RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 NGEFQ8N5V2 710 aa17.26■□□□□ 0.35
CSNK1D-222ENST00000584377 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
CSNK1D-222ENST00000584377 NEXMIFQ5QGS0 1516 aa17.26■□□□□ 0.35
CSNK1D-222ENST00000584377 GLI2P10070 1586 aa17.26■□□□□ 0.35
CSNK1D-222ENST00000584377 MS4A1P11836 297 aa17.26■□□□□ 0.35
CSNK1D-222ENST00000584377 TNNT2P45379 298 aaPredicted RBP17.26■□□□□ 0.35
CSNK1D-222ENST00000584377 IDI1Q13907 227 aa17.26■□□□□ 0.35
CSNK1D-222ENST00000584377 E9PSI1 815 aa17.25■□□□□ 0.35
CSNK1D-222ENST00000584377 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
CSNK1D-222ENST00000584377 YEATS2Q9ULM3 1422 aa17.25■□□□□ 0.35
CSNK1D-222ENST00000584377 RICTORQ6R327 1708 aa17.25■□□□□ 0.35
CSNK1D-222ENST00000584377 NKTRP30414 1462 aaKnown RBP17.25■□□□□ 0.35
CSNK1D-222ENST00000584377 PDE4AP27815 886 aa17.24■□□□□ 0.35
CSNK1D-222ENST00000584377 SLC52A1Q9NWF4 448 aa17.24■□□□□ 0.35
CSNK1D-222ENST00000584377 CGNL1Q0VF96 1302 aa17.24■□□□□ 0.35
CSNK1D-222ENST00000584377 PUS7Q96PZ0 661 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-222ENST00000584377 BACH2Q9BYV9 841 aa17.21■□□□□ 0.35
CSNK1D-222ENST00000584377 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
CSNK1D-222ENST00000584377 ARHGEF28Q8N1W1 1705 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-222ENST00000584377 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.35
CSNK1D-222ENST00000584377 USP32Q8NFA0 1604 aa17.2■□□□□ 0.34
CSNK1D-222ENST00000584377 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
CSNK1D-222ENST00000584377 ANKRD36BQ8N2N9 1353 aa17.2■□□□□ 0.34
CSNK1D-222ENST00000584377 ZFYVE9O95405 1425 aa17.2■□□□□ 0.34
CSNK1D-222ENST00000584377 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
CSNK1D-222ENST00000584377 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
CSNK1D-222ENST00000584377 SKAP1Q86WV1 359 aa17.19■□□□□ 0.34
CSNK1D-222ENST00000584377 CABP2Q9NPB3 220 aa17.19■□□□□ 0.34
CSNK1D-222ENST00000584377 MTHFSP49914 203 aa17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 BCAR3O75815 825 aa17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 SENP3Q9H4L4 574 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 SHPRHQ149N8 1683 aa17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 NPM2Q86SE8 214 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 RUNDC1Q96C34 613 aa17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 CFAP53Q96M91 514 aa17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 STK26Q9P289 416 aa17.18■□□□□ 0.34
CSNK1D-222ENST00000584377 NSD2O96028 1365 aa17.16■□□□□ 0.34
CSNK1D-222ENST00000584377 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
CSNK1D-222ENST00000584377 PREX1Q8TCU6 1659 aa17.15■□□□□ 0.34
CSNK1D-222ENST00000584377 TCP11L2Q8N4U5 519 aa17.14■□□□□ 0.34
CSNK1D-222ENST00000584377 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.34
CSNK1D-222ENST00000584377 SRPK2P78362 688 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-222ENST00000584377 TMEM131LA2VDJ0 1609 aa17.14■□□□□ 0.33
CSNK1D-222ENST00000584377 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
CSNK1D-222ENST00000584377 FBXO31Q5XUX0 539 aaPredicted RBP17.13■□□□□ 0.33
CSNK1D-222ENST00000584377 MYO5BQ9ULV0 1848 aa17.12■□□□□ 0.33
CSNK1D-222ENST00000584377 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
CSNK1D-222ENST00000584377 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
CSNK1D-222ENST00000584377 FAM69CQ0P6D2 419 aa17.11■□□□□ 0.33
CSNK1D-222ENST00000584377 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
CSNK1D-222ENST00000584377 NEFMP07197 916 aa17.11■□□□□ 0.33
CSNK1D-222ENST00000584377 PRAM1Q96QH2 718 aa17.11■□□□□ 0.33
CSNK1D-222ENST00000584377 USP35Q9P2H5 1018 aa17.11■□□□□ 0.33
CSNK1D-222ENST00000584377 PTPRMP28827 1452 aa17.1■□□□□ 0.33
CSNK1D-222ENST00000584377 POGKQ9P215 609 aa17.1■□□□□ 0.33
CSNK1D-222ENST00000584377 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-222ENST00000584377 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
CSNK1D-222ENST00000584377 CANXP27824 592 aaKnown RBP17.1■□□□□ 0.33
CSNK1D-222ENST00000584377 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
CSNK1D-222ENST00000584377 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-222ENST00000584377 U2AF1L5P0DN76 240 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-222ENST00000584377 U2AF1Q01081 240 aaKnown RBP eCLIP17.09■□□□□ 0.336e-7■□□□□ 10.7
CSNK1D-222ENST00000584377 WDR63Q8IWG1 891 aa17.09■□□□□ 0.33
CSNK1D-222ENST00000584377 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
CSNK1D-222ENST00000584377 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
CSNK1D-222ENST00000584377 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.33
CSNK1D-222ENST00000584377 CCDC27Q2M243 656 aa17.08■□□□□ 0.32
CSNK1D-222ENST00000584377 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
CSNK1D-222ENST00000584377 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
CSNK1D-222ENST00000584377 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-222ENST00000584377 RARSP54136 660 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-222ENST00000584377 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-222ENST00000584377 PANK1Q8TE04 598 aa17.05■□□□□ 0.32
CSNK1D-222ENST00000584377 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-222ENST00000584377 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
CSNK1D-222ENST00000584377 COG6Q9Y2V7 657 aa17.04■□□□□ 0.32
CSNK1D-222ENST00000584377 DIP2BQ9P265 1576 aa17.04■□□□□ 0.32
CSNK1D-222ENST00000584377 ALKQ9UM73 1620 aa17.04■□□□□ 0.32
CSNK1D-222ENST00000584377 FYB1O15117 783 aa17.03■□□□□ 0.32
CSNK1D-222ENST00000584377 RGS3P49796 1198 aa17.03■□□□□ 0.32
CSNK1D-222ENST00000584377 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
CSNK1D-222ENST00000584377 CLUAP1Q96AJ1 413 aa17.03■□□□□ 0.32
CSNK1D-222ENST00000584377 MYH16Q9H6N6 1097 aa17.03■□□□□ 0.32
CSNK1D-222ENST00000584377 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
CSNK1D-222ENST00000584377 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-222ENST00000584377 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
CSNK1D-222ENST00000584377 CD163L1Q9NR16 1453 aa17.02■□□□□ 0.32
CSNK1D-222ENST00000584377 CLTCQ00610 1675 aaKnown RBP17.02■□□□□ 0.31
CSNK1D-222ENST00000584377 HDGFL2Q7Z4V5 671 aaPredicted RBP17.02■□□□□ 0.31
CSNK1D-222ENST00000584377 IGHDP01880 384 aa17.01■□□□□ 0.31
CSNK1D-222ENST00000584377 AGLP35573 1532 aa17.01■□□□□ 0.31
CSNK1D-222ENST00000584377 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
CSNK1D-222ENST00000584377 C8orf34Q49A92 452 aa17■□□□□ 0.31
CSNK1D-222ENST00000584377 ADGRB2O60241 1585 aa17■□□□□ 0.31
CSNK1D-222ENST00000584377 TSPOAP1O95153 1857 aa17■□□□□ 0.31
CSNK1D-222ENST00000584377 MED14O60244 1454 aa17■□□□□ 0.31
CSNK1D-222ENST00000584377 DDRGK1Q96HY6 314 aa17■□□□□ 0.31
CSNK1D-222ENST00000584377 ARHGEF40Q8TER5 1519 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms