 GJD4Q96KN9 370 aaPredicted RBP23.13■■□□□ 1.29
GHDC-204ENST00000585375 NGDNQ8NEJ9 315 aaKnown RBP23.12■■□□□ 1.29
GHDC-204ENST00000585375 NUDT16Q96DE0 195 aaKnown RBP23.12■■□□□ 1.29
GHDC-204ENST00000585375 TOPAZ1Q8N9V7 1692 aa23.12■■□□□ 1.29
GHDC-204ENST00000585375 CABLES1Q8TDN4 633 aa23.11■■□□□ 1.29
GHDC-204ENST00000585375 L3MBTL2Q969R5 705 aa23.11■■□□□ 1.29
GHDC-204ENST00000585375 ATAD2Q6PL18 1390 aa23.11■■□□□ 1.29
GHDC-204ENST00000585375 PLCH1Q4KWH8 1693 aa23.1■■□□□ 1.29
GHDC-204ENST00000585375 CDK19Q9BWU1 502 aa23.1■■□□□ 1.29
GHDC-204ENST00000585375 CENPJQ9HC77 1338 aaPredicted RBP23.08■■□□□ 1.29
GHDC-204ENST00000585375 CCDC61Q9Y6R9 512 aa23.08■■□□□ 1.29
GHDC-204ENST00000585375 POLR3AO14802 1390 aaPredicted RBP23.08■■□□□ 1.29
GHDC-204ENST00000585375 RALGAPBQ86X10 1494 aa23.08■■□□□ 1.29
GHDC-204ENST00000585375 GLI3P10071 1580 aa23.07■■□□□ 1.28
GHDC-204ENST00000585375 CRYBG1Q9Y4K1 1723 aa23.07■■□□□ 1.28
GHDC-204ENST00000585375 TRPM1Q7Z4N2 1603 aa23.07■■□□□ 1.28
GHDC-204ENST00000585375 SIN3AQ96ST3 1273 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms